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SWISS-MODEL Homology Modelling Report

Model Building Report

This document lists the results for the homology modelling project "D0CCM9" submitted to SWISS-MODEL workspace on Oct. 17, 2017, 6:54 p.m..The submitted primary amino acid sequence is given in Table T1.

If you use any results in your research, please cite the relevant publications:

Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano Gallo Cassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede. (2014). SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Research (1 July 2014) 42 (W1): W252-W258; doi: 10.1093/nar/gku340.
Arnold, K., Bordoli, L., Kopp, J. and Schwede, T. (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics, 22, 195-201.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350

Results

The SWISS-MODEL template library (SMTL version 2017-10-11, PDB release 2017-10-06) was searched with Blast (Altschul et al., 1997) and HHBlits (Remmert, et al., 2011) for evolutionary related structures matching the target sequence in Table T1. For details on the template search, see Materials and Methods. Overall 439 templates were found (Table T2).

Models

The following models were built (see Materials and Methods "Model Building"):

Model #01	File	Built with	Oligo-State	Ligands	GMQE	QMEAN
	PDB	ProMod3 Version 1.0.2.	MONOMER	1 x ATP: ADENOSINE-5'-TRIPHOSPHATE; 1 x MG: MAGNESIUM ION;	0.98	0.56

QMEAN	0.56
Cβ	1.34
All Atom	0.52
Solvation	1.30
Torsion	0.10

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Range	Coverage	Description
4qf5.1.A	99.14	monomer	HHblits	X-ray	2.80Å	0.60	7 - 465	1.00	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase

Ligand	Added to Model	Description
ATP	✓	ADENOSINE-5'-TRIPHOSPHATE
MG	✓	MAGNESIUM ION
MG	✕ - Clashing with protein.	MAGNESIUM ION

Target    MHTSTTSTVPLEPWTAQQLQQATQGYWHKDQIPQTEIKRILTDSRHAESGDAFLALKGERFDAHNFVAQVAANGCQVAIV
4qf5.1.A  MHTSTTSTVPLEPWTAQQLQQATQGYWHKDQIPQTEIKRILTDSRHAESGDAFLALKGERFDAHNFVAQVVANGCQVAIV

Target    ERPIDAEIAQLVVADTRLALGQLGAYRREQNAQLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLL
4qf5.1.A  ERPIDAEIAQLVVADTRLALGQLGAYRREQNAQLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLL

Target    ELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYHHILPQGVAIIPQQDDFTAE
4qf5.1.A  ELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAE

Target    IREAAKSHQIMSFGAGGDVFATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNVQNATAAVAFALALGVSLEDIVKGLEQ
4qf5.1.A  IREAAKSHQIMSFGEGGDVFATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNVQNATAAVAFALALGVSLEDIVKGLEQ

Target    AQGAKGRLNFIQKAPHLFIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGELGDSSWQEHHDLGRDLAELPLDHIVAV
4qf5.1.A  AQGAKGRLNFIQKAPHLFIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGELGDSSWQEHHDLGRDLAELPLDHIVAV

Target    GQFASAALEGAGLHSTKLKAFQTQAEALPFLINLIQTHQPQSMSFLFKGSRFTHMETLMADLMEKL
4qf5.1.A  GQFASAALEGAGLHSTKLKAFQTQAEALPFLINLIQTHQPQSMSFLFKGSRFTHMETLMADLMEKL

Model #02	File	Built with	Oligo-State	Ligands	GMQE	QMEAN
	PDB	ProMod3 Version 1.0.2.	MONOMER	None	0.51	-4.70

QMEAN	-4.70
Cβ	-4.77
All Atom	-4.40
Solvation	-2.18
Torsion	-3.50

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Range	Coverage	Description
1eeh.1.A	23.12	monomer	HHblits	X-ray	1.90Å	0.31	38 - 448	0.80	UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE

Ligand	Added to Model	Description
UMA	✕ - Binding site not conserved.	URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE

Target    MHTSTTSTVPLEPWTAQQLQQATQGYWHKDQIPQTEIKRILTDSRHAESGDAFLALKGER--FDAHNFVAQVAANGCQVA
1eeh.1.A  -------------------------------------TPRVMDTRMTPPGLDKLP-EAVERHTGSLN--D-EWLMAADLI

Target    IVERPIDAEIAQLVVAD--TRLALGQLGAYRREQNAQLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVP
1eeh.1.A  VASPGIALAHPSLSAAADAGIEIVGDIELFCRE--AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGN----IGLP

Target    MMLLELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAGILNIGTAHLGEFG-GRDGICRAKSEIYHHILPQGVAIIPQQD
1eeh.1.A  ALML-LDDECELYVLELSSFQLE----TTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYEN---AKVCVVNADD

Target    DFTAEIREAAKSHQIMSFG-AGGDVFATEIELLPQSANFQLHTPQGS--SFVRLPFAGEHNVQNATAAVAFALALGVSLE
1eeh.1.A  ALTMPIRG-A-DERCVSFGVNMGDYHLNHQQGE--TW-LRV--KGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRA

Target    DIVKGLEQAQGAKGRLNFIQKAPHL-FIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGELGDSSWQEHHDLGRDLAE
1eeh.1.A  SSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLH-VDGTLHLLLGGDGKSAD-----FSPLARYLNG

Target    LPLDHIVAVGQFASAALEGAGLHSTKLKAFQTQAEALPFLINLIQTHQPQSMSFLFKGSRFTHMETLMADLMEKL
1eeh.1.A  D-NVRLYCFGRDGAQLAALRPEVAEQTETMEQ-------AMRLLAPRVQPGDMVLLS------------------

Materials and Methods

Template Search

Template search with Blast and HHBlits has been performed against the SWISS-MODEL template library (SMTL, last update: 2017-10-11, last included PDB release: 2017-10-06).

The target sequence was searched with BLAST (Altschul et al., 1997) against the primary amino acid sequence contained in the SMTL. A total of 24 templates were found.

An initial HHblits profile has been built using the procedure outlined in (Remmert, et al., 2011), followed by 1 iteration of HHblits against NR20. The obtained profile has then be searched against all profiles of the SMTL. A total of 420 templates were found.

Template Selection

For each identified template, the template's quality has been predicted from features of the target-template alignment. The templates with the highest quality have then been selected for model building.

Model Building

Models are built based on the target-template alignment using ProMod3. Coordinates which are conserved between the target and the template are copied from the template to the model. Insertions and deletions are remodelled using a fragment library. Side chains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field. In case loop modelling with ProMod3 fails, an alternative model is built with PROMOD-II (Guex, et al., 1997).

Model Quality Estimation

The global and per-residue model quality has been assessed using the QMEAN scoring function (Benkert, et al., 2011) . For improved performance, weights of the individual QMEAN terms have been trained specifically for SWISS-MODEL.

Ligand Modelling

Ligands present in the template structure are transferred by homology to the model when the following criteria are met (Gallo -Casserino, to be published): (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contact with the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between the target and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The model summary includes information on why and which ligand has not been included.

Oligomeric State Conservation

Homo-oligomeric structure of the target protein is predicted based on the analysis of pairwise interfaces of the identified template structures. For each relevant interface between polypeptide chains (interfaces with more than 10 residue-residue interactions), the QscoreOligomer (Mariani et al., 2011) is predicted from features such as similarity to target and frequency of observing this interface in the identified templates (Kiefer, Bertoni, Biasini, to be published). The prediction is performed with a random forest regressor using these features as input parameters to predict the probability of conservation for each interface. The QscoreOligomer of the whole complex is then calculated as the weight-averaged QscoreOligomer of the interfaces. The oligomeric state of the target is predicted to be the same as in the template when QscoreOligomer is predicted to be higher or equal to 0.5.

References

Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25, 3389-3402.
Remmert, M., Biegert, A., Hauser, A. and Soding, J. (2012) HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nat Methods, 9, 173-175.
Guex, N. and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis, 18, 2714-2723.
Sali, A. and Blundell, T.L. (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol, 234, 779-815.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350.
Mariani, V., Kiefer, F., Schmidt, T., Haas, J. and Schwede, T. (2011) Assessment of template based protein structure predictions in CASP9. Proteins, 79 Suppl 10, 37-58.

