SWISS-MODEL Homology Modelling Report

Model Building Report

This document lists the results for the homology modelling project "Q9HVD0" submitted to SWISS-MODEL workspace on Oct. 17, 2017, 7:14 p.m..The submitted primary amino acid sequence is given in Table T1.

If you use any results in your research, please cite the relevant publications:

Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano Gallo Cassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede. (2014). SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Research (1 July 2014) 42 (W1): W252-W258; doi: 10.1093/nar/gku340.
Arnold, K., Bordoli, L., Kopp, J. and Schwede, T. (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics, 22, 195-201.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350

Results

The SWISS-MODEL template library (SMTL version 2017-10-11, PDB release 2017-10-06) was searched with Blast (Altschul et al., 1997) and HHBlits (Remmert, et al., 2011) for evolutionary related structures matching the target sequence in Table T1. For details on the template search, see Materials and Methods. Overall 636 templates were found (Table T2).

Models

The following model was built (see Materials and Methods "Model Building"):

Model #01

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER (matching prediction)
1 x DGL: D-GLUTAMIC ACID;
0.74-1.47
QMEAN-1.47
-0.60
All Atom0.35
Solvation0.20
Torsion-1.49
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
5ijw.1.A40.15homo-dimerHHblitsX-ray1.76Å0.38 1 - 261 0.98Glutamate racemase
LigandAdded to ModelDescription
DGL
D-GLUTAMIC ACID
DGL✕ - Binding site not conserved.
D-GLUTAMIC ACID
IOD✕ - Not biologically relevant.
IODIDE ION
IOD✕ - Not biologically relevant.
IODIDE ION
IOD✕ - Not biologically relevant.
IODIDE ION

Target    MAVESAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQGAKALVLACNTATA
5ijw.1.A MSDRLAPIGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHSLAIGDDLVSRGVKALVIACNTASS

Target AAAAELRERYPQ-VPLVAM-EPAVKPAAAATRNGRVGVLATTGTLKSARFAALLDRFASDVQVFTQPCPGLVERIEAGDL
5ijw.1.A ACLRDARERY-SPVPVVEVILPAVRRAVAATRNGRIGVIGTQATIASGAYQDAFAA-ARDTEVFTVACPRFVDFVERGVT

Target YGPQTRALLERLLAPILEQGCDTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASG--Q---AA
5ijw.1.A SGRQVLGLAEGYLEPLQLAEVDTLVLGCTHYPMLSGLIQLAMGDNVTLVSSAEETAKDLLRVLTELDLLRPHPDDPSVTA

Target TPRFWTSALPEEMERILPILWGSPE-SVGKLVV
5ijw.1.A VRRFEATGDPEAFTALAARFLGPTLDGVR----




Materials and Methods

Template Search

Template search with Blast and HHBlits has been performed against the SWISS-MODEL template library (SMTL, last update: 2017-10-11, last included PDB release: 2017-10-06).

The target sequence was searched with BLAST (Altschul et al., 1997) against the primary amino acid sequence contained in the SMTL. A total of 37 templates were found.

An initial HHblits profile has been built using the procedure outlined in (Remmert, et al., 2011), followed by 1 iteration of HHblits against NR20. The obtained profile has then be searched against all profiles of the SMTL. A total of 603 templates were found.

Template Selection

For each identified template, the template's quality has been predicted from features of the target-template alignment. The templates with the highest quality have then been selected for model building.

Model Building

Models are built based on the target-template alignment using ProMod3. Coordinates which are conserved between the target and the template are copied from the template to the model. Insertions and deletions are remodelled using a fragment library. Side chains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field. In case loop modelling with ProMod3 fails, an alternative model is built with PROMOD-II (Guex, et al., 1997).

Model Quality Estimation

The global and per-residue model quality has been assessed using the QMEAN scoring function (Benkert, et al., 2011) . For improved performance, weights of the individual QMEAN terms have been trained specifically for SWISS-MODEL.

Ligand Modelling

Ligands present in the template structure are transferred by homology to the model when the following criteria are met (Gallo -Casserino, to be published): (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contact with the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between the target and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The model summary includes information on why and which ligand has not been included.

Oligomeric State Conservation

Homo-oligomeric structure of the target protein is predicted based on the analysis of pairwise interfaces of the identified template structures. For each relevant interface between polypeptide chains (interfaces with more than 10 residue-residue interactions), the QscoreOligomer (Mariani et al., 2011) is predicted from features such as similarity to target and frequency of observing this interface in the identified templates (Kiefer, Bertoni, Biasini, to be published). The prediction is performed with a random forest regressor using these features as input parameters to predict the probability of conservation for each interface. The QscoreOligomer of the whole complex is then calculated as the weight-averaged QscoreOligomer of the interfaces. The oligomeric state of the target is predicted to be the same as in the template when QscoreOligomer is predicted to be higher or equal to 0.5.

References

Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25, 3389-3402.
Remmert, M., Biegert, A., Hauser, A. and Soding, J. (2012) HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nat Methods, 9, 173-175.
Guex, N. and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis, 18, 2714-2723.
Sali, A. and Blundell, T.L. (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol, 234, 779-815.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350.
Mariani, V., Kiefer, F., Schmidt, T., Haas, J. and Schwede, T. (2011) Assessment of template based protein structure predictions in CASP9. Proteins, 79 Suppl 10, 37-58.

Table T1:

Primary amino acid sequence for which templates were searched and models were built.

MAVESAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRERCERIGDFLLEQGAKALVLACNTATAAAAAELRERYPQVPLVAMEP
AVKPAAAATRNGRVGVLATTGTLKSARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYGPQTRALLERLLAPILEQGCDTLILGCTHYPFVKPLLAELI
PAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWTSALPEEMERILPILWGSPESVGKLVV

Table T2:

TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityCoverageDescription
5ijw.1.A40.15homo-dimerHHblitsX-ray1.76Å0.380.98Glutamate racemase
5ijw.1.B40.15homo-dimerHHblitsX-ray1.76Å0.380.98Glutamate racemase
3hfr.1.A34.36homo-dimerHHblitsX-ray2.30Å0.380.98Glutamate racemase
3hfr.1.B34.36homo-dimerHHblitsX-ray2.30Å0.380.98Glutamate racemase
2vvt.1.A32.43homo-dimerHHblitsX-ray1.65Å0.370.98GLUTAMATE RACEMASE
2vvt.1.B32.43homo-dimerHHblitsX-ray1.65Å0.370.98GLUTAMATE RACEMASE
5hj7.1.A39.06homo-dimerHHblitsX-ray2.30Å0.380.97Glutamate racemase
2jfp.1.A32.56homo-dimerHHblitsX-ray1.98Å0.370.97GLUTAMATE RACEMASE
2jfo.1.B32.56homo-dimerHHblitsX-ray2.50Å0.370.97GLUTAMATE RACEMASE
2gzm.1.A32.95homo-dimerHHblitsX-ray1.99Å0.370.97Glutamate racemase
2gzm.1.B32.95homo-dimerHHblitsX-ray1.99Å0.370.97Glutamate racemase
2gzm.2.B32.95homo-dimerHHblitsX-ray1.99Å0.370.97Glutamate racemase
2jfw.1.A33.07homo-dimerHHblitsX-ray2.00Å0.370.97GLUTAMATE RACEMASE
1zuw.1.A32.56homo-dimerHHblitsX-ray1.75Å0.370.97glutamate racemase 1
1zuw.1.B32.56homo-dimerHHblitsX-ray1.75Å0.370.97glutamate racemase 1
2dwu.1.A32.56homo-dimerHHblitsX-ray1.60Å0.370.97Glutamate racemase
2dwu.2.A32.56homo-dimerHHblitsX-ray1.60Å0.370.97Glutamate racemase
2ohv.1.A32.30homo-dimerHHblitsX-ray2.50Å0.370.97Glutamate Racemase
2ohg.1.A32.30homo-dimerHHblitsX-ray2.50Å0.370.97Glutamate racemase
2oho.1.A32.42homo-dimerHHblitsX-ray2.25Å0.370.97Glutamate Racemase
2oho.1.B32.42homo-dimerHHblitsX-ray2.25Å0.370.97Glutamate Racemase
5hj7.1.A41.87homo-dimerBLASTX-ray2.30Å0.400.93Glutamate racemase
2jfq.1.A32.03homo-dimerHHblitsX-ray2.15Å0.360.97GLUTAMATE RACEMASE
2jfq.1.B32.03homo-dimerHHblitsX-ray2.15Å0.360.97GLUTAMATE RACEMASE
2oho.1.A33.60homo-dimerBLASTX-ray2.25Å0.370.94Glutamate Racemase
2oho.1.B33.60homo-dimerBLASTX-ray2.25Å0.370.94Glutamate Racemase
2jfn.1.A39.36monomerHHblitsX-ray1.90Å0.370.94GLUTAMATE RACEMASE
2ohv.1.A33.33homo-dimerBLASTX-ray2.50Å0.370.94Glutamate Racemase
2ohg.1.A33.33homo-dimerBLASTX-ray2.50Å0.370.94Glutamate racemase
2jfn.1.A42.39monomerBLASTX-ray1.90Å0.390.92GLUTAMATE RACEMASE
1zuw.1.A34.01homo-dimerBLASTX-ray1.75Å0.370.93glutamate racemase 1
1zuw.1.B34.01homo-dimerBLASTX-ray1.75Å0.370.93glutamate racemase 1
2vvt.1.A34.57homo-dimerBLASTX-ray1.65Å0.380.92GLUTAMATE RACEMASE
2vvt.1.B34.57homo-dimerBLASTX-ray1.65Å0.380.92GLUTAMATE RACEMASE
2jfp.1.A34.57homo-dimerBLASTX-ray1.98Å0.380.92GLUTAMATE RACEMASE
2jfo.1.B34.57homo-dimerBLASTX-ray2.50Å0.380.92GLUTAMATE RACEMASE
1b73.1.A34.02homo-dimerHHblitsX-ray2.30Å0.370.92GLUTAMATE RACEMASE
2jfw.1.A34.30homo-dimerBLASTX-ray2.00Å0.380.91GLUTAMATE RACEMASE
2dwu.1.A32.52homo-dimerBLASTX-ray1.60Å0.360.93Glutamate racemase
2dwu.2.A32.52homo-dimerBLASTX-ray1.60Å0.360.93Glutamate racemase
3out.1.A28.86homo-hexamerHHblitsX-ray1.65Å0.360.93Glutamate racemase
2jfq.1.A33.74homo-dimerBLASTX-ray2.15Å0.360.92GLUTAMATE RACEMASE
2jfq.1.B33.74homo-dimerBLASTX-ray2.15Å0.360.92GLUTAMATE RACEMASE
1b73.1.A34.87homo-dimerBLASTX-ray2.30Å0.380.90GLUTAMATE RACEMASE
3hfr.1.A36.60homo-dimerBLASTX-ray2.30Å0.390.89Glutamate racemase
3hfr.1.B36.60homo-dimerBLASTX-ray2.30Å0.390.89Glutamate racemase
2gzm.1.A33.19homo-dimerBLASTX-ray1.99Å0.370.89Glutamate racemase
2gzm.1.B33.19homo-dimerBLASTX-ray1.99Å0.370.89Glutamate racemase
2gzm.2.B33.19homo-dimerBLASTX-ray1.99Å0.370.89Glutamate racemase
5ijw.1.A43.75homo-dimerBLASTX-ray1.76Å0.400.85Glutamate racemase
5ijw.1.B43.75homo-dimerBLASTX-ray1.76Å0.400.85Glutamate racemase
3uho.1.A28.51monomerHHblitsX-ray2.20Å0.340.91Glutamate racemase
3uhf.2.A28.51monomerHHblitsX-ray1.83Å0.340.91Glutamate racemase
3uhp.1.A28.51monomerHHblitsX-ray2.79Å0.340.91Glutamate racemase
2jfy.1.B26.12homo-dimerHHblitsX-ray1.90Å0.330.92GLUTAMATE RACEMASE
2jfz.1.A26.12homo-dimerHHblitsX-ray1.86Å0.330.92GLUTAMATE RACEMASE
2jfx.1.A26.12homo-dimerHHblitsX-ray2.30Å0.330.92GLUTAMATE RACEMASE
2jfx.1.B26.12homo-dimerHHblitsX-ray2.30Å0.330.92GLUTAMATE RACEMASE
2jfy.1.A26.12homo-dimerHHblitsX-ray1.90Å0.330.92GLUTAMATE RACEMASE
4b1f.1.B26.12homo-dimerHHblitsX-ray2.05Å0.330.92GLUTAMATE RACEMASE
2w4i.1.A26.12homo-tetramerHHblitsX-ray1.87Å0.330.92GLUTAMATE RACEMASE
5w1q.1.A26.12homo-dimerHHblitsX-ray1.95Å0.330.92Glutamate racemase
3uho.1.A31.78monomerBLASTX-ray2.20Å0.360.89Glutamate racemase
3uhf.2.A31.78monomerBLASTX-ray1.83Å0.360.89Glutamate racemase
3uhp.1.A31.78monomerBLASTX-ray2.79Å0.360.89Glutamate racemase
3out.1.A31.03homo-hexamerBLASTX-ray1.65Å0.370.88Glutamate racemase
5w1q.1.A28.84homo-dimerBLASTX-ray1.95Å0.340.81Glutamate racemase
2jfy.1.B31.73homo-dimerBLASTX-ray1.90Å0.360.78GLUTAMATE RACEMASE
2jfz.1.A31.73homo-dimerBLASTX-ray1.86Å0.360.78GLUTAMATE RACEMASE
2jfx.1.A31.73homo-dimerBLASTX-ray2.30Å0.360.78GLUTAMATE RACEMASE
2jfx.1.B31.73homo-dimerBLASTX-ray2.30Å0.360.78GLUTAMATE RACEMASE
2jfy.1.A31.73homo-dimerBLASTX-ray1.90Å0.360.78GLUTAMATE RACEMASE
4b1f.1.B31.73homo-dimerBLASTX-ray2.05Å0.360.78GLUTAMATE RACEMASE
2w4i.1.A31.73homo-tetramerBLASTX-ray1.87Å0.360.78GLUTAMATE RACEMASE
1jfl.1.A24.02homo-dimerHHblitsX-ray1.90Å0.320.77ASPARTATE RACEMASE
5b19.1.A22.12homo-dimerHHblitsX-ray1.85Å0.310.78Aspartate racemase
5b19.1.B22.12homo-dimerHHblitsX-ray1.85Å0.310.78Aspartate racemase
2dx7.1.A23.53homo-dimerHHblitsX-ray2.00Å0.320.77aspartate racemase
2dx7.1.B23.53homo-dimerHHblitsX-ray2.00Å0.320.77aspartate racemase
3s81.1.A20.59homo-dimerHHblitsX-ray1.80Å0.310.77Putative aspartate racemase
5ell.1.A18.84homo-dimerHHblitsX-ray1.80Å0.300.78Asp/Glu_racemase family protein
5ell.1.B18.84homo-dimerHHblitsX-ray1.80Å0.300.78Asp/Glu_racemase family protein
5hqt.1.A18.93homo-dimerHHblitsX-ray1.60Å0.300.78aspartate/glutamate racemase
2eq5.1.A20.49homo-dimerHHblitsX-ray2.20Å0.290.77228aa long hypothetical hydantoin racemase
2eq5.2.B20.49homo-dimerHHblitsX-ray2.20Å0.290.77228aa long hypothetical hydantoin racemase
3ojc.1.A18.72homo-tetramerHHblitsX-ray1.75Å0.300.77Putative aspartate/glutamate racemase
3ojc.1.B18.72homo-tetramerHHblitsX-ray1.75Å0.300.77Putative aspartate/glutamate racemase
3ojc.1.C18.72homo-tetramerHHblitsX-ray1.75Å0.300.77Putative aspartate/glutamate racemase
3ojc.1.D18.72homo-tetramerHHblitsX-ray1.75Å0.300.77Putative aspartate/glutamate racemase
5elm.1.A18.05homo-dimerHHblitsX-ray2.00Å0.290.77Asp/Glu_racemase family protein
5elm.1.B18.05homo-dimerHHblitsX-ray2.00Å0.290.77Asp/Glu_racemase family protein
5elm.2.A18.05homo-dimerHHblitsX-ray2.00Å0.290.77Asp/Glu_racemase family protein
5elm.2.B18.05homo-dimerHHblitsX-ray2.00Å0.290.77Asp/Glu_racemase family protein
2zsk.1.A19.31homo-dimerHHblitsX-ray2.55Å0.300.76226aa long hypothetical aspartate racemase
4fq7.1.A16.02homo-tetramerHHblitsX-ray3.00Å0.280.78Maleate cis-trans isomerase
4fq5.1.A15.05homo-tetramerHHblitsX-ray2.10Å0.280.78Maleate cis-trans isomerase
4fq5.1.B15.05homo-tetramerHHblitsX-ray2.10Å0.280.78Maleate cis-trans isomerase
2dgd.1.A14.49homo-octamerHHblitsX-ray2.90Å0.270.78223aa long hypothetical arylmalonate decarboxylase
2xed.1.A14.01monomerHHblitsX-ray1.95Å0.270.78PUTATIVE MALEATE ISOMERASE
2xec.1.A14.56homo-dimerHHblitsX-ray2.20Å0.270.78PUTATIVE MALEATE ISOMERASE
3qvj.1.A18.81homo-hexamerHHblitsX-ray2.10Å0.280.76Putative hydantoin racemase
