SWISS-MODEL Homology Modelling Report

Model Building Report

This document lists the results for the homology modelling project "S3TJJ5" submitted to SWISS-MODEL workspace on Oct. 17, 2017, 6:32 p.m..The submitted primary amino acid sequence is given in Table T1.

If you use any results in your research, please cite the relevant publications:

Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano Gallo Cassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede. (2014). SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Research (1 July 2014) 42 (W1): W252-W258; doi: 10.1093/nar/gku340.
Arnold, K., Bordoli, L., Kopp, J. and Schwede, T. (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics, 22, 195-201.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350

Results

The SWISS-MODEL template library (SMTL version 2017-10-11, PDB release 2017-10-06) was searched with Blast (Altschul et al., 1997) and HHBlits (Remmert, et al., 2011) for evolutionary related structures matching the target sequence in Table T1. For details on the template search, see Materials and Methods. Overall 533 templates were found (Table T2).

Models

The following models were built (see Materials and Methods "Model Building"):

Model #01

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER
1 x API: 2,6-DIAMINOPIMELIC ACID;
0.69-2.90
QMEAN-2.90
-0.64
All Atom-1.18
Solvation-0.28
Torsion-2.73
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
1e8c.1.A37.64monomerBLASTX-ray2.00Å0.38 18 - 481 0.92UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
LigandAdded to ModelDescription
API
2,6-DIAMINOPIMELIC ACID
CL✕ - Not biologically relevant.
CHLORIDE ION
UAG✕ - Binding site not conserved.
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE-D-GLUTAMATE

Target    MTVSFQEIHPIEIDAQWPQQPFHGFSLDSRKVETGQIFIALTSYSQPEKTRTFAEAALANGALAVISET----------E
1e8c.1.A -----------------PSRALREMTLDSRVAAAGDLFVAVVGHQA--DGRRYIPQAIAQGVAAIIAEAKDEATDGEIRE

Target LGVANEWVCPDVRQRMGEWQKRYLQQADVVKPLRVIAVTGTNGKTTISRLIAELISSQQQRCAVMGTTGNGILPHLTPST
1e8c.1.A MHGVPVIYLSQLNERLSALAGRFYHEPS--DNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTE

Target HTTLDALQLQNALHDYAKQGATFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDHLDYHGTLEAYAEAKARLFQFNSLKV
1e8c.1.A NTTGSAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQ

Target AVINLDDAHADLMIKSAQNNPAQPKILTYSLTQDTADYYI--ADLSYSLAGATFNLVSQQGSFAVESPLLGHFNVENLIA
1e8c.1.A AIINADDEVGRRWL--AKLPDAVAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLL

Target ALIAAEQAGFDLQALVNFVPKLIGAPGRMQVIRDDER-LFVVDYAHTPDALIQVLKTLKRHVSNQLWAVFGCGGDRDRGK
1e8c.1.A ALATLLALGYPLADLLKTAARLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGK

Target RPLMTQAALDGANPVILTSDNPRTEDPEQIFADMKQGIDFSGHRMHEIHDRREAIKFVAEQAQAGDIVVIAGKGHENYQE
1e8c.1.A RPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGH-AKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQI

Target INGVRHWFDDVVEVRSAIDAQHHTVDAAYPAQ
1e8c.1.A VGNQRLDYSDRVTV------------------




Model #02

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER
None
0.54-6.76
QMEAN-6.76
-4.31
All Atom-3.25
Solvation-2.32
Torsion-5.61
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
1gg4.1.A23.44monomerHHblitsX-ray2.30Å0.31 5 - 463 0.84UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE
The template contained no ligands.
Target    MTVSFQEIHPIEIDAQWPQQPFHGFSLDSRKVETGQIFIALTSYSQPEKTRTFAEAALANGALAVISETELGVANE-WVC
1gg4.1.A ----SQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERF--DAHDFADQAKAGGAGALLVSRPLDIDLPQLIV

Target PDVRQRMGEWQKRYLQQADVVKPLRVIAVTGTNGKTTISRLIAELISSQQQRCAVMGTTGNGILPHLTPSTHTTLDALQL
1gg4.1.A KDTRLAFGELAAWVRQ--QV--PARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDI---GVPMT---------

Target QNALHDYAKQGATFASLEAS-SHGLEQGRLNG-CDIEIAVYSNLSRDHLDYHGTLEAYAEAKARLFQFNS-LKVAVINLD