Table T1:

Primary amino acid sequence for which templates were searched and models were built.

MHTSTTSTVPLEPWTAQQLQQATQGYWHKDQIPQTEIKRILTDSRHAESGDAFLALKGERFDAHNFVAQVAANGCQVAIVERPIDAEIAQLVVADTRLAL
GQLGAYRREQNAQLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLLELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAGILNIGT
AHLGEFGGRDGICRAKSEIYHHILPQGVAIIPQQDDFTAEIREAAKSHQIMSFGAGGDVFATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNVQNATAA
VAFALALGVSLEDIVKGLEQAQGAKGRLNFIQKAPHLFIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGELGDSSWQEHHDLGRDLAELPLDHIVAV
GQFASAALEGAGLHSTKLKAFQTQAEALPFLINLIQTHQPQSMSFLFKGSRFTHMETLMADLMEKL

Table T2:

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Coverage	Description
4ziy.1.A	99.14	monomer	HHblits	X-ray	1.85Å	0.60	1.00	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4qf5.1.A	99.14	monomer	HHblits	X-ray	2.80Å	0.60	1.00	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4qdi.1.A	99.14	monomer	HHblits	X-ray	1.80Å	0.60	1.00	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
1gg4.1.A	40.14	monomer	HHblits	X-ray	2.30Å	0.38	0.95	UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE
4cvl.1.A	42.27	monomer	HHblits	X-ray	2.98Å	0.38	0.94	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
4cvm.1.A	42.27	monomer	HHblits	X-ray	2.06Å	0.38	0.94	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D- ALANINE LIGASE
1gg4.1.A	43.41	monomer	BLAST	X-ray	2.30Å	0.40	0.89	UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE
4cvl.1.A	44.79	monomer	BLAST	X-ray	2.98Å	0.40	0.89	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
4cvm.1.A	44.79	monomer	BLAST	X-ray	2.06Å	0.40	0.89	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D- ALANINE LIGASE
3zm5.1.A	28.28	monomer	HHblits	X-ray	2.94Å	0.34	0.93	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
2am2.1.A	28.34	monomer	HHblits	X-ray	2.80Å	0.34	0.93	UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein
3zl8.1.A	32.35	monomer	BLAST	X-ray	1.65Å	0.36	0.88	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
3zl8.1.A	28.50	monomer	HHblits	X-ray	1.65Å	0.34	0.89	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
2xja.1.A	20.46	monomer	HHblits	X-ray	3.00Å	0.29	0.93	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
2wtz.1.A	20.46	monomer	HHblits	X-ray	3.00Å	0.29	0.93	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
4c12.1.A	22.70	homo-dimer	HHblits	X-ray	1.80Å	0.31	0.91	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
4bub.1.A	21.72	monomer	HHblits	X-ray	2.90Å	0.31	0.90	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4bub.2.A	21.72	monomer	HHblits	X-ray	2.90Å	0.31	0.90	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
1e8c.1.A	21.19	monomer	HHblits	X-ray	2.00Å	0.30	0.90	UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
2am2.1.A	31.67	monomer	BLAST	X-ray	2.80Å	0.36	0.77	UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein
3zm5.1.A	31.67	monomer	BLAST	X-ray	2.94Å	0.36	0.77	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
2xpc.1.A	23.06	monomer	HHblits	X-ray	1.49Å	0.31	0.83	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
3lk7.1.A	20.26	monomer	HHblits	X-ray	1.50Å	0.30	0.84	UDP-N-acetylmuramoylalanine--D-glutamate ligase
2y67.1.A	23.08	monomer	HHblits	X-ray	1.85Å	0.31	0.81	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5f.1.A	23.14	monomer	HHblits	X-ray	1.90Å	0.31	0.81	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
1uag.1.A	23.12	monomer	HHblits	X-ray	1.95Å	0.31	0.80	UDP-N-ACETYLMURAMOYL-L-ALANINE/:D-GLUTAMATE LIGASE
1eeh.1.A	23.12	monomer	HHblits	X-ray	1.90Å	0.31	0.80	UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
2uag.1.A	23.12	monomer	HHblits	X-ray	1.70Å	0.31	0.80	PROTEIN (UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE)
1e0d.1.A	23.12	monomer	HHblits	X-ray	2.40Å	0.31	0.80	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5e.1.A	23.12	monomer	HHblits	X-ray	1.84Å	0.31	0.80	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
3hn7.1.A	19.00	monomer	HHblits	X-ray	1.65Å	0.28	0.81	UDP-N-acetylmuramate-L-alanine ligase
4buc.1.A	14.36	monomer	HHblits	X-ray	2.17Å	0.28	0.81	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
4buc.2.A	14.36	monomer	HHblits	X-ray	2.17Å	0.28	0.81	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
2f00.1.A	22.07	homo-dimer	HHblits	X-ray	2.50Å	0.31	0.77	UDP-N-acetylmuramate--L-alanine ligase
1p3d.1.A	20.51	monomer	HHblits	X-ray	1.70Å	0.30	0.75	UDP-N-acetylmuramate--alanine ligase
1gqq.1.A	20.51	homo-dimer	HHblits	X-ray	3.10Å	0.30	0.75	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1gqq.1.B	20.51	homo-dimer	HHblits	X-ray	3.10Å	0.30	0.75	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1p31.1.A	20.51	monomer	HHblits	X-ray	1.85Å	0.30	0.75	UDP-N-acetylmuramate--alanine ligase
1gqy.1.B	20.51	homo-dimer	HHblits	X-ray	1.80Å	0.30	0.75	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1gqy.1.A	20.51	homo-dimer	HHblits	X-ray	1.80Å	0.30	0.75	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
4hv4.1.A	22.79	monomer	HHblits	X-ray	2.25Å	0.30	0.75	UDP-N-acetylmuramate--L-alanine ligase
4hv4.2.A	22.79	monomer	HHblits	X-ray	2.25Å	0.30	0.75	UDP-N-acetylmuramate--L-alanine ligase
1j6u.1.A	18.57	monomer	HHblits	X-ray	2.30Å	0.29	0.75	UDP-N-acetylmuramate-alanine ligase MurC
2vor.1.A	21.07	monomer	HHblits	X-ray	2.30Å	0.30	0.72	FOLYLPOLYGLUTAMATE SYNTHASE PROTEIN FOLC
1o5z.1.A	19.29	monomer	HHblits	X-ray	2.10Å	0.29	0.72	folylpolyglutamate synthase/dihydrofolate synthase
2gc5.1.A	16.27	monomer	HHblits	X-ray	1.85Å	0.29	0.73	Folylpolyglutamate synthase