3qvl.1.A17.82homo-hexamerHHblitsX-ray1.82Å0.280.76Putative hydantoin racemase
4ix1.1.A14.08homo-dimerHHblitsX-ray2.80Å0.260.78hypothetical protein
4ix1.1.B14.08homo-dimerHHblitsX-ray2.80Å0.260.78hypothetical protein
5lfd.1.A16.50homo-hexamerHHblitsX-ray2.15Å0.270.75Allantoin racemase
4rs3.1.A15.00monomerHHblitsX-ray1.40Å0.270.75ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, periplasmic sugar-binding protein
4yv7.1.A13.43monomerHHblitsX-ray2.30Å0.270.76Periplasmic binding protein/LacI transcriptional regulator
4wzz.1.A9.36monomerHHblitsX-ray1.70Å0.260.77Putative sugar ABC transporter, substrate-binding protein
4zjp.1.A12.94monomerHHblitsX-ray1.63Å0.260.76Monosaccharide-transporting ATPase
3ixm.1.A17.59monomerHHblitsX-ray1.90Å0.270.75Arylmalonate decarboxylase
5ix8.1.A11.33monomerHHblitsX-ray1.60Å0.250.77Putative sugar ABC transport system, substrate-binding protein
3dg9.1.A17.09monomerHHblitsX-ray1.50Å0.270.75Arylmalonate decarboxylase
3dtv.3.A17.09monomerHHblitsX-ray2.10Å0.260.75Arylmalonate decarboxylase
3dtv.2.A17.09monomerHHblitsX-ray2.10Å0.260.75Arylmalonate decarboxylase
3dtv.1.A17.09monomerHHblitsX-ray2.10Å0.260.75Arylmalonate decarboxylase
3dtv.4.A17.09monomerHHblitsX-ray2.10Å0.260.75Arylmalonate decarboxylase
3eis.1.A17.09monomerHHblitsX-ray2.10Å0.260.75Arylmalonate decarboxylase
3eis.2.A17.09monomerHHblitsX-ray2.10Å0.260.75Arylmalonate decarboxylase
3hzr.1.A11.79homo-dimerHHblitsX-ray3.00Å0.280.74Tryptophanyl-tRNA synthetase
2vlb.1.A16.58monomerHHblitsX-ray1.92Å0.260.75ARYLMALONATE DECARBOXYLASE
2vlb.2.A16.58monomerHHblitsX-ray1.92Å0.260.75ARYLMALONATE DECARBOXYLASE
2vlb.3.A16.58monomerHHblitsX-ray1.92Å0.260.75ARYLMALONATE DECARBOXYLASE
2vlb.4.A16.58monomerHHblitsX-ray1.92Å0.260.75ARYLMALONATE DECARBOXYLASE
3ixl.1.A16.67monomerHHblitsX-ray1.45Å0.270.75Arylmalonate decarboxylase
3ctp.1.A11.73homo-dimerHHblitsX-ray1.41Å0.260.74Periplasmic binding protein/LacI transcriptional regulator
2q5c.1.A10.71monomerHHblitsX-ray1.49Å0.260.63NtrC family transcriptional regulator
1gpw.1.A15.82hetero-oligomerHHblitsX-ray2.40Å0.290.60HISF PROTEIN
1gpw.3.A15.82hetero-oligomerHHblitsX-ray2.40Å0.290.60HISF PROTEIN
4fx7.1.A13.84monomerHHblitsX-ray2.08Å0.270.60Imidazole glycerol phosphate synthase subunit HisF
4ccz.1.A19.15monomerHHblitsX-ray2.70Å0.300.53METHIONINE SYNTHASE
5dmm.1.A17.27monomerHHblitsX-ray1.78Å0.260.52Homocysteine S-methyltransferase
5dmn.1.A17.27homo-dimerHHblitsX-ray2.89Å0.260.52Homocysteine S-methyltransferase
4f06.1.A16.42monomerHHblitsX-ray1.30Å0.280.51Extracellular ligand-binding receptor
3obb.1.A20.77homo-tetramerHHblitsX-ray2.20Å0.300.49Probable 3-hydroxyisobutyrate dehydrogenase
4evs.1.A14.29monomerHHblitsX-ray1.45Å0.280.50PUTATIVE ABC TRANSPORTER SUBUNIT, SUBSTRATE-BINDING COMPONENT
2iz1.1.B11.19homo-dimerHHblitsX-ray2.30Å0.260.516-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING
2iz1.1.A11.19homo-dimerHHblitsX-ray2.30Å0.260.516-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING
3lp8.1.A12.98monomerHHblitsX-ray2.15Å0.270.49Phosphoribosylamine-glycine ligase
3pef.1.A13.85homo-tetramerHHblitsX-ray2.07Å0.270.496-phosphogluconate dehydrogenase, NAD-binding
3pef.2.C13.85homo-tetramerHHblitsX-ray2.07Å0.270.496-phosphogluconate dehydrogenase, NAD-binding
5a9r.1.A19.38homo-dimerHHblitsX-ray1.55Å0.280.49IMINE REDUCTASE
5a9s.1.A19.38hetero-oligomerHHblitsX-ray2.06Å0.280.49IMINE REDUCTASE
5fwn.1.B19.38homo-dimerHHblitsX-ray2.14Å0.280.49IMINE REDUCTASE
3pdu.1.A17.97homo-tetramerHHblitsX-ray1.89Å0.280.483-hydroxyisobutyrate dehydrogenase family protein
2gpw.1.A8.15monomerHHblitsX-ray2.20Å0.230.51Biotin carboxylase
2gpw.4.A8.15monomerHHblitsX-ray2.20Å0.230.51Biotin carboxylase
4mwa.1.A17.60homo-tetramerHHblitsX-ray1.85Å0.280.474-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.B17.60homo-tetramerHHblitsX-ray1.85Å0.280.474-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.C17.60homo-tetramerHHblitsX-ray1.85Å0.280.474-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.D17.60homo-tetramerHHblitsX-ray1.85Å0.280.474-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.B17.60homo-tetramerHHblitsX-ray1.85Å0.280.474-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.D17.60homo-tetramerHHblitsX-ray1.85Å0.280.474-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
3t95.1.A12.80monomerHHblitsX-ray1.75Å0.270.47Autoinducer 2-binding protein lsrB
3tdn.1.A13.60homo-dimerHHblitsX-ray1.40Å0.270.47FLR SYMMETRIC ALPHA-BETA TIM BARREL
3rot.1.A12.00homo-dimerHHblitsX-ray1.91Å0.260.47ABC sugar transporter, periplasmic sugar binding protein
3gbv.1.A10.48homo-dimerHHblitsX-ray2.20Å0.260.47Putative LacI-family transcriptional regulator
3gbv.1.B10.48homo-dimerHHblitsX-ray2.20Å0.260.47Putative LacI-family transcriptional regulator
4wxe.1.A15.70monomerHHblitsX-ray1.50Å0.280.46Transcriptional regulator, LacI family
4gj1.1.A17.74monomerHHblitsX-ray2.15Å0.260.471-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
4axk.1.A18.18monomerHHblitsX-ray2.25Å0.280.461-(5-PHOSPHORIBOSYL)-5-((5'-PHOSPHORIBOSYLAMINO) METHYLIDENEAMINO)IMIDAZOLE-4-CARBOXAMIDE ISOMERASE
4axk.2.A18.18monomerHHblitsX-ray2.25Å0.280.461-(5-PHOSPHORIBOSYL)-5-((5'-PHOSPHORIBOSYLAMINO) METHYLIDENEAMINO)IMIDAZOLE-4-CARBOXAMIDE ISOMERASE
4rk5.1.A15.70homo-dimerHHblitsX-ray1.35Å0.280.46Transcriptional regulator, LacI family
2y88.1.A16.39monomerHHblitsX-ray1.33Å0.260.46PHOSPHORIBOSYL ISOMERASE A
2y89.1.A16.39monomerHHblitsX-ray2.50Å0.260.46PHOSPHORIBOSYL ISOMERASE A
2y85.1.A16.39monomerHHblitsX-ray2.40Å0.260.46PHOSPHORIBOSYL ISOMERASE A
3zs4.1.A16.39monomerHHblitsX-ray1.90Å0.260.46PHOSPHORIBOSYL ISOMERASE A
5dn1.1.A18.49monomerHHblitsX-ray1.95Å0.280.45Phosphoribosyl isomerase A
2x30.1.A18.49monomerHHblitsX-ray1.95Å0.270.45PHOSPHORIBOSYL ISOMERASE A
4u28.1.A17.65monomerHHblitsX-ray1.33Å0.270.45Phosphoribosyl isomerase A
5ide.1.B9.09hetero-oligomerHHblitsEMNA0.250.46Glutamate receptor 3
5ide.1.D9.09hetero-oligomerHHblitsEMNA0.250.46Glutamate receptor 3
5idf.1.B9.09hetero-oligomerHHblitsEMNA0.250.46Glutamate receptor 3
5idf.1.D9.09hetero-oligomerHHblitsEMNA0.250.46Glutamate receptor 3
3g85.1.A11.02monomerHHblitsX-ray1.84Å0.260.45Transcriptional regulator (LacI family)
2lbp.1.A14.78monomerHHblitsX-ray2.40Å0.280.43LEUCINE-BINDING PROTEIN
1z16.1.A13.04monomerHHblitsX-ray1.72Å0.280.43Leu/Ile/Val-binding protein
1z15.1.A13.04monomerHHblitsX-ray1.70Å0.280.43Leu/Ile/Val-binding protein
1iu9.1.A25.00monomerHHblitsX-ray2.04Å0.330.39aspartate racemase
1jfl.1.A20.79homo-dimerHHblitsX-ray1.90Å0.310.38ASPARTATE RACEMASE
3s81.1.A15.69homo-dimerHHblitsX-ray1.80Å0.300.38Putative aspartate racemase
2pn1.1.A12.15homo-dimerHHblitsX-ray2.00Å0.260.40Carbamoylphosphate synthase large subunit
2dx7.1.A19.80homo-dimerHHblitsX-ray2.00Å0.300.38aspartate racemase
2dx7.1.B19.80homo-dimerHHblitsX-ray2.00Å0.300.38aspartate racemase
2w90.1.A11.32homo-dimerHHblitsX-ray2.20Å0.260.406-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING
2w90.1.B11.32homo-dimerHHblitsX-ray2.20Å0.260.406-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING
2jfq.1.A17.65homo-dimerHHblitsX-ray2.15Å0.290.38GLUTAMATE RACEMASE
2jfq.1.B17.65homo-dimerHHblitsX-ray2.15Å0.290.38GLUTAMATE RACEMASE