2gcb.1.A	16.27	monomer	HHblits	X-ray	2.30Å	0.29	0.73	Folylpolyglutamate synthase
2gc6.1.A	16.27	monomer	HHblits	X-ray	1.90Å	0.28	0.73	Folylpolyglutamate synthase
2gca.1.A	16.32	monomer	HHblits	X-ray	2.40Å	0.28	0.72	Folylpolyglutamate synthase
1fgs.1.A	16.32	monomer	HHblits	X-ray	2.40Å	0.28	0.72	FOLYLPOLYGLUTAMATE SYNTHETASE
1jbw.1.A	16.32	monomer	HHblits	X-ray	1.85Å	0.28	0.72	FOLYLPOLYGLUTAMATE SYNTHASE
1jbv.1.A	16.32	monomer	HHblits	X-ray	1.95Å	0.28	0.72	FOLYLPOLYGLUTAMATE SYNTHASE
1w7k.1.A	20.00	monomer	HHblits	X-ray	2.10Å	0.29	0.71	FOLC BIFUNCTIONAL PROTEIN
1w78.1.A	20.00	monomer	HHblits	X-ray	1.82Å	0.29	0.71	FOLC BIFUNCTIONAL PROTEIN
4c12.1.A	30.49	homo-dimer	BLAST	X-ray	1.80Å	0.34	0.65	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
3nrs.1.A	19.94	monomer	HHblits	X-ray	1.80Å	0.29	0.70	Dihydrofolate:folylpolyglutamate synthetase
3pyz.1.A	19.94	monomer	HHblits	X-ray	2.10Å	0.29	0.70	Bifunctional folylpolyglutamate synthase/dihydrofolate synthase
4bub.1.A	28.07	monomer	BLAST	X-ray	2.90Å	0.35	0.61	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4bub.2.A	28.07	monomer	BLAST	X-ray	2.90Å	0.35	0.61	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4hv4.1.A	34.69	monomer	BLAST	X-ray	2.25Å	0.36	0.58	UDP-N-acetylmuramate--L-alanine ligase
4hv4.2.A	34.69	monomer	BLAST	X-ray	2.25Å	0.36	0.58	UDP-N-acetylmuramate--L-alanine ligase
3lk7.1.A	27.88	monomer	BLAST	X-ray	1.50Å	0.34	0.58	UDP-N-acetylmuramoylalanine--D-glutamate ligase
2xpc.1.A	30.58	monomer	BLAST	X-ray	1.49Å	0.35	0.52	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
2y67.1.A	30.58	monomer	BLAST	X-ray	1.85Å	0.35	0.52	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5vvw.1.A	31.69	homo-tetramer	BLAST	X-ray	2.30Å	0.35	0.52	UDP-N-acetylmuramate--L-alanine ligase
5vvw.1.A	27.54	homo-tetramer	HHblits	X-ray	2.30Å	0.33	0.51	UDP-N-acetylmuramate--L-alanine ligase
3eag.1.A	17.27	homo-dimer	HHblits	X-ray	2.55Å	0.28	0.53	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
3eag.1.B	17.27	homo-dimer	HHblits	X-ray	2.55Å	0.28	0.53	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
1uag.1.A	32.14	monomer	BLAST	X-ray	1.95Å	0.37	0.36	UDP-N-ACETYLMURAMOYL-L-ALANINE/:D-GLUTAMATE LIGASE
1eeh.1.A	32.14	monomer	BLAST	X-ray	1.90Å	0.37	0.36	UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
2uag.1.A	32.14	monomer	BLAST	X-ray	1.70Å	0.37	0.36	PROTEIN (UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE)
1e0d.1.A	32.14	monomer	BLAST	X-ray	2.40Å	0.37	0.36	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5e.1.A	32.14	monomer	BLAST	X-ray	1.84Å	0.37	0.36	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5f.1.A	32.14	monomer	BLAST	X-ray	1.90Å	0.37	0.36	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
3mvn.1.A	15.20	monomer	HHblits	X-ray	1.90Å	0.27	0.27	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-medo-diaminopimelate ligase
2obn.1.A	18.69	homo-dimer	HHblits	X-ray	2.30Å	0.29	0.23	Hypothetical protein
2obn.1.B	18.69	homo-dimer	HHblits	X-ray	2.30Å	0.29	0.23	Hypothetical protein
2lrh.1.A	7.32	monomer	HHblits	NMR	NA	0.26	0.18	De novo designed protein
2lci.1.A	7.32	monomer	HHblits	NMR	NA	0.26	0.18	Protein OR36
2l69.1.A	11.11	monomer	HHblits	NMR	NA	0.26	0.17	Rossmann 2x3 fold protein
2mr6.1.A	9.76	monomer	HHblits	NMR	NA	0.25	0.18	De novo designed Protein OR462
2mr5.1.A	8.54	monomer	HHblits	NMR	NA	0.23	0.18	De novo designed Protein OR457
4j29.1.A	8.64	homo-dimer	HHblits	X-ray	2.10Å	0.24	0.17	Engineered Protein OR258
5gaj.1.A	8.64	monomer	HHblits	NMR	NA	0.24	0.17	DE NOVO DESIGNED PROTEIN OR258
2lta.1.A	11.69	monomer	HHblits	NMR	NA	0.25	0.17	De novo designed protein
3qw4.1.B	15.49	homo-tetramer	HHblits	X-ray	3.00Å	0.25	0.15	UMP synthase
3qw4.1.A	15.49	homo-tetramer	HHblits	X-ray	3.00Å	0.25	0.15	UMP synthase
3wsd.1.A	11.94	homo-hexamer	HHblits	X-ray	2.50Å	0.27	0.14	Putative GTP cyclohydrolase 1 type 2
1su1.1.A	15.38	homo-tetramer	HHblits	X-ray	2.25Å	0.28	0.14	Hypothetical protein yfcE
1su1.1.C	15.38	homo-tetramer	HHblits	X-ray	2.25Å	0.28	0.14	Hypothetical protein yfcE
2nyd.1.A	13.43	homo-hexamer	HHblits	X-ray	2.00Å	0.26	0.14	UPF0135 protein SA1388
3lnl.1.A	13.43	homo-hexamer	HHblits	X-ray	2.00Å	0.26	0.14	UPF0135 protein SA1388
4iyp.1.B	11.76	hetero-oligomer	HHblits	X-ray	2.80Å	0.24	0.15	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
1uf3.1.A	9.52	homo-octamer	HHblits	X-ray	2.10Å	0.26	0.14	hypothetical protein TT1561
1uf3.1.C	9.52	homo-octamer	HHblits	X-ray	2.10Å	0.26	0.14	hypothetical protein TT1561
2r94.1.A	18.33	homo-tetramer	HHblits	X-ray	2.20Å	0.26	0.13	2-Keto-3-deoxy-(6-phospho-)gluconate aldolase
2nux.1.A	17.24	homo-tetramer	HHblits	X-ray	2.50Å	0.27	0.12	2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase
2yda.1.A	14.04	homo-tetramer	HHblits	X-ray	1.91Å	0.28	0.12	2-KETO-3-DEOXY GLUCONATE ALDOLASE
1w3n.1.A	14.04	homo-tetramer	HHblits	X-ray	2.10Å	0.28	0.12	2-KETO-3-DEOXY GLUCONATE ALDOLASE
1w3i.1.A	14.04	homo-tetramer	HHblits	X-ray	1.70Å	0.28	0.12	2-KETO-3-DEOXY GLUCONATE ALDOLASE
3lcg.1.A	25.93	homo-tetramer	HHblits	X-ray	1.78Å	0.31	0.12	N-acetylneuraminate lyase
3lcx.1.A	25.93	homo-tetramer	HHblits	X-ray	1.98Å	0.30	0.12	N-acetylneuraminate lyase
5ekz.1.A	3.39	monomer	HHblits	X-ray	2.00Å	0.23	0.13	Translational activator of cytochrome c oxidase 1
3lci.1.A	26.00	homo-tetramer	HHblits	X-ray	2.12Å	0.30	0.11	N-acetylneuraminate lyase
5afd.1.A	20.00	homo-tetramer	HHblits	X-ray	1.65Å	0.28	0.11	N-ACETYLNEURAMINATE LYASE
4mpq.1.A	12.00	homo-hexamer	HHblits	X-ray	1.75Å	0.26	0.11	Dihydrodipicolinate synthetase
2hmc.1.A	10.00	homo-hexamer	HHblits	X-ray	1.90Å	0.25	0.11	Dihydrodipicolinate synthase
5czj.1.A	10.00	monomer	HHblits	X-ray	1.92Å	0.25	0.11	Dihydrodipicolinate synthase
1rz3.1.A	24.44	monomer	HHblits	X-ray	1.90Å	0.29	0.10	hypothetical protein RBSTP0775
5mvr.1.A	25.64	monomer	HHblits	X-ray	1.76Å	0.32	0.08	tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
1xjc.1.A	26.47	monomer	HHblits	X-ray	2.10Å	0.30	0.07	MobB protein homolog
2bek.1.A	44.83	homo-dimer	HHblits	X-ray	1.80Å	0.38	0.06	SEGREGATION PROTEIN
1wcv.1.A	44.83	homo-dimer	HHblits	X-ray	1.60Å	0.38	0.06	SEGREGATION PROTEIN
2bej.1.A	44.83	homo-dimer	HHblits	X-ray	2.10Å	0.38	0.06	SEGREGATION PROTEIN
4oyh.1.A	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.2.A	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.2.B	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.3.A	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.3.B	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.1.A	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.2.A	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.2.B	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.3.A	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.3.B	25.81	homo-dimer	HHblits	X-ray	2.41Å	0.31	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
3cio.1.A	24.14	homo-dimer	HHblits	X-ray	2.50Å	0.36	0.06	Tyrosine-protein kinase etk
3cio.1.B	24.14	homo-dimer	HHblits	X-ray	2.50Å	0.36	0.06	Tyrosine-protein kinase etk
1p9n.1.A	25.81	homo-dimer	HHblits	X-ray	2.80Å	0.29	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
1p9n.1.B	25.81	homo-dimer	HHblits	X-ray	2.80Å	0.29	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
1np6.1.A	25.81	homo-dimer	HHblits	X-ray	1.90Å	0.29	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
1np6.1.B	25.81	homo-dimer	HHblits	X-ray	1.90Å	0.29	0.07	Molybdopterin-guanine dinucleotide biosynthesis protein B
4v02.1.A	40.74	hetero-oligomer	HHblits	X-ray	2.70Å	0.40	0.06	SITE-DETERMINING PROTEIN
3fwy.1.A	39.29	homo-dimer	HHblits	X-ray	1.63Å	0.36	0.06	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
3fwy.1.B	39.29	homo-dimer	HHblits	X-ray	1.63Å	0.36	0.06	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
3la6.1.F	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.1.B	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.1.C	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.1.D	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.1.E	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.1.A	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.1.G	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.1.H	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3la6.2.C	27.59	homo-octamer	HHblits	X-ray	3.20Å	0.33	0.06	Tyrosine-protein kinase wzc
3ndb.1.B	39.29	hetero-oligomer	HHblits	X-ray	3.00Å	0.36	0.06	Signal recognition 54 kDa protein
5j1j.1.A	39.29	homo-dimer	HHblits	X-ray	1.55Å	0.36	0.06	Site-determining protein
5j1j.1.B	39.29	homo-dimer	HHblits	X-ray	1.55Å	0.36	0.06	Site-determining protein
5jvf.1.A	39.29	monomer	HHblits	X-ray	1.66Å	0.36	0.06	Site-determining protein
4rz3.1.A	31.03	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.06	Site-determining protein
4rz3.1.B	31.03	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.06	Site-determining protein
3syn.2.A	42.86	hetero-oligomer	HHblits	X-ray	3.06Å	0.36	0.06	Flagellar biosynthesis protein flhF
2px0.1.B	42.86	homo-dimer	HHblits	X-ray	3.00Å	0.36	0.06	Flagellar biosynthesis protein flhF
2px0.3.B	42.86	homo-dimer	HHblits	X-ray	3.00Å	0.36	0.06	Flagellar biosynthesis protein flhF
2px0.4.A	42.86	homo-dimer	HHblits	X-ray	3.00Å	0.36	0.06	Flagellar biosynthesis protein flhF
2px3.1.A	42.86	homo-dimer	HHblits	X-ray	3.20Å	0.36	0.06	Flagellar biosynthesis protein flhF
2px0.1.A	42.86	homo-dimer	HHblits	X-ray	3.00Å	0.36	0.06	Flagellar biosynthesis protein flhF
3md0.1.A	31.03	homo-dimer	HHblits	X-ray	2.45Å	0.33	0.06	Arginine/ornithine transport system ATPase
1rw4.1.A	28.57	homo-dimer	HHblits	X-ray	2.50Å	0.35	0.06	Nitrogenase iron protein 1
5u1g.1.A	44.44	hetero-oligomer	HHblits	X-ray	3.64Å	0.38	0.06	ParA
5u1g.2.B	44.44	hetero-oligomer	HHblits	X-ray	3.64Å	0.38	0.06	ParA
4e07.1.A	44.44	monomer	HHblits	X-ray	2.90Å	0.38	0.06	Plasmid partitioning protein ParF
4e09.1.A	44.44	homo-dimer	HHblits	X-ray	2.99Å	0.38	0.06	Plasmid partitioning protein ParF
4e03.1.A	44.44	monomer	HHblits	X-ray	2.45Å	0.38	0.06	Plasmid partitioning protein ParF
4e03.2.A	44.44	monomer	HHblits	X-ray	2.45Å	0.38	0.06	Plasmid partitioning protein ParF
4dzz.1.A	44.44	monomer	HHblits	X-ray	1.80Å	0.38	0.06	Plasmid partitioning protein ParF
4dzz.2.A	44.44	monomer	HHblits	X-ray	1.80Å	0.38	0.06	Plasmid partitioning protein ParF
4v03.1.A	37.04	homo-dimer	HHblits	X-ray	1.90Å	0.38	0.06	SITE-DETERMINING PROTEIN
5gaf.1.7	32.14	hetero-oligomer	HHblits	EM	NA	0.35	0.06	Signal recognition particle protein
2ynm.1.A	40.74	hetero-oligomer	HHblits	X-ray	2.10Å	0.38	0.06	LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN
1zu5.1.A	28.57	monomer	HHblits	X-ray	2.40Å	0.35	0.06	ftsY
1zu4.1.A	28.57	monomer	HHblits	X-ray	1.95Å	0.35	0.06	ftsY
3a4l.1.A	39.29	homo-dimer	HHblits	X-ray	1.80Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
3a4l.1.B	39.29	homo-dimer	HHblits	X-ray	1.80Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
3am1.1.C	39.29	homo-dimer	HHblits	X-ray	2.40Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
4c7o.1.A	32.14	hetero-oligomer	HHblits	X-ray	2.60Å	0.35	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
4c7o.2.A	32.14	hetero-oligomer	HHblits	X-ray	2.60Å	0.35	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j37.1.G	39.29	hetero-oligomer	HHblits	EM	8.00Å	0.35	0.06	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN (SRP54)