5hj7.1.A19.80homo-dimerHHblitsX-ray2.30Å0.300.38Glutamate racemase
3ojc.1.A9.62homo-tetramerHHblitsX-ray1.75Å0.270.39Putative aspartate/glutamate racemase
3ojc.1.B9.62homo-tetramerHHblitsX-ray1.75Å0.270.39Putative aspartate/glutamate racemase
3ojc.1.C9.62homo-tetramerHHblitsX-ray1.75Å0.270.39Putative aspartate/glutamate racemase
3ojc.1.D9.62homo-tetramerHHblitsX-ray1.75Å0.270.39Putative aspartate/glutamate racemase
5hqt.1.A12.62homo-dimerHHblitsX-ray1.60Å0.270.39aspartate/glutamate racemase
3g0o.1.A17.82homo-dimerHHblitsX-ray1.80Å0.290.383-hydroxyisobutyrate dehydrogenase
5elm.1.A13.59homo-dimerHHblitsX-ray2.00Å0.270.39Asp/Glu_racemase family protein
5elm.1.B13.59homo-dimerHHblitsX-ray2.00Å0.270.39Asp/Glu_racemase family protein
5elm.2.A13.59homo-dimerHHblitsX-ray2.00Å0.270.39Asp/Glu_racemase family protein
5elm.2.B13.59homo-dimerHHblitsX-ray2.00Å0.270.39Asp/Glu_racemase family protein
5ell.1.A11.65homo-dimerHHblitsX-ray1.80Å0.270.39Asp/Glu_racemase family protein
5ell.1.B11.65homo-dimerHHblitsX-ray1.80Å0.270.39Asp/Glu_racemase family protein
3qvl.1.A17.48homo-hexamerHHblitsX-ray1.82Å0.270.39Putative hydantoin racemase
5ijw.1.A18.81homo-dimerHHblitsX-ray1.76Å0.280.38Glutamate racemase
5ijw.1.B18.81homo-dimerHHblitsX-ray1.76Å0.280.38Glutamate racemase
5lfd.1.A20.20homo-hexamerHHblitsX-ray2.15Å0.290.37Allantoin racemase
3q3c.1.A17.00homo-tetramerHHblitsX-ray2.30Å0.280.38Probable 3-hydroxyisobutyrate dehydrogenase
3qvj.1.A20.00homo-hexamerHHblitsX-ray2.10Å0.280.38Putative hydantoin racemase
3hfr.1.A12.87homo-dimerHHblitsX-ray2.30Å0.270.38Glutamate racemase
3hfr.1.B12.87homo-dimerHHblitsX-ray2.30Å0.270.38Glutamate racemase
3out.1.A15.00homo-hexamerHHblitsX-ray1.65Å0.280.38Glutamate racemase
1zuw.1.A14.00homo-dimerHHblitsX-ray1.75Å0.280.38glutamate racemase 1
1zuw.1.B14.00homo-dimerHHblitsX-ray1.75Å0.280.38glutamate racemase 1
2zsk.1.A7.84homo-dimerHHblitsX-ray2.55Å0.260.38226aa long hypothetical aspartate racemase
2jfp.1.A10.89homo-dimerHHblitsX-ray1.98Å0.270.38GLUTAMATE RACEMASE
2jfo.1.B10.89homo-dimerHHblitsX-ray2.50Å0.270.38GLUTAMATE RACEMASE
2dwu.1.A13.86homo-dimerHHblitsX-ray1.60Å0.270.38Glutamate racemase
2dwu.2.A13.86homo-dimerHHblitsX-ray1.60Å0.270.38Glutamate racemase
2gzm.1.A14.00homo-dimerHHblitsX-ray1.99Å0.270.38Glutamate racemase
2gzm.1.B14.00homo-dimerHHblitsX-ray1.99Å0.270.38Glutamate racemase
2gzm.2.B14.00homo-dimerHHblitsX-ray1.99Å0.270.38Glutamate racemase
2jfw.1.A14.00homo-dimerHHblitsX-ray2.00Å0.270.38GLUTAMATE RACEMASE
2oho.1.A13.86homo-dimerHHblitsX-ray2.25Å0.270.38Glutamate Racemase
2oho.1.B13.86homo-dimerHHblitsX-ray2.25Å0.270.38Glutamate Racemase
2vvt.1.A11.88homo-dimerHHblitsX-ray1.65Å0.260.38GLUTAMATE RACEMASE
2vvt.1.B11.88homo-dimerHHblitsX-ray1.65Å0.260.38GLUTAMATE RACEMASE
5b19.1.A11.88homo-dimerHHblitsX-ray1.85Å0.260.38Aspartate racemase
5b19.1.B11.88homo-dimerHHblitsX-ray1.85Å0.260.38Aspartate racemase
2ohv.1.A14.00homo-dimerHHblitsX-ray2.50Å0.270.38Glutamate Racemase
2ohg.1.A14.00homo-dimerHHblitsX-ray2.50Å0.270.38Glutamate racemase
2vlb.1.A16.33monomerHHblitsX-ray1.92Å0.270.37ARYLMALONATE DECARBOXYLASE
2vlb.2.A16.33monomerHHblitsX-ray1.92Å0.270.37ARYLMALONATE DECARBOXYLASE
2vlb.3.A16.33monomerHHblitsX-ray1.92Å0.270.37ARYLMALONATE DECARBOXYLASE
2vlb.4.A16.33monomerHHblitsX-ray1.92Å0.270.37ARYLMALONATE DECARBOXYLASE
3dg9.1.A16.33monomerHHblitsX-ray1.50Å0.270.37Arylmalonate decarboxylase
3uho.1.A15.00monomerHHblitsX-ray2.20Å0.250.38Glutamate racemase
3uhf.2.A15.00monomerHHblitsX-ray1.83Å0.250.38Glutamate racemase
3uhp.1.A15.00monomerHHblitsX-ray2.79Å0.250.38Glutamate racemase
5w1q.1.A10.00homo-dimerHHblitsX-ray1.95Å0.250.38Glutamate racemase
2dgd.1.A14.58homo-octamerHHblitsX-ray2.90Å0.260.36223aa long hypothetical arylmalonate decarboxylase
2jfn.1.A13.68monomerHHblitsX-ray1.90Å0.270.36GLUTAMATE RACEMASE
3mjf.1.A9.38monomerHHblitsX-ray1.47Å0.260.36Phosphoribosylamine--glycine ligase
3dtv.3.A14.74monomerHHblitsX-ray2.10Å0.270.36Arylmalonate decarboxylase
3dtv.2.A14.74monomerHHblitsX-ray2.10Å0.270.36Arylmalonate decarboxylase
3dtv.1.A14.74monomerHHblitsX-ray2.10Å0.270.36Arylmalonate decarboxylase
3dtv.4.A14.74monomerHHblitsX-ray2.10Å0.270.36Arylmalonate decarboxylase
3eis.1.A14.74monomerHHblitsX-ray2.10Å0.270.36Arylmalonate decarboxylase
3eis.2.A14.74monomerHHblitsX-ray2.10Å0.270.36Arylmalonate decarboxylase
3ixl.1.A12.37monomerHHblitsX-ray1.45Å0.250.37Arylmalonate decarboxylase
3ixm.1.A14.74monomerHHblitsX-ray1.90Å0.260.36Arylmalonate decarboxylase
2xec.1.A10.42homo-dimerHHblitsX-ray2.20Å0.250.36PUTATIVE MALEATE ISOMERASE
3lzc.1.A17.58homo-dimerHHblitsX-ray2.26Å0.290.34Dph2
3lzc.1.B17.58homo-dimerHHblitsX-ray2.26Å0.290.34Dph2
2bdq.1.A20.88homo-dimerHHblitsX-ray2.30Å0.290.34copper homeostasis protein CutC
5mlk.1.A18.68homo-dimerHHblitsX-ray1.94Å0.280.34Acetyl-COA carboxylase
5h80.1.A11.70homo-dimerHHblitsX-ray1.70Å0.250.35Carboxylase
3d4o.1.A20.88homo-dimerHHblitsX-ray2.10Å0.280.34Dipicolinate synthase subunit A
3d4o.1.B20.88homo-dimerHHblitsX-ray2.10Å0.280.34Dipicolinate synthase subunit A
5dou.1.A16.85homo-dimerHHblitsX-ray2.60Å0.300.34Carbamoyl-phosphate synthase [ammonia], mitochondrial
5dot.1.A16.85homo-dimerHHblitsX-ray2.40Å0.300.34Carbamoyl-phosphate synthase [ammonia], mitochondrial
2yl2.1.A15.38monomerHHblitsX-ray2.30Å0.280.34ACETYL-COA CARBOXYLASE 1
2yl2.2.A15.38monomerHHblitsX-ray2.30Å0.280.34ACETYL-COA CARBOXYLASE 1
3gid.1.A15.38monomerHHblitsX-ray2.30Å0.270.34Acetyl-CoA carboxylase 2
3gid.2.A15.38monomerHHblitsX-ray2.30Å0.270.34Acetyl-CoA carboxylase 2
3glk.1.A15.38monomerHHblitsX-ray2.10Å0.270.34Acetyl-CoA carboxylase 2
5kkn.2.A15.38monomerHHblitsX-ray2.60Å0.270.34Acetyl-CoA carboxylase 2
5kkn.1.A15.38monomerHHblitsX-ray2.60Å0.270.34Acetyl-CoA carboxylase 2
2c00.1.A17.39monomerHHblitsX-ray2.50Å0.260.35BIOTIN CARBOXYLASE
2c00.2.A17.39monomerHHblitsX-ray2.50Å0.260.35BIOTIN CARBOXYLASE
2vqd.1.A17.39monomerHHblitsX-ray2.41Å0.260.35BIOTIN CARBOXYLASE
1iu9.1.A18.60monomerHHblitsX-ray2.04Å0.310.32aspartate racemase
1ulz.1.A16.85homo-dimerHHblitsX-ray2.20Å0.290.34pyruvate carboxylase n-terminal domain
1gso.1.A9.78monomerHHblitsX-ray1.60Å0.260.35PROTEIN (GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE)
1ez1.1.A9.57homo-dimerHHblitsX-ray1.75Å0.230.35PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2
1ez1.1.B9.57homo-dimerHHblitsX-ray1.75Å0.230.35PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2
3rv4.1.A17.98homo-dimerHHblitsX-ray1.98Å0.270.34Biotin carboxylase
2qk4.1.A13.19monomerHHblitsX-ray2.45Å0.260.34Trifunctional purine biosynthetic protein adenosine-3
2gpw.1.A17.98monomerHHblitsX-ray2.20Å0.270.34Biotin carboxylase
2gpw.4.A17.98monomerHHblitsX-ray2.20Å0.270.34Biotin carboxylase
3g8d.1.A17.98monomerHHblitsX-ray1.90Å0.270.34Biotin carboxylase
3lp8.1.A15.73monomerHHblitsX-ray2.15Å0.270.34Phosphoribosylamine-glycine ligase
4mv4.2.A19.10monomerHHblitsX-ray1.61Å0.270.34Biotin carboxylase
2yya.1.A13.64monomerHHblitsX-ray2.40Å0.280.33Phosphoribosylamine--glycine ligase
2vpq.1.A13.64homo-dimerHHblitsX-ray2.10Å0.280.33ACETYL-COA CARBOXYLASE
2ip4.1.A16.85monomerHHblitsX-ray2.80Å0.270.34Phosphoribosylamine--glycine ligase