5l3q.1.A	39.29	hetero-oligomer	HHblits	X-ray	3.20Å	0.35	0.06	Signal recognition particle 54 kDa protein
4ue5.1.D	39.29	hetero-oligomer	HHblits	EM	9.00Å	0.35	0.06	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN
4rz2.1.A	27.59	monomer	HHblits	X-ray	2.80Å	0.32	0.06	Site-determining protein
2cnw.1.B	37.04	hetero-oligomer	HHblits	X-ray	2.39Å	0.37	0.06	CELL DIVISION PROTEIN FTSY
2iyl.1.A	37.04	monomer	HHblits	X-ray	2.10Å	0.37	0.06	CELL DIVISION PROTEIN FTSY
2cnw.2.B	37.04	hetero-oligomer	HHblits	X-ray	2.39Å	0.37	0.06	CELL DIVISION PROTEIN FTSY
2j7p.1.B	37.04	hetero-oligomer	HHblits	X-ray	1.97Å	0.37	0.06	CELL DIVISION PROTEIN FTSY
3k9h.1.A	33.33	homo-dimer	HHblits	X-ray	2.25Å	0.37	0.06	PF-32 protein
3k9g.1.A	33.33	homo-dimer	HHblits	X-ray	2.25Å	0.37	0.06	PF-32 protein
5k5z.1.A	37.04	homo-dimer	HHblits	X-ray	2.37Å	0.37	0.06	ParA
5k5z.2.A	37.04	homo-dimer	HHblits	X-ray	2.37Å	0.37	0.06	ParA
5k5z.2.B	37.04	homo-dimer	HHblits	X-ray	2.37Å	0.37	0.06	ParA
4jlv.1.A	17.24	monomer	HHblits	X-ray	2.20Å	0.31	0.06	C-terminal fragment of Membrane protein CapA1, Putative uncharacterized protein capB1
4jmp.1.A	20.69	monomer	HHblits	X-ray	1.30Å	0.31	0.06	C-terminal fragment of CapA, Protein tyrosine kinase
3bfv.1.A	20.69	monomer	HHblits	X-ray	1.80Å	0.31	0.06	Membrane protein CapA1, Protein tyrosine kinase
2v3c.1.B	40.74	hetero-oligomer	HHblits	X-ray	2.50Å	0.37	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
2v3c.2.B	40.74	hetero-oligomer	HHblits	X-ray	2.50Å	0.37	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
3fmi.1.A	25.00	homo-dimer	HHblits	X-ray	2.18Å	0.34	0.06	Dethiobiotin synthetase
3fmi.1.B	25.00	homo-dimer	HHblits	X-ray	2.18Å	0.34	0.06	Dethiobiotin synthetase
3fmf.2.A	25.00	homo-dimer	HHblits	X-ray	2.05Å	0.34	0.06	Dethiobiotin synthetase
3kl4.1.A	35.71	hetero-oligomer	HHblits	X-ray	3.50Å	0.34	0.06	Signal recognition 54 kDa protein
1ion.1.A	29.63	monomer	HHblits	X-ray	2.30Å	0.37	0.06	PROBABLE CELL DIVISION INHIBITOR MIND
1a7j.1.A	33.33	monomer	HHblits	X-ray	2.50Å	0.37	0.06	PHOSPHORIBULOKINASE
3tqc.1.A	42.31	homo-dimer	HHblits	X-ray	2.30Å	0.39	0.06	Pantothenate kinase
4f7w.1.B	42.31	homo-dimer	HHblits	X-ray	2.10Å	0.39	0.06	Pantothenate kinase
4f7w.1.A	42.31	homo-dimer	HHblits	X-ray	2.10Å	0.39	0.06	Pantothenate kinase
4f7w.3.A	42.31	homo-dimer	HHblits	X-ray	2.10Å	0.39	0.06	Pantothenate kinase
4f7w.4.B	42.31	homo-dimer	HHblits	X-ray	2.10Å	0.39	0.06	Pantothenate kinase
4ne2.2.A	42.31	homo-dimer	HHblits	X-ray	1.90Å	0.39	0.06	Pantothenate kinase
1sq5.1.A	42.31	homo-dimer	HHblits	X-ray	2.20Å	0.39	0.06	Pantothenate kinase
1esm.1.A	42.31	homo-dimer	HHblits	X-ray	2.50Å	0.39	0.06	PANTOTHENATE KINASE
1esm.1.B	42.31	homo-dimer	HHblits	X-ray	2.50Å	0.39	0.06	PANTOTHENATE KINASE
1esn.1.A	42.31	homo-dimer	HHblits	X-ray	2.60Å	0.39	0.06	PANTOTHENATE KINASE
1esn.1.B	42.31	homo-dimer	HHblits	X-ray	2.60Å	0.39	0.06	PANTOTHENATE KINASE
1esn.2.B	42.31	homo-dimer	HHblits	X-ray	2.60Å	0.39	0.06	PANTOTHENATE KINASE
2xxa.1.A	33.33	hetero-oligomer	HHblits	X-ray	3.94Å	0.36	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2xxa.2.A	33.33	hetero-oligomer	HHblits	X-ray	3.94Å	0.36	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
5nco.1.9	33.33	hetero-oligomer	HHblits	EM	4.80Å	0.36	0.06	Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein
5gad.1.7	33.33	hetero-oligomer	HHblits	EM	NA	0.36	0.06	Signal recognition particle protein Ffh
2j28.1.H	33.33	hetero-oligomer	HHblits	EM	8.00Å	0.36	0.06	SIGNAL RECOGNITION PARTICLE 54
5l3r.1.A	35.71	hetero-oligomer	HHblits	X-ray	2.50Å	0.33	0.06	Signal recognition particle 54 kDa protein, chloroplastic
4ak9.1.A	28.57	homo-dimer	HHblits	X-ray	1.80Å	0.33	0.06	CPFTSY
1j8m.1.A	35.71	monomer	HHblits	X-ray	2.00Å	0.33	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
2xxa.1.B	32.14	hetero-oligomer	HHblits	X-ray	3.94Å	0.33	0.06	SRP RECEPTOR FTSY
5nco.1.c	32.14	hetero-oligomer	HHblits	EM	4.80Å	0.33	0.06	Signal recognition particle receptor FtsY
2qy9.1.A	32.14	monomer	HHblits	X-ray	1.90Å	0.33	0.06	Cell division protein ftsY
1hyq.1.A	33.33	monomer	HHblits	X-ray	2.60Å	0.36	0.06	CELL DIVISION INHIBITOR (MIND-1)
3c8u.1.A	33.33	monomer	HHblits	X-ray	1.95Å	0.36	0.06	Fructokinase
2ved.1.A	17.24	homo-octamer	HHblits	X-ray	2.60Å	0.30	0.06	MEMBRANE PROTEIN CAPA1, PROTEIN TYROSINE KINASE
3dm9.1.A	35.71	homo-hexamer	HHblits	X-ray	2.20Å	0.33	0.06	Signal recognition particle receptor
3e70.1.A	35.71	monomer	HHblits	X-ray	1.97Å	0.33	0.06	Signal recognition particle receptor
3dmd.1.F	35.71	homo-hexamer	HHblits	X-ray	2.21Å	0.33	0.06	Signal recognition particle receptor
3dmd.1.E	35.71	homo-hexamer	HHblits	X-ray	2.21Å	0.33	0.06	Signal recognition particle receptor
5l3r.1.B	32.14	hetero-oligomer	HHblits	X-ray	2.50Å	0.33	0.06	Cell division protein FtsY homolog, chloroplastic
3b9q.1.A	32.14	monomer	HHblits	X-ray	1.75Å	0.33	0.06	Chloroplast SRP receptor homolog, alpha subunit CPFTSY
2og2.1.A	32.14	monomer	HHblits	X-ray	2.00Å	0.33	0.06	Putative signal recognition particle receptor
2g0t.1.A	28.57	homo-dimer	HHblits	X-ray	2.67Å	0.33	0.06	conserved hypothetical protein
3jaj.45.A	40.74	monomer	HHblits	EM	NA	0.35	0.06	SRP54
3jan.45.A	40.74	monomer	HHblits	EM	NA	0.35	0.06	SRP54
5u1j.1.A	33.33	homo-dimer	HHblits	X-ray	2.95Å	0.35	0.06	Uncharacterized protein
5u1j.1.B	33.33	homo-dimer	HHblits	X-ray	2.95Å	0.35	0.06	Uncharacterized protein
5u1j.2.A	33.33	homo-dimer	HHblits	X-ray	2.95Å	0.35	0.06	Uncharacterized protein
5u1j.2.B	33.33	homo-dimer	HHblits	X-ray	2.95Å	0.35	0.06	Uncharacterized protein
1de0.1.A	29.63	homo-dimer	HHblits	X-ray	2.40Å	0.35	0.06	NITROGENASE IRON PROTEIN
1xcp.1.A	29.63	homo-dimer	HHblits	X-ray	3.20Å	0.35	0.06	Nitrogenase iron protein 1