2ip4.2.A16.85monomerHHblitsX-ray2.80Å0.270.34Phosphoribosylamine--glycine ligase
2gps.1.A17.98monomerHHblitsX-ray2.80Å0.270.34Biotin carboxylase
3g8c.1.A17.05monomerHHblitsX-ray2.00Å0.270.33Biotin carboxylase
3g8c.2.A17.05monomerHHblitsX-ray2.00Å0.270.33Biotin carboxylase
1h7x.1.A17.44homo-dimerHHblitsX-ray2.01Å0.290.32DIHYDROPYRIMIDINE DEHYDROGENASE
3wgi.1.B14.77homo-dimerHHblitsX-ray3.25Å0.270.33Redox-sensing transcriptional repressor rex
3wg9.2.A14.77homo-dimerHHblitsX-ray1.97Å0.270.33Redox-sensing transcriptional repressor rex
3wg9.2.B14.77homo-dimerHHblitsX-ray1.97Å0.270.33Redox-sensing transcriptional repressor rex
3wgh.1.B14.77homo-dimerHHblitsX-ray2.05Å0.270.33Redox-sensing transcriptional repressor rex
3wgg.1.A14.77homo-dimerHHblitsX-ray2.10Å0.270.33Redox-sensing transcriptional repressor rex
3wgg.1.B14.77homo-dimerHHblitsX-ray2.10Å0.270.33Redox-sensing transcriptional repressor rex
2w6m.1.A17.05monomerHHblitsX-ray2.00Å0.270.33BIOTIN CARBOXYLASE
1bnc.1.B17.05homo-dimerHHblitsX-ray2.40Å0.270.33BIOTIN CARBOXYLASE
1bnc.1.A17.05homo-dimerHHblitsX-ray2.40Å0.270.33BIOTIN CARBOXYLASE
4hr7.1.A17.05hetero-oligomerHHblitsX-ray2.50Å0.270.33Biotin carboxylase
4hr7.1.C17.05hetero-oligomerHHblitsX-ray2.50Å0.270.33Biotin carboxylase
4hr7.1.E17.05hetero-oligomerHHblitsX-ray2.50Å0.270.33Biotin carboxylase
4hr7.1.F17.05hetero-oligomerHHblitsX-ray2.50Å0.270.33Biotin carboxylase
2j9g.2.A17.05monomerHHblitsX-ray2.05Å0.270.33BIOTIN CARBOXYLASE
2vr1.2.A17.05monomerHHblitsX-ray2.60Å0.270.33BIOTIN CARBOXYLASE
1dv2.1.A16.85monomerHHblitsX-ray2.50Å0.260.34BIOTIN CARBOXYLASE
3ktd.1.A14.44homo-dimerHHblitsX-ray2.60Å0.250.34Prephenate dehydrogenase
2ys6.1.A13.48monomerHHblitsX-ray2.21Å0.260.34Phosphoribosylglycinamide synthetase
5e38.1.B24.39homo-tetramerHHblitsX-ray3.00Å0.320.31Uracil phosphoribosyltransferase
5e38.1.A24.39homo-tetramerHHblitsX-ray3.00Å0.320.31Uracil phosphoribosyltransferase
5e38.1.D24.39homo-tetramerHHblitsX-ray3.00Å0.320.31Uracil phosphoribosyltransferase
2ehj.1.A24.39homo-tetramerHHblitsX-ray2.80Å0.320.31Uracil phosphoribosyltransferase
2ehj.1.C24.39homo-tetramerHHblitsX-ray2.80Å0.320.31Uracil phosphoribosyltransferase
1xtu.1.A8.05homo-tetramerHHblitsX-ray2.80Å0.270.33Probable uracil phosphoribosyltransferase
3g6w.1.A8.05homo-tetramerHHblitsX-ray2.90Å0.270.33Uracil phosphoribosyltransferase
3g6w.1.B8.05homo-tetramerHHblitsX-ray2.90Å0.270.33Uracil phosphoribosyltransferase
1xtv.1.B8.05homo-tetramerHHblitsX-ray2.60Å0.270.33Probable uracil phosphoribosyltransferase
1xtv.1.C8.05homo-tetramerHHblitsX-ray2.60Å0.270.33Probable uracil phosphoribosyltransferase
1xtt.1.A8.05homo-tetramerHHblitsX-ray1.80Å0.270.33Probable uracil phosphoribosyltransferase
1xtt.1.B8.05homo-tetramerHHblitsX-ray1.80Å0.270.33Probable uracil phosphoribosyltransferase
1vst.1.A8.05homo-tetramerHHblitsX-ray2.80Å0.270.33Uracil phosphoribosyltransferase
3rv3.1.A14.94homo-dimerHHblitsX-ray1.91Å0.270.33Biotin carboxylase
2xcl.1.A7.87monomerHHblitsX-ray2.10Å0.250.34PHOSPHORIBOSYLAMINE--GLYCINE LIGASE
2pn1.1.A11.63homo-dimerHHblitsX-ray2.00Å0.270.32Carbamoylphosphate synthase large subunit
1ez1.1.A13.95homo-dimerHHblitsX-ray1.75Å0.270.32PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2
1ez1.1.B13.95homo-dimerHHblitsX-ray1.75Å0.270.32PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2
1o5o.1.A21.69homo-tetramerHHblitsX-ray2.30Å0.300.31Uracil phosphoribosyltransferase
1i5e.1.A18.29homo-dimerHHblitsX-ray3.00Å0.300.31URACIL PHOSPHORIBOSYLTRANSFERASE
1v9s.1.B19.28homo-tetramerHHblitsX-ray2.10Å0.290.31uracil phosphoribosyltransferase
1v9s.1.A19.28homo-tetramerHHblitsX-ray2.10Å0.290.31uracil phosphoribosyltransferase
1v9s.1.D19.28homo-tetramerHHblitsX-ray2.10Å0.290.31uracil phosphoribosyltransferase
4iil.1.A13.10monomerHHblitsX-ray1.30Å0.270.32Membrane lipoprotein TpN38(b)
2jfy.1.B9.30homo-dimerHHblitsX-ray1.90Å0.250.32GLUTAMATE RACEMASE
2jfz.1.A9.30homo-dimerHHblitsX-ray1.86Å0.250.32GLUTAMATE RACEMASE
2jfx.1.A9.30homo-dimerHHblitsX-ray2.30Å0.250.32GLUTAMATE RACEMASE
2jfx.1.B9.30homo-dimerHHblitsX-ray2.30Å0.250.32GLUTAMATE RACEMASE
2jfy.1.A9.30homo-dimerHHblitsX-ray1.90Å0.250.32GLUTAMATE RACEMASE
4b1f.1.B9.30homo-dimerHHblitsX-ray2.05Å0.250.32GLUTAMATE RACEMASE
2w4i.1.A9.30homo-tetramerHHblitsX-ray1.87Å0.250.32GLUTAMATE RACEMASE
5kws.1.A22.22monomerHHblitsX-ray1.32Å0.290.31Galactose-binding protein
3gdo.1.A9.52homo-dimerHHblitsX-ray2.03Å0.270.32Uncharacterized oxidoreductase yvaA
5ere.1.A20.99monomerHHblitsX-ray2.00Å0.290.31Extracellular ligand-binding receptor
2ipl.1.A23.75monomerHHblitsX-ray1.20Å0.290.30D-galactose-binding periplasmic protein
1glg.1.A23.75monomerHHblitsX-ray2.00Å0.290.30GALACTOSE/GLUCOSE-BINDING PROTEIN
2qw1.1.A23.75monomerHHblitsX-ray1.70Å0.290.30D-galactose-binding periplasmic protein
2fvy.1.A23.75monomerHHblitsX-ray0.92Å0.290.30D-galactose-binding periplasmic protein
2ipm.1.A23.75monomerHHblitsX-ray1.12Å0.290.30D-galactose-binding periplasmic protein
2e55.1.A13.41homo-tetramerHHblitsX-ray2.15Å0.270.31Uracil phosphoribosyltransferase
2ipn.1.A23.75monomerHHblitsX-ray1.15Å0.290.30D-galactose-binding periplasmic protein
2hph.1.A22.50monomerHHblitsX-ray1.33Å0.290.30D-galactose-binding periplasmic protein
3cea.1.A10.98homo-tetramerHHblitsX-ray2.40Å0.270.31Myo-inositol 2-dehydrogenase
3rc1.1.A17.50monomerHHblitsX-ray1.71Å0.290.30Sugar 3-ketoreductase
5ktk.1.A13.41monomerHHblitsX-ray1.98Å0.270.31Polyketide synthase PksJ
2hqb.1.A16.25monomerHHblitsX-ray2.70Å0.280.30Transcriptional activator of comK gene
4iil.1.A18.99monomerHHblitsX-ray1.30Å0.290.30Membrane lipoprotein TpN38(b)
2ip4.1.A18.75monomerHHblitsX-ray2.80Å0.280.30Phosphoribosylamine--glycine ligase
2ip4.2.A18.75monomerHHblitsX-ray2.80Å0.280.30Phosphoribosylamine--glycine ligase
3q2k.1.A16.67homo-octamerHHblitsX-ray2.13Å0.290.29oxidoreductase
3q2k.1.B16.67homo-octamerHHblitsX-ray2.13Å0.290.29oxidoreductase
3mjf.1.A16.05monomerHHblitsX-ray1.47Å0.260.31Phosphoribosylamine--glycine ligase
5vev.1.A10.00monomerHHblitsX-ray1.90Å0.260.30Phosphoribosylamine--glycine ligase
4ru1.1.A11.39monomerHHblitsX-ray1.50Å0.270.30Monosaccharide ABC transporter substrate-binding protein, CUT2 family
1qh1.1.B15.58hetero-oligomerHHblitsX-ray1.60Å0.290.29PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN)
3bbl.1.A13.92homo-dimerHHblitsX-ray2.35Å0.260.30Regulatory protein of LacI family
4d5g.1.A13.75homo-tetramerHHblitsX-ray2.00Å0.250.30CYCLOHEXANE-1,2-DIONE HYDROLASE
2ys6.1.A12.50monomerHHblitsX-ray2.21Å0.250.30Phosphoribosylglycinamide synthetase
4iq0.1.A15.58homo-dimerHHblitsX-ray2.00Å0.280.29Oxidoreductase, Gfo/Idh/MocA family
4iq0.2.B15.58homo-dimerHHblitsX-ray2.00Å0.280.29Oxidoreductase, Gfo/Idh/MocA family
3x43.1.A18.42homo-tetramerHHblitsX-ray2.25Å0.290.29O-ureido-L-serine synthase
3x43.1.B18.42homo-tetramerHHblitsX-ray2.25Å0.290.29O-ureido-L-serine synthase
5eqv.1.A14.10monomerHHblitsX-ray1.45Å0.260.29bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein
3q2i.1.A17.11homo-octamerHHblitsX-ray1.50Å0.280.29dehydrogenase
2pgn.1.A13.92homo-tetramerHHblitsX-ray1.20Å0.250.30Cyclohexane-1,2-dione Hydrolase (Cdh)
3x44.1.A14.10homo-tetramerHHblitsX-ray1.90Å0.260.29O-ureido-L-serine synthase