1xcp.2.A	29.63	homo-dimer	HHblits	X-ray	3.20Å	0.35	0.06	Nitrogenase iron protein 1
4wzb.1.F	29.63	hetero-oligomer	HHblits	X-ray	2.30Å	0.35	0.06	Nitrogenase iron protein 1
4wzb.1.E	29.63	hetero-oligomer	HHblits	X-ray	2.30Å	0.35	0.06	Nitrogenase iron protein 1
3adb.1.A	40.74	homo-dimer	HHblits	X-ray	2.80Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
3adc.1.B	40.74	homo-dimer	HHblits	X-ray	2.90Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
3adc.1.A	40.74	homo-dimer	HHblits	X-ray	2.90Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
3adb.1.B	40.74	homo-dimer	HHblits	X-ray	2.80Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
3add.1.B	40.74	homo-dimer	HHblits	X-ray	2.40Å	0.35	0.06	L-seryl-tRNA(Sec) kinase
2ph1.1.A	28.57	homo-dimer	HHblits	X-ray	2.70Å	0.32	0.06	Nucleotide-binding protein
3dm5.1.A	29.63	homo-tetramer	HHblits	X-ray	2.51Å	0.35	0.06	Signal recognition 54 kDa protein
1g20.1.E	29.63	hetero-oligomer	HHblits	X-ray	2.20Å	0.35	0.06	NITROGENASE IRON PROTEIN
1g21.1.H	29.63	hetero-oligomer	HHblits	X-ray	3.00Å	0.35	0.06	NITROGENASE IRON PROTEIN
1g21.1.E	29.63	hetero-oligomer	HHblits	X-ray	3.00Å	0.35	0.06	NITROGENASE IRON PROTEIN
3r9i.1.B	25.93	hetero-oligomer	HHblits	X-ray	2.60Å	0.35	0.06	Septum site-determining protein minD
3q9l.1.A	25.93	homo-dimer	HHblits	X-ray	2.34Å	0.35	0.06	Septum site-determining protein minD
5aun.1.B	21.43	hetero-oligomer	HHblits	X-ray	1.63Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.A	21.43	homo-dimer	HHblits	X-ray	2.10Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
5auq.3.A	21.43	homo-dimer	HHblits	X-ray	2.53Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.B	21.43	homo-dimer	HHblits	X-ray	2.10Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
4c7o.1.B	32.14	hetero-oligomer	HHblits	X-ray	2.60Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY
5l3v.1.A	37.04	monomer	HHblits	X-ray	2.30Å	0.35	0.06	Signal recognition particle 54 kDa protein
5l3v.2.A	37.04	monomer	HHblits	X-ray	2.30Å	0.35	0.06	Signal recognition particle 54 kDa protein
1qzw.1.B	37.04	monomer	HHblits	X-ray	4.10Å	0.35	0.06	Signal recognition 54 kDa protein
1qzx.1.A	37.04	monomer	HHblits	X-ray	4.00Å	0.35	0.06	Signal recognition 54 kDa protein
1g3r.1.A	29.63	monomer	HHblits	X-ray	2.70Å	0.35	0.06	CELL DIVISION INHIBITOR
5l3s.1.B	32.14	hetero-oligomer	HHblits	X-ray	1.90Å	0.32	0.06	Signal recognition particle receptor FtsY
5l3s.2.B	32.14	hetero-oligomer	HHblits	X-ray	1.90Å	0.32	0.06	Signal recognition particle receptor FtsY
5l3s.3.B	32.14	hetero-oligomer	HHblits	X-ray	1.90Å	0.32	0.06	Signal recognition particle receptor FtsY
5l3s.4.B	32.14	hetero-oligomer	HHblits	X-ray	1.90Å	0.32	0.06	Signal recognition particle receptor FtsY
2pbr.1.B	37.04	homo-dimer	HHblits	X-ray	1.96Å	0.34	0.06	Thymidylate kinase
2pbr.1.A	37.04	homo-dimer	HHblits	X-ray	1.96Å	0.34	0.06	Thymidylate kinase
4s35.1.B	37.04	homo-dimer	HHblits	X-ray	1.55Å	0.34	0.06	Thymidylate kinase
5xb2.1.B	37.04	homo-dimer	HHblits	X-ray	2.16Å	0.34	0.06	Thymidylate kinase
5xbh.1.A	37.04	homo-dimer	HHblits	X-ray	2.23Å	0.34	0.06	Thymidylate kinase
2ax4.1.A	35.71	homo-dimer	HHblits	X-ray	2.50Å	0.31	0.06	Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 2
2xj4.1.A	28.57	monomer	HHblits	X-ray	1.60Å	0.31	0.06	MIPZ
2xit.1.A	28.57	homo-dimer	HHblits	X-ray	1.80Å	0.31	0.06	MIPZ
2xj9.1.A	28.57	homo-dimer	HHblits	X-ray	2.80Å	0.31	0.06	MIPZ
2xj9.1.B	28.57	homo-dimer	HHblits	X-ray	2.80Å	0.31	0.06	MIPZ
1okk.1.B	38.46	hetero-oligomer	HHblits	X-ray	2.05Å	0.37	0.06	CELL DIVISION PROTEIN FTSY
2xkv.1.D	38.46	hetero-oligomer	HHblits	EM	13.50Å	0.37	0.06	CELL DIVISION PROTEIN FTSY
1rj9.1.A	38.46	hetero-oligomer	HHblits	X-ray	1.90Å	0.37	0.06	Signal Recognition Protein
1e9c.1.A	28.57	homo-dimer	HHblits	X-ray	1.60Å	0.31	0.06	THYMIDYLATE KINASE
2xx3.1.A	28.57	homo-dimer	HHblits	X-ray	2.00Å	0.31	0.06	THYMIDYLATE KINASE
5l3w.1.A	32.14	monomer	HHblits	X-ray	2.40Å	0.31	0.06	Signal recognition particle receptor FtsY
1vma.1.A	28.57	monomer	HHblits	X-ray	1.60Å	0.31	0.06	cell division protein FtsY
5l3s.1.A	33.33	hetero-oligomer	HHblits	X-ray	1.90Å	0.34	0.06	Signal recognition particle 54 kDa protein
5l3s.4.A	33.33	hetero-oligomer	HHblits	X-ray	1.90Å	0.34	0.06	Signal recognition particle 54 kDa protein
5gad.1.9	33.33	hetero-oligomer	HHblits	EM	NA	0.34	0.06	Signal recognition particle receptor FtsY
2yhs.1.A	33.33	monomer	HHblits	X-ray	1.60Å	0.34	0.06	CELL DIVISION PROTEIN FTSY
1fts.1.A	33.33	monomer	HHblits	X-ray	2.20Å	0.34	0.06	FTSY
1xd9.1.A	29.63	homo-dimer	HHblits	X-ray	2.80Å	0.34	0.06	Nitrogenase iron protein 1
3h86.2.A	38.46	homo-trimer	HHblits	X-ray	2.50Å	0.36	0.06	Adenylate kinase
3h86.1.B	38.46	homo-trimer	HHblits	X-ray	2.50Å	0.36	0.06	Adenylate kinase
3h86.1.C	38.46	homo-trimer	HHblits	X-ray	2.50Å	0.36	0.06	Adenylate kinase
3h86.1.A	38.46	homo-trimer	HHblits	X-ray	2.50Å	0.36	0.06	Adenylate kinase
4wop.1.A	25.93	homo-dimer	HHblits	X-ray	2.39Å	0.33	0.06	ATP-dependent dethiobiotin synthetase BioD
2ofx.1.A	32.14	homo-dimer	HHblits	X-ray	1.90Å	0.30	0.06	Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1
3avo.1.A	34.62	homo-dimer	HHblits	X-ray	2.55Å	0.36	0.06	Pantothenate kinase
3n2i.1.A	25.93	homo-dimer	HHblits	X-ray	2.25Å	0.33	0.06	Thymidylate kinase
1j8y.1.A	33.33	monomer	HHblits	X-ray	2.00Å	0.33	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
3of5.1.A	21.43	homo-dimer	HHblits	X-ray	1.52Å	0.30	0.06	Dethiobiotin synthetase
3ug7.1.A	25.00	homo-tetramer	HHblits	X-ray	2.90Å	0.30	0.06	arsenical pump-driving ATPase
3ug6.1.A	25.00	homo-tetramer	HHblits	X-ray	3.30Å	0.30	0.06	arsenical pump-driving ATPase