3lft.1.A14.47monomerHHblitsX-ray1.35Å0.270.29uncharacterized protein
2lle.1.A11.84monomerHHblitsNMRNA0.270.29Chemotaxis protein CheY, Imidazole glycerol phosphate synthase subunit HisF chimera
2qk4.1.A14.47monomerHHblitsX-ray2.45Å0.270.29Trifunctional purine biosynthetic protein adenosine-3
5vev.1.A10.39monomerHHblitsX-ray1.90Å0.260.29Phosphoribosylamine--glycine ligase
2rdm.1.A14.47homo-hexamerHHblitsX-ray1.76Å0.260.29Response regulator receiver protein
2rdm.1.B14.47homo-hexamerHHblitsX-ray1.76Å0.260.29Response regulator receiver protein
2rdm.1.C14.47homo-hexamerHHblitsX-ray1.76Å0.260.29Response regulator receiver protein
3cwo.1.A9.21homo-dimerHHblitsX-ray3.10Å0.260.29beta/alpha-barrel protein based on 1THF and 1TMY
1gso.1.A16.00monomerHHblitsX-ray1.60Å0.270.28PROTEIN (GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE)
4nas.1.A26.09homo-dimerHHblitsX-ray1.92Å0.320.26Ribulose-bisphosphate carboxylase
4egj.1.A20.55monomerHHblitsX-ray2.30Å0.270.28D-alanine--D-alanine ligase
3gka.1.A10.53monomerHHblitsX-ray2.30Å0.240.29N-ethylmaleimide reductase
4by9.1.D13.70hetero-oligomerHHblitsNMRNA0.270.2850S RIBOSOMAL PROTEIN L7AE
4by9.1.G13.70hetero-oligomerHHblitsNMRNA0.270.2850S RIBOSOMAL PROTEIN L7AE
4by9.1.J13.70hetero-oligomerHHblitsNMRNA0.270.2850S RIBOSOMAL PROTEIN L7AE
4by9.1.M13.70hetero-oligomerHHblitsNMRNA0.270.2850S RIBOSOMAL PROTEIN L7AE
4mkx.1.A14.29homo-tetramerHHblitsX-ray1.60Å0.300.26Inositol dehydrogenase
2oek.1.A24.64homo-dimerHHblitsX-ray1.80Å0.310.262,3-diketo-5-methylthiopentyl-1-phosphate enolase
3lft.1.A12.68monomerHHblitsX-ray1.35Å0.280.27uncharacterized protein
3ec7.1.A14.71homo-tetramerHHblitsX-ray2.15Å0.310.26Putative Dehydrogenase
3t9p.1.A14.08homo-dimerHHblitsX-ray1.97Å0.270.27Mandelate racemase/muconate lactonizing enzyme family protein
3i23.1.A9.72homo-dimerHHblitsX-ray2.30Å0.260.27Oxidoreductase, Gfo/Idh/MocA family
3nkl.1.A15.94homo-dimerHHblitsX-ray1.90Å0.290.26UDP-D-quinovosamine 4-dehydrogenase
3nkl.1.B15.94homo-dimerHHblitsX-ray1.90Å0.290.26UDP-D-quinovosamine 4-dehydrogenase
2eq5.1.A22.06homo-dimerHHblitsX-ray2.20Å0.300.26228aa long hypothetical hydantoin racemase
2eq5.2.B22.06homo-dimerHHblitsX-ray2.20Å0.300.26228aa long hypothetical hydantoin racemase
3i05.1.A6.94homo-dimerHHblitsX-ray2.80Å0.250.27Tryptophanyl-tRNA synthetase
3rcb.1.A20.59monomerHHblitsX-ray2.49Å0.300.26Sugar 3-ketoreductase
4n54.1.A14.71homo-tetramerHHblitsX-ray2.05Å0.290.26Inositol dehydrogenase
4n54.1.C14.71homo-tetramerHHblitsX-ray2.05Å0.290.26Inositol dehydrogenase
4n54.1.D14.71homo-tetramerHHblitsX-ray2.05Å0.290.26Inositol dehydrogenase
1o5t.1.A5.56homo-dimerHHblitsX-ray2.50Å0.250.27Tryptophanyl-tRNA synthetase
2qui.1.B5.56homo-dimerHHblitsX-ray2.40Å0.250.27Tryptophanyl-tRNA synthetase
2quk.1.A5.56homo-dimerHHblitsX-ray2.80Å0.250.27Tryptophanyl-tRNA synthetase
2qui.1.A5.56homo-dimerHHblitsX-ray2.40Å0.250.27Tryptophanyl-tRNA synthetase
1r6u.1.A5.56homo-dimerHHblitsX-ray2.00Å0.250.27Tryptophanyl-tRNA synthetase
1r6u.1.B5.56homo-dimerHHblitsX-ray2.00Å0.250.27Tryptophanyl-tRNA synthetase
4iyj.1.A14.71homo-dimerHHblitsX-ray1.37Å0.290.26GDSL-like protein
1h6c.1.A10.00homo-tetramerHHblitsX-ray2.20Å0.260.26PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE
1g21.1.B11.59hetero-oligomerHHblitsX-ray3.00Å0.270.26NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN
1r6t.1.A5.63homo-dimerHHblitsX-ray2.10Å0.250.27Tryptophanyl-tRNA synthetase
1r6t.1.B5.63homo-dimerHHblitsX-ray2.10Å0.250.27Tryptophanyl-tRNA synthetase
2azx.1.B5.63homo-dimerHHblitsX-ray2.80Å0.250.27Tryptophanyl-tRNA synthetase
1ulh.1.A5.63homo-dimerHHblitsX-ray2.31Å0.250.27Tryptophanyl-tRNA synthetase
1ulh.1.B5.63homo-dimerHHblitsX-ray2.31Å0.250.27Tryptophanyl-tRNA synthetase
3rc9.1.A19.40monomerHHblitsX-ray1.91Å0.290.25Sugar 3-ketoreductase
4hf7.1.A11.94homo-dimerHHblitsX-ray1.77Å0.280.25Putative acylhydrolase
5a02.1.A10.45homo-dimerHHblitsX-ray2.00Å0.280.25ALDOSE-ALDOSE OXIDOREDUCTASE
1ofg.1.A10.45homo-tetramerHHblitsX-ray2.70Å0.270.25GLUCOSE-FRUCTOSE OXIDOREDUCTASE
3q2k.1.A23.44homo-octamerHHblitsX-ray2.13Å0.310.24oxidoreductase
3q2k.1.B23.44homo-octamerHHblitsX-ray2.13Å0.310.24oxidoreductase
1evj.1.A11.94homo-dimerHHblitsX-ray2.70Å0.270.25GLUCOSE-FRUCTOSE OXIDOREDUCTASE
2o14.1.A19.70monomerHHblitsX-ray2.10Å0.280.25Hypothetical protein yxiM
1ryd.1.A11.94homo-tetramerHHblitsX-ray2.20Å0.270.25glucose-fructose oxidoreductase
1rye.1.B11.94homo-tetramerHHblitsX-ray2.30Å0.270.25glucose-fructose oxidoreductase
1rye.1.A11.94homo-tetramerHHblitsX-ray2.30Å0.270.25glucose-fructose oxidoreductase
4ppy.1.A13.64homo-dimerHHblitsX-ray2.00Å0.280.25Putative acylhydrolase
1j00.1.A13.64monomerHHblitsX-ray2.00Å0.270.25Thioesterase I
1u8u.1.A13.64monomerHHblitsX-ray2.08Å0.270.25Acyl-CoA thioesterase I
1v2g.1.A13.64monomerHHblitsX-ray2.00Å0.270.25Acyl-CoA thioesterase I
4iq0.1.A10.61homo-dimerHHblitsX-ray2.00Å0.270.25Oxidoreductase, Gfo/Idh/MocA family
4iq0.2.B10.61homo-dimerHHblitsX-ray2.00Å0.270.25Oxidoreductase, Gfo/Idh/MocA family
5b5s.1.A13.43monomerHHblitsX-ray1.50Å0.260.25Acetic acid
3q2i.1.A15.63homo-octamerHHblitsX-ray1.50Å0.290.24dehydrogenase
2ho5.1.A12.50homo-dimerHHblitsX-ray2.56Å0.280.24Oxidoreductase, Gfo/Idh/MocA family
3pbk.1.A12.70monomerHHblitsX-ray3.00Å0.270.24Fatty Acyl-Adenylate Ligase
2ake.1.B6.35homo-dimerHHblitsX-ray3.10Å0.250.24Tryptophanyl-tRNA synthetase
2p2q.1.A12.90monomerHHblitsX-ray2.42Å0.260.23Acetyl-coenzyme A synthetase
2p2f.1.A11.29monomerHHblitsX-ray2.58Å0.260.23Acetyl-coenzyme A synthetase
1pg3.1.A11.29monomerHHblitsX-ray2.30Å0.260.23acetyl-CoA synthetase
2p20.1.A11.29monomerHHblitsX-ray2.22Å0.260.23Acetyl-coenzyme A synthetase
1wau.1.A17.54homo-trimerHHblitsX-ray2.80Å0.270.22KHG/KDPG ALDOLASE
1wbh.1.A17.54homo-trimerHHblitsX-ray1.55Å0.270.22KHG/KDPG ALDOLASE
3noy.1.A25.93homo-dimerHHblitsX-ray2.70Å0.310.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
3noy.2.A25.93homo-dimerHHblitsX-ray2.70Å0.310.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1fq0.1.A17.54homo-trimerHHblitsX-ray2.10Å0.270.22KDPG ALDOLASE
1eua.1.C17.54homo-trimerHHblitsX-ray1.95Å0.270.22KDPG ALDOLASE
1b73.1.A10.53homo-dimerHHblitsX-ray2.30Å0.270.22GLUTAMATE RACEMASE
2p2m.1.A10.34monomerHHblitsX-ray2.11Å0.250.22Acetyl-coenzyme A synthetase
3bol.1.A20.75homo-dimerHHblitsX-ray1.85Å0.300.205-methyltetrahydrofolate S-homocysteine methyltransferase
1q7m.2.A20.75monomerHHblitsX-ray2.10Å0.300.205-methyltetrahydrofolate S-homocysteine methyltransferase
1q7q.1.A20.75monomerHHblitsX-ray3.10Å0.300.205-methyltetrahydrofolate S-homocysteine methyltransferase
1q8a.2.A20.75monomerHHblitsX-ray1.70Å0.300.205-methyltetrahydrofolate S-homocysteine methyltransferase
4mwa.1.A14.81homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.B14.81homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.C14.81homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.D14.81homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.B14.81homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.D14.81homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1yht.1.A15.09monomerHHblitsX-ray2.00Å0.290.20DspB
1fq0.1.A17.31homo-trimerHHblitsX-ray2.10Å0.290.20KDPG ALDOLASE
1eua.1.C17.31homo-trimerHHblitsX-ray1.95Å0.290.20KDPG ALDOLASE
4fq5.1.A13.21homo-tetramerHHblitsX-ray2.10Å0.280.20Maleate cis-trans isomerase
4fq5.1.B13.21homo-tetramerHHblitsX-ray2.10Å0.280.20Maleate cis-trans isomerase
4fq7.1.A13.46homo-tetramerHHblitsX-ray3.00Å0.280.20Maleate cis-trans isomerase
4mg4.1.A23.53homo-dimerHHblitsX-ray1.70Å0.290.19Phosphonomutase
4mg4.2.B23.53homo-dimerHHblitsX-ray1.70Å0.290.19Phosphonomutase
1fwr.1.A20.00homo-trimerHHblitsX-ray2.70Å0.280.19KDPG ALDOLASE
3fph.1.A16.33homo-dimerHHblitsX-ray1.80Å0.290.18Putative uncharacterized protein
3fph.1.B16.33homo-dimerHHblitsX-ray1.80Å0.290.18Putative uncharacterized protein
3fpj.1.B16.33homo-dimerHHblitsX-ray1.80Å0.290.18Putative uncharacterized protein
3fpg.1.A16.33homo-dimerHHblitsX-ray2.00Å0.290.18Putative uncharacterized protein
2xed.1.A10.00monomerHHblitsX-ray1.95Å0.260.19PUTATIVE MALEATE ISOMERASE
4c22.1.A8.00homo-hexamerHHblitsX-ray2.70Å0.250.19L-FUCOSE ISOMERASE
4ix1.1.A8.00homo-dimerHHblitsX-ray2.80Å0.250.19hypothetical protein
4ix1.1.B8.00homo-dimerHHblitsX-ray2.80Å0.250.19hypothetical protein
4c20.1.A6.00monomerHHblitsX-ray2.41Å0.250.19L-FUCOSE ISOMERASE
4c21.1.A6.00homo-hexamerHHblitsX-ray2.55Å0.250.19L-FUCOSE ISOMERASE
1fui.1.A14.29homo-trimerHHblitsX-ray2.50Å0.260.18L-FUCOSE ISOMERASE
3a9t.1.A12.77homo-hexamerHHblitsX-ray2.61Å0.260.18D-arabinose isomerase
4qwv.1.A9.09monomerHHblitsX-ray2.45Å0.300.17High-affinity leucine-specific transport system periplasmic binding protein, Chemotaxis protein CheY
4fdc.1.A26.83monomerHHblitsX-ray2.40Å0.340.15Apoptosis-inducing factor 1, mitochondrial
5fs9.1.A26.83monomerHHblitsX-ray1.75Å0.340.15APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
5fs6.1.A26.83monomerHHblitsX-ray1.90Å0.340.15APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
5fs8.1.A26.83monomerHHblitsX-ray1.40Å0.340.15APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
5fmh.1.A26.83monomerHHblitsX-ray1.80Å0.340.15APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
3ef6.1.A27.50monomerHHblitsX-ray1.80Å0.360.15Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase
4emi.1.A27.50monomerHHblitsX-ray1.81Å0.360.15TodA
4emj.1.A27.50hetero-oligomerHHblitsX-ray2.40Å0.360.15TodA
2yya.1.A10.87monomerHHblitsX-ray2.40Å0.250.17Phosphoribosylamine--glycine ligase
2xcl.1.A10.64monomerHHblitsX-ray2.10Å0.230.18PHOSPHORIBOSYLAMINE--GLYCINE LIGASE
4h4v.1.A29.27homo-dimerHHblitsX-ray1.40Å0.330.15Biphenyl dioxygenase ferredoxin reductase subunit
4h4x.1.A29.27homo-dimerHHblitsX-ray1.50Å0.330.15Biphenyl dioxygenase ferredoxin reductase subunit
2gr3.1.A29.27homo-dimerHHblitsX-ray1.50Å0.330.15ferredoxin reductase
3bol.1.A29.27homo-dimerHHblitsX-ray1.85Å0.330.155-methyltetrahydrofolate S-homocysteine methyltransferase
1q7m.2.A29.27monomerHHblitsX-ray2.10Å0.330.155-methyltetrahydrofolate S-homocysteine methyltransferase
1q7q.1.A29.27monomerHHblitsX-ray3.10Å0.330.155-methyltetrahydrofolate S-homocysteine methyltransferase
1q8a.2.A29.27monomerHHblitsX-ray1.70Å0.330.155-methyltetrahydrofolate S-homocysteine methyltransferase
4bur.1.A27.50monomerHHblitsX-ray2.88Å0.340.15APOPTOSIS INDUCING FACTOR 1, MITOCHONDRIAL
4bur.3.A27.50monomerHHblitsX-ray2.88Å0.340.15APOPTOSIS INDUCING FACTOR 1, MITOCHONDRIAL
5fs7.1.A27.50monomerHHblitsX-ray1.85Å0.340.15APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
4lii.1.A27.50monomerHHblitsX-ray1.88Å0.340.15Apoptosis-inducing factor 1, mitochondrial
1m6i.1.A27.50monomerHHblitsX-ray1.80Å0.340.15Programmed cell death protein 8
3gd4.1.A27.50homo-dimerHHblitsX-ray2.24Å0.340.15Apoptosis-inducing factor 1, mitochondrial
3gd4.1.B27.50homo-dimerHHblitsX-ray2.24Å0.340.15Apoptosis-inducing factor 1, mitochondrial
5kvh.1.A27.50homo-dimerHHblitsX-ray2.27Å0.340.15Apoptosis-inducing factor 1, mitochondrial
3gd3.1.A27.50monomerHHblitsX-ray2.95Å0.340.15Apoptosis-inducing factor 1, mitochondrial
3gd3.2.A27.50monomerHHblitsX-ray2.95Å0.340.15Apoptosis-inducing factor 1, mitochondrial
3gd3.4.A27.50monomerHHblitsX-ray2.95Å0.340.15Apoptosis-inducing factor 1, mitochondrial
5miu.1.A27.50monomerHHblitsX-ray3.50Å0.340.15Apoptosis-inducing factor 1, mitochondrial
5miv.1.A27.50homo-dimerHHblitsX-ray3.10Å0.340.15Apoptosis-inducing factor 1, mitochondrial
5miv.1.B27.50homo-dimerHHblitsX-ray3.10Å0.340.15Apoptosis-inducing factor 1, mitochondrial
2gps.1.A13.33monomerHHblitsX-ray2.80Å0.250.17Biotin carboxylase
4h4r.1.A30.00homo-dimerHHblitsX-ray1.40Å0.340.15Biphenyl dioxygenase ferredoxin reductase subunit
2yvg.1.A30.00homo-dimerHHblitsX-ray1.60Å0.340.15Ferredoxin reductase
2yvj.1.A30.00hetero-oligomerHHblitsX-ray1.90Å0.340.15Ferredoxin reductase
2yvj.1.C30.00hetero-oligomerHHblitsX-ray1.90Å0.340.15Ferredoxin reductase
1d7y.1.A30.00homo-dimerHHblitsX-ray2.10Å0.340.15FERREDOXIN REDUCTASE
4h4t.1.A30.00homo-dimerHHblitsX-ray1.50Å0.340.15Biphenyl dioxygenase ferredoxin reductase subunit
4h4z.1.A30.00homo-dimerHHblitsX-ray1.95Å0.340.15Biphenyl dioxygenase ferredoxin reductase subunit
4h4p.1.A30.00homo-dimerHHblitsX-ray1.50Å0.340.15Biphenyl dioxygenase ferredoxin reductase subunit
5jcm.1.A19.05monomerHHblitsX-ray1.90Å0.300.16Os09g0567300 protein
3g8d.1.A11.11monomerHHblitsX-ray1.90Å0.240.17Biotin carboxylase
3lxd.1.A21.95monomerHHblitsX-ray2.50Å0.310.15FAD-dependent pyridine nucleotide-disulphide oxidoreductase
3ics.1.A17.07homo-dimerHHblitsX-ray1.94Å0.310.15Coenzyme A-Disulfide Reductase
5kvi.1.A28.21monomerHHblitsX-ray2.00Å0.350.15Apoptosis-inducing factor 1, mitochondrial
1gv4.1.A28.21monomerHHblitsX-ray2.00Å0.350.15PROGRAMED CELL DEATH PROTEIN 8
1q1r.1.A21.95monomerHHblitsX-ray1.91Å0.300.15Putidaredoxin reductase
1q1w.2.A21.95monomerHHblitsX-ray2.60Å0.300.15Putidaredoxin reductase
3lb8.1.A21.95hetero-oligomerHHblitsX-ray2.60Å0.300.15Putidaredoxin reductase
3lb8.2.A21.95hetero-oligomerHHblitsX-ray2.60Å0.300.15Putidaredoxin reductase
3ga5.1.A9.30monomerHHblitsX-ray1.87Å0.260.16D-galactose-binding periplasmic protein
3rv3.1.A11.36homo-dimerHHblitsX-ray1.91Å0.240.17Biotin carboxylase
4fx9.1.A14.63homo-dimerHHblitsX-ray2.70Å0.290.15Coenzyme A disulfide reductase
3kd9.1.A14.63homo-dimerHHblitsX-ray2.75Å0.290.15Coenzyme A disulfide reductase
2y85.1.A19.51monomerHHblitsX-ray2.40Å0.290.15PHOSPHORIBOSYL ISOMERASE A
3zs4.1.A19.51monomerHHblitsX-ray1.90Å0.290.15PHOSPHORIBOSYL ISOMERASE A
2v3a.1.A22.50monomerHHblitsX-ray2.40Å0.310.15RUBREDOXIN REDUCTASE
2v3b.1.A22.50hetero-oligomerHHblitsX-ray2.45Å0.310.15RUBREDOXIN REDUCTASE
3hyv.1.A23.68homo-trimerHHblitsX-ray2.30Å0.350.14Sulfide-quinone reductase
3cge.1.A9.76homo-dimerHHblitsX-ray2.26Å0.270.15Pyridine nucleotide-disulfide oxidoreductase, class I
3ipc.1.A15.00monomerHHblitsX-ray1.30Å0.290.15ABC transporter, substrate binding protein (Amino acid)
4kv7.1.A22.50monomerHHblitsX-ray1.20Å0.290.15Probable leucine/isoleucine/valine-binding protein
3nta.1.A12.50homo-dimerHHblitsX-ray2.01Å0.290.15FAD-dependent pyridine nucleotide-disulphide oxidoreductase
1usi.1.A10.26monomerHHblitsX-ray1.80Å0.310.15LEUCINE-SPECIFIC BINDING PROTEIN
1usg.1.A10.26homo-dimerHHblitsX-ray1.53Å0.310.15LEUCINE-SPECIFIC BINDING PROTEIN
5ere.1.A20.00monomerHHblitsX-ray2.00Å0.280.15Extracellular ligand-binding receptor