2oze.1.A	17.86	homo-dimer	HHblits	X-ray	1.83Å	0.30	0.06	Orf delta'
4gmd.1.B	25.93	homo-dimer	HHblits	X-ray	1.98Å	0.33	0.06	Thymidylate kinase
4gmd.1.A	25.93	homo-dimer	HHblits	X-ray	1.98Å	0.33	0.06	Thymidylate kinase
4edh.1.A	25.93	homo-dimer	HHblits	X-ray	1.32Å	0.33	0.06	Thymidylate kinase
4e5u.1.A	25.93	homo-dimer	HHblits	X-ray	1.81Å	0.33	0.06	Thymidylate kinase
4e5u.1.B	25.93	homo-dimer	HHblits	X-ray	1.81Å	0.33	0.06	Thymidylate kinase
3uxm.1.A	25.93	monomer	HHblits	X-ray	1.95Å	0.33	0.06	Thymidylate kinase
3uxm.2.A	25.93	monomer	HHblits	X-ray	1.95Å	0.33	0.06	Thymidylate kinase
3uwk.1.A	25.93	monomer	HHblits	X-ray	1.91Å	0.33	0.06	Thymidylate kinase
3uwo.1.A	25.93	monomer	HHblits	X-ray	1.70Å	0.33	0.06	Thymidylate kinase
2pjz.1.A	22.22	monomer	HHblits	X-ray	1.90Å	0.33	0.06	Hypothetical protein ST1066
1kht.1.A	30.77	homo-trimer	HHblits	X-ray	2.50Å	0.36	0.06	adenylate kinase
1kht.1.B	30.77	homo-trimer	HHblits	X-ray	2.50Å	0.36	0.06	adenylate kinase
1kht.1.C	30.77	homo-trimer	HHblits	X-ray	2.50Å	0.36	0.06	adenylate kinase
1e98.1.A	29.63	homo-dimer	HHblits	X-ray	1.90Å	0.32	0.06	THYMIDYLATE KINASE
1nmy.1.A	29.63	monomer	HHblits	X-ray	1.60Å	0.32	0.06	similar to THYMIDYLATE KINASE (DTMP KINASE)
1e2e.1.A	29.63	homo-dimer	HHblits	X-ray	2.00Å	0.32	0.06	THYMIDYLATE KINASE
2woo.1.A	29.63	homo-dimer	HHblits	X-ray	3.01Å	0.32	0.06	ATPASE GET3
1ffh.1.A	33.33	monomer	HHblits	X-ray	2.05Å	0.32	0.06	FFH
2j7p.1.A	33.33	hetero-oligomer	HHblits	X-ray	1.97Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
3ng1.1.A	33.33	monomer	HHblits	X-ray	2.30Å	0.32	0.06	SIGNAL SEQUENCE RECOGNITION PROTEIN FFH
2cnw.1.A	33.33	hetero-oligomer	HHblits	X-ray	2.39Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2cnw.3.A	33.33	hetero-oligomer	HHblits	X-ray	2.39Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2xkv.1.A	33.33	hetero-oligomer	HHblits	EM	13.50Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
5xb5.1.A	38.46	homo-dimer	HHblits	X-ray	2.23Å	0.35	0.06	Thymidylate kinase
1dts.1.A	25.00	homo-dimer	HHblits	X-ray	1.65Å	0.29	0.06	DETHIOBIOTIN SYNTHETASE
4ypn.1.A	23.08	monomer	HHblits	X-ray	2.07Å	0.35	0.06	Lon protease
3fkq.1.A	14.29	homo-dimer	HHblits	X-ray	2.10Å	0.29	0.06	NtrC-like two-domain protein
3kb1.1.A	21.43	homo-dimer	HHblits	X-ray	2.90Å	0.29	0.06	Nucleotide-binding protein
2q9a.1.A	40.00	monomer	HHblits	X-ray	2.24Å	0.38	0.05	Cell division protein ftsY
2q9a.2.A	40.00	monomer	HHblits	X-ray	2.24Å	0.38	0.05	Cell division protein ftsY
3hjn.1.A	30.77	homo-dimer	HHblits	X-ray	2.10Å	0.35	0.06	Thymidylate kinase
3hjn.1.B	30.77	homo-dimer	HHblits	X-ray	2.10Å	0.35	0.06	Thymidylate kinase
3zq6.1.A	22.22	homo-dimer	HHblits	X-ray	2.11Å	0.32	0.06	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.1.B	22.22	homo-dimer	HHblits	X-ray	2.11Å	0.32	0.06	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.2.A	22.22	homo-dimer	HHblits	X-ray	2.11Å	0.32	0.06	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.2.B	22.22	homo-dimer	HHblits	X-ray	2.11Å	0.32	0.06	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
2i3b.1.A	30.77	monomer	HHblits	NMR	NA	0.34	0.06	Human Cancer-Related NTPase
2ffh.1.A	29.63	monomer	HHblits	X-ray	3.20Å	0.31	0.06	PROTEIN (FFH)
2ng1.1.A	29.63	monomer	HHblits	X-ray	2.02Å	0.31	0.06	SIGNAL SEQUENCE RECOGNITION PROTEIN FFH
1rj9.1.B	29.63	hetero-oligomer	HHblits	X-ray	1.90Å	0.31	0.06	Signal recognition particle protein
2c03.1.A	29.63	monomer	HHblits	X-ray	1.24Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2c03.2.A	29.63	monomer	HHblits	X-ray	1.24Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1jpj.1.A	29.63	monomer	HHblits	X-ray	2.30Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1jpn.1.A	29.63	monomer	HHblits	X-ray	1.90Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1jpn.2.A	29.63	monomer	HHblits	X-ray	1.90Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1ls1.1.A	29.63	monomer	HHblits	X-ray	1.10Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j45.1.A	29.63	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j45.2.A	29.63	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j46.1.A	29.63	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j46.2.A	29.63	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1o87.1.A	29.63	monomer	HHblits	X-ray	2.10Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1o87.2.A	29.63	monomer	HHblits	X-ray	2.10Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2c04.1.A	29.63	monomer	HHblits	X-ray	1.15Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2c04.2.A	29.63	monomer	HHblits	X-ray	1.15Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
4unq.1.A	30.77	monomer	HHblits	X-ray	2.30Å	0.34	0.06	THYMIDYLATE KINASE
4unq.2.A	30.77	monomer	HHblits	X-ray	2.30Å	0.34	0.06	THYMIDYLATE KINASE
4unp.1.A	30.77	monomer	HHblits	X-ray	2.30Å	0.34	0.06	THYMIDYLATE KINASE
1nks.1.C	30.77	homo-trimer	HHblits	X-ray	2.57Å	0.34	0.06	ADENYLATE KINASE
1nks.1.B	30.77	homo-trimer	HHblits	X-ray	2.57Å	0.34	0.06	ADENYLATE KINASE
1nks.1.A	30.77	homo-trimer	HHblits	X-ray	2.57Å	0.34	0.06	ADENYLATE KINASE
4eaq.1.A	29.63	homo-dimer	HHblits	X-ray	1.85Å	0.31	0.06	Thymidylate kinase
4dwj.1.B	29.63	homo-dimer	HHblits	X-ray	2.74Å	0.31	0.06	Thymidylate kinase
1ki9.1.A	30.77	homo-trimer	HHblits	X-ray	2.76Å	0.34	0.06	adenylate kinase
1ki9.1.B	30.77	homo-trimer	HHblits	X-ray	2.76Å	0.34	0.06	adenylate kinase
1ki9.1.C	30.77	homo-trimer	HHblits	X-ray	2.76Å	0.34	0.06	adenylate kinase
3io3.1.A	25.93	monomer	HHblits	X-ray	1.80Å	0.31	0.06	DEHA2D07832p
2f1r.1.A	32.00	homo-dimer	HHblits	X-ray	2.10Å	0.37	0.05	molybdopterin-guanine dinucleotide biosynthesis protein B (mobB)