2liv.1.A10.26monomerHHblitsX-ray2.40Å0.300.15LEUCINE
2c7g.1.A10.00homo-dimerHHblitsX-ray1.80Å0.280.15NADPH-FERREDOXIN REDUCTASE FPRA
5l1n.1.A15.38homo-dimerHHblitsX-ray3.60Å0.300.15Coenzyme A disulfide reductase
3noy.1.A20.51homo-dimerHHblitsX-ray2.70Å0.300.154-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
3noy.2.A20.51homo-dimerHHblitsX-ray2.70Å0.300.154-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
3cgb.1.A10.00homo-dimerHHblitsX-ray1.90Å0.280.15Pyridine nucleotide-disulfide oxidoreductase, class I
1gpw.1.A15.00hetero-oligomerHHblitsX-ray2.40Å0.280.15HISF PROTEIN
1gpw.3.A15.00hetero-oligomerHHblitsX-ray2.40Å0.280.15HISF PROTEIN
3ipa.1.A15.38monomerHHblitsX-ray1.55Å0.290.15ABC transporter, substrate binding protein (Amino acid)
4fx7.1.A15.00monomerHHblitsX-ray2.08Å0.270.15Imidazole glycerol phosphate synthase subunit HisF
4eqr.1.A12.82homo-dimerHHblitsX-ray1.80Å0.290.15Coenzyme A disulfide reductase
4n0q.1.A20.51monomerHHblitsX-ray2.30Å0.290.15Leu/Ile/Val-binding protein homolog 3
1x7i.1.A18.42homo-dimerHHblitsX-ray1.70Å0.310.14Copper homeostasis protein cutC
1x7i.1.B18.42homo-dimerHHblitsX-ray1.70Å0.310.14Copper homeostasis protein cutC
1twd.1.A18.42homo-dimerHHblitsX-ray1.70Å0.310.14Copper homeostasis protein cutC
1twd.1.B18.42homo-dimerHHblitsX-ray1.70Å0.310.14Copper homeostasis protein cutC
1e1m.1.A15.38monomerHHblitsX-ray1.85Å0.280.15ADRENODOXIN REDUCTASE
1e1l.1.A15.38monomerHHblitsX-ray2.30Å0.280.15ADRENODOXIN REDUCTASE
1e6e.2.A15.38hetero-oligomerHHblitsX-ray2.30Å0.280.15NADPH\:ADRENODOXIN OXIDOREDUCTASE
1e6e.1.A15.38hetero-oligomerHHblitsX-ray2.30Å0.280.15NADPH\:ADRENODOXIN OXIDOREDUCTASE
4gj1.1.A12.82monomerHHblitsX-ray2.15Å0.280.151-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
2czw.1.A15.79monomerHHblitsX-ray1.90Å0.290.1450S ribosomal protein L7Ae
2zvi.1.A27.03homo-dimerHHblitsX-ray2.30Å0.300.142,3-diketo-5-methylthiopentyl-1-phosphate enolase
2zvi.1.B27.03homo-dimerHHblitsX-ray2.30Å0.300.142,3-diketo-5-methylthiopentyl-1-phosphate enolase
2zvi.2.A27.03homo-dimerHHblitsX-ray2.30Å0.300.142,3-diketo-5-methylthiopentyl-1-phosphate enolase
3vrd.1.B25.00hetero-oligomerHHblitsX-ray1.50Å0.320.14Flavocytochrome c flavin subunit
4n0q.1.A15.79monomerHHblitsX-ray2.30Å0.270.14Leu/Ile/Val-binding protein homolog 3
4kv7.1.A15.38monomerHHblitsX-ray1.20Å0.250.15Probable leucine/isoleucine/valine-binding protein
3ipa.1.A13.16monomerHHblitsX-ray1.55Å0.270.14ABC transporter, substrate binding protein (Amino acid)
2hqb.1.A5.13monomerHHblitsX-ray2.70Å0.250.15Transcriptional activator of comK gene
3lkv.1.A16.22homo-dimerHHblitsX-ray2.20Å0.280.14uncharacterized CONSERVED DOMAIN PROTEIN
4f06.1.A10.53monomerHHblitsX-ray1.30Å0.260.14Extracellular ligand-binding receptor
2lbp.1.A5.26monomerHHblitsX-ray2.40Å0.230.14LEUCINE-BINDING PROTEIN
3ipc.1.A14.29monomerHHblitsX-ray1.30Å0.280.13ABC transporter, substrate binding protein (Amino acid)
4evs.1.A11.43monomerHHblitsX-ray1.45Å0.280.13PUTATIVE ABC TRANSPORTER SUBUNIT, SUBSTRATE-BINDING COMPONENT
3ijd.1.A17.65homo-dimerHHblitsX-ray2.00Å0.280.13uncharacterized protein
4mg4.1.A17.65homo-dimerHHblitsX-ray1.70Å0.270.13Phosphonomutase
4mg4.2.B17.65homo-dimerHHblitsX-ray1.70Å0.270.13Phosphonomutase
1nvm.1.B12.12hetero-oligomerHHblitsX-ray1.70Å0.290.12acetaldehyde dehydrogenase (acylating)
1nvm.2.B12.12hetero-oligomerHHblitsX-ray1.70Å0.290.12acetaldehyde dehydrogenase (acylating)
4mld.1.A15.63homo-dimerHHblitsX-ray2.88Å0.290.12Response regulator
4mld.1.B15.63homo-dimerHHblitsX-ray2.88Å0.290.12Response regulator
4mld.2.A15.63homo-dimerHHblitsX-ray2.88Å0.290.12Response regulator
4mld.2.B15.63homo-dimerHHblitsX-ray2.88Å0.290.12Response regulator
5dmm.1.A15.63monomerHHblitsX-ray1.78Å0.260.12Homocysteine S-methyltransferase
5dmn.1.A15.63homo-dimerHHblitsX-ray2.89Å0.260.12Homocysteine S-methyltransferase
1glg.1.A10.00monomerHHblitsX-ray2.00Å0.260.11GALACTOSE/GLUCOSE-BINDING PROTEIN
2qw1.1.A10.00monomerHHblitsX-ray1.70Å0.260.11D-galactose-binding periplasmic protein
2fvy.1.A10.00monomerHHblitsX-ray0.92Å0.260.11D-galactose-binding periplasmic protein
3dfu.1.A22.22homo-dimerHHblitsX-ray2.07Å0.340.10Uncharacterized Protein from 6-Phosphogluconate Dehydrogenase-Like Family
3dfu.1.B22.22homo-dimerHHblitsX-ray2.07Å0.340.10Uncharacterized Protein from 6-Phosphogluconate Dehydrogenase-Like Family
1usi.1.A18.52monomerHHblitsX-ray1.80Å0.310.10LEUCINE-SPECIFIC BINDING PROTEIN
1usg.1.A18.52homo-dimerHHblitsX-ray1.53Å0.310.10LEUCINE-SPECIFIC BINDING PROTEIN
5a9r.1.A28.00homo-dimerHHblitsX-ray1.55Å0.340.09IMINE REDUCTASE
5a9s.1.A28.00hetero-oligomerHHblitsX-ray2.06Å0.340.09IMINE REDUCTASE
5fwn.1.B28.00homo-dimerHHblitsX-ray2.14Å0.340.09IMINE REDUCTASE
3pn9.1.A11.11homo-tetramerHHblitsX-ray2.00Å0.270.10Proline dipeptidase
3p94.1.A7.41monomerHHblitsX-ray1.93Å0.260.10GDSL-like Lipase
3lkv.1.A18.52homo-dimerHHblitsX-ray2.20Å0.260.10uncharacterized CONSERVED DOMAIN PROTEIN
3iwp.1.B15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.1.A15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.2.B15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.2.C15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.2.D15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.3.A15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.3.B15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.3.C15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
3iwp.3.D15.38homo-tetramerHHblitsX-ray2.50Å0.290.10Copper homeostasis protein cutC homolog
5kp9.1.A16.00homo-60-merHHblitsEMNA0.300.09EPN-01*
5cx1.1.B12.50hetero-oligomerHHblitsX-ray1.75Å0.310.09Nitrogenase molybdenum-iron protein beta chain
4xpi.1.B12.50hetero-oligomerHHblitsX-ray1.97Å0.310.09Nitrogenase molybdenum-iron protein beta chain
1m34.1.B12.50hetero-oligomerHHblitsX-ray2.30Å0.310.09Nitrogenase Molybdenum-Iron Protein beta chain
4rs3.1.A16.67monomerHHblitsX-ray1.40Å0.310.09ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, periplasmic sugar-binding protein
4zjp.1.A12.50monomerHHblitsX-ray1.63Å0.270.09Monosaccharide-transporting ATPase
4ru1.1.A12.50monomerHHblitsX-ray1.50Å0.260.09Monosaccharide ABC transporter substrate-binding protein, CUT2 family
4yv7.1.A8.70monomerHHblitsX-ray2.30Å0.280.09Periplasmic binding protein/LacI transcriptional regulator
2ipm.1.A13.04monomerHHblitsX-ray1.12Å0.270.09D-galactose-binding periplasmic protein
2ipn.1.A13.04monomerHHblitsX-ray1.15Å0.270.09D-galactose-binding periplasmic protein
5kws.1.A13.04monomerHHblitsX-ray1.32Å0.270.09Galactose-binding protein
2hph.1.A13.04monomerHHblitsX-ray1.33Å0.270.09D-galactose-binding periplasmic protein
4wxe.1.A28.57monomerHHblitsX-ray1.50Å0.330.08Transcriptional regulator, LacI family
2ipl.1.A13.64monomerHHblitsX-ray1.20Å0.280.08D-galactose-binding periplasmic protein
2liv.1.A14.29monomerHHblitsX-ray2.40Å0.300.08LEUCINE
3tq0.1.A14.29homo-dimerHHblitsX-ray1.90Å0.280.08Dihydroorotate dehydrogenase
3pid.1.A30.00homo-dimerHHblitsX-ray1.40Å0.310.08UDP-glucose 6-dehydrogenase
3rot.1.A5.26homo-dimerHHblitsX-ray1.91Å0.220.07ABC sugar transporter, periplasmic sugar binding protein
3mw8.1.A31.25monomerHHblitsX-ray1.65Å0.300.06Uroporphyrinogen-III synthase