2f1r.1.B	32.00	homo-dimer	HHblits	X-ray	2.10Å	0.37	0.05	molybdopterin-guanine dinucleotide biosynthesis protein B (mobB)
5cb6.3.B	38.46	homo-dimer	HHblits	X-ray	2.79Å	0.33	0.06	Probable adenylyl-sulfate kinase
5cb6.2.B	38.46	homo-dimer	HHblits	X-ray	2.79Å	0.33	0.06	Probable adenylyl-sulfate kinase
4pfs.1.A	30.77	monomer	HHblits	X-ray	2.30Å	0.33	0.06	Cobyrinic Acid a,c-diamide synthase
4pfs.2.A	30.77	monomer	HHblits	X-ray	2.30Å	0.33	0.06	Cobyrinic Acid a,c-diamide synthase
5if9.1.A	30.77	monomer	HHblits	X-ray	1.80Å	0.33	0.06	Cobyrinic Acid a,c-diamide synthase
3mle.1.A	19.23	homo-dimer	HHblits	X-ray	2.80Å	0.33	0.06	Dethiobiotin synthetase
1dah.1.A	25.93	homo-dimer	HHblits	X-ray	1.64Å	0.30	0.06	DETHIOBIOTIN SYNTHETASE
1byi.1.A	25.93	homo-dimer	HHblits	X-ray	0.97Å	0.30	0.06	DETHIOBIOTIN SYNTHASE
2qmo.1.A	19.23	homo-dimer	HHblits	X-ray	1.47Å	0.33	0.06	Dethiobiotin synthetase
5l3q.1.B	22.22	hetero-oligomer	HHblits	X-ray	3.20Å	0.29	0.06	Signal recognition particle receptor subunit alpha
1p9r.1.A	30.77	monomer	HHblits	X-ray	2.50Å	0.32	0.06	General secretion pathway protein E
2ccg.1.A	30.77	homo-dimer	HHblits	X-ray	2.30Å	0.31	0.06	THYMIDYLATE KINASE
4cvn.1.A	43.48	hetero-oligomer	HHblits	X-ray	2.12Å	0.40	0.05	PUTATIVE ADENYLATE KINASE
3ez9.1.A	26.92	homo-dimer	HHblits	X-ray	2.80Å	0.30	0.06	ParA
3ez9.2.A	26.92	homo-dimer	HHblits	X-ray	2.80Å	0.30	0.06	ParA
3ezf.1.A	26.92	homo-dimer	HHblits	X-ray	2.80Å	0.30	0.06	ParA
3ez7.1.A	24.00	homo-dimer	HHblits	X-ray	2.92Å	0.33	0.05	Plasmid partition protein A
1htw.1.A	24.00	monomer	HHblits	X-ray	1.70Å	0.33	0.05	HI0065
1htw.2.A	24.00	monomer	HHblits	X-ray	1.70Å	0.33	0.05	HI0065
1htw.3.A	24.00	monomer	HHblits	X-ray	1.70Å	0.33	0.05	HI0065
1fl9.1.A	24.00	monomer	HHblits	X-ray	2.50Å	0.33	0.05	HYPOTHETICAL PROTEIN HI0065
1fl9.2.A	24.00	monomer	HHblits	X-ray	2.50Å	0.33	0.05	HYPOTHETICAL PROTEIN HI0065
1fl9.3.A	24.00	monomer	HHblits	X-ray	2.50Å	0.33	0.05	HYPOTHETICAL PROTEIN HI0065
4mqb.1.A	32.00	homo-dimer	HHblits	X-ray	1.55Å	0.32	0.05	Thymidylate kinase
4mqb.1.B	32.00	homo-dimer	HHblits	X-ray	1.55Å	0.32	0.05	Thymidylate kinase
5j1s.1.A	16.00	hetero-oligomer	HHblits	X-ray	1.40Å	0.30	0.05	Torsin-1A
2qor.1.A	20.00	monomer	HHblits	X-ray	1.80Å	0.30	0.05	Guanylate kinase
3ez6.1.A	25.00	homo-dimer	HHblits	X-ray	2.58Å	0.32	0.05	Plasmid partition protein A
3ez6.1.B	25.00	homo-dimer	HHblits	X-ray	2.58Å	0.32	0.05	Plasmid partition protein A
3ez2.1.B	25.00	homo-dimer	HHblits	X-ray	2.05Å	0.32	0.05	Plasmid partition protein A
1xdb.1.A	30.43	homo-dimer	HHblits	X-ray	2.80Å	0.34	0.05	Nitrogenase iron protein 1
4wza.1.E	30.43	hetero-oligomer	HHblits	X-ray	1.90Å	0.34	0.05	Nitrogenase iron protein 1
4wza.1.F	30.43	hetero-oligomer	HHblits	X-ray	1.90Å	0.34	0.05	Nitrogenase iron protein 1
1m34.1.E	30.43	hetero-oligomer	HHblits	X-ray	2.30Å	0.34	0.05	Nitrogenase Iron Protein 1
1m1y.1.E	30.43	hetero-oligomer	HHblits	X-ray	3.20Å	0.34	0.05	nitrogenase IRON protein 1
1m1y.1.F	30.43	hetero-oligomer	HHblits	X-ray	3.20Å	0.34	0.05	nitrogenase IRON protein 1
2afi.1.E	30.43	hetero-oligomer	HHblits	X-ray	3.10Å	0.34	0.05	Nitrogenase iron protein 1
2afh.1.E	30.43	hetero-oligomer	HHblits	X-ray	2.10Å	0.34	0.05	Nitrogenase iron protein 1
2afh.1.F	30.43	hetero-oligomer	HHblits	X-ray	2.10Å	0.34	0.05	Nitrogenase iron protein 1
1g5p.1.A	30.43	homo-dimer	HHblits	X-ray	2.20Å	0.34	0.05	NITROGENASE IRON PROTEIN
1g5p.1.B	30.43	homo-dimer	HHblits	X-ray	2.20Å	0.34	0.05	NITROGENASE IRON PROTEIN
1g1m.1.A	30.43	homo-dimer	HHblits	X-ray	2.25Å	0.34	0.05	NITROGENASE IRON PROTEIN
1g1m.1.B	30.43	homo-dimer	HHblits	X-ray	2.25Å	0.34	0.05	NITROGENASE IRON PROTEIN
1fp6.1.A	30.43	homo-dimer	HHblits	X-ray	2.15Å	0.34	0.05	NITROGENASE IRON PROTEIN
1nip.1.A	30.43	homo-dimer	HHblits	X-ray	2.90Å	0.34	0.05	NITROGENASE IRON PROTEIN
1nip.1.B	30.43	homo-dimer	HHblits	X-ray	2.90Å	0.34	0.05	NITROGENASE IRON PROTEIN
2c8v.1.A	30.43	monomer	HHblits	X-ray	2.50Å	0.34	0.05	NITROGENASE IRON PROTEIN 1
1s96.1.A	16.00	homo-dimer	HHblits	X-ray	2.00Å	0.27	0.05	Guanylate kinase
1cp2.1.A	34.78	homo-dimer	HHblits	X-ray	1.93Å	0.34	0.05	NITROGENASE IRON PROTEIN
1cp2.1.B	34.78	homo-dimer	HHblits	X-ray	1.93Å	0.34	0.05	NITROGENASE IRON PROTEIN
4eun.1.A	26.09	homo-dimer	HHblits	X-ray	1.60Å	0.33	0.05	thermoresistant glucokinase
2grj.1.A	42.86	monomer	HHblits	X-ray	2.60Å	0.39	0.05	Dephospho-CoA kinase
2vp9.1.A	26.09	homo-dimer	HHblits	X-ray	2.90Å	0.32	0.05	DEOXYNUCLEOSIDE KINASE
2vp4.1.A	26.09	homo-tetramer	HHblits	X-ray	2.20Å	0.32	0.05	DEOXYNUCLEOSIDE KINASE
2vp5.1.B	26.09	homo-dimer	HHblits	X-ray	2.30Å	0.32	0.05	DEOXYNUCLEOSIDE KINASE
3ibg.1.A	36.36	homo-dimer	HHblits	X-ray	3.20Å	0.35	0.05	ATPase, subunit of the Get complex
3kjg.2.A	31.82	homo-dimer	HHblits	X-ray	2.30Å	0.33	0.05	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kjg.1.A	31.82	monomer	HHblits	X-ray	2.30Å	0.33	0.05	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kji.1.A	31.82	homo-dimer	HHblits	X-ray	2.13Å	0.33	0.05	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kji.2.A	31.82	homo-dimer	HHblits	X-ray	2.13Å	0.33	0.05	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kjh.1.A	31.82	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.05	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kje.1.A	31.82	monomer	HHblits	X-ray	2.30Å	0.33	0.05	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3hdt.1.A	21.74	homo-dimer	HHblits	X-ray	2.79Å	0.30	0.05	putative kinase
3hdt.1.B	21.74	homo-dimer	HHblits	X-ray	2.79Å	0.30	0.05	putative kinase
3igf.1.A	9.09	homo-dimer	HHblits	X-ray	2.00Å	0.26	0.05	All4481 protein
3igf.1.B	9.09	homo-dimer	HHblits	X-ray	2.00Å	0.26	0.05	All4481 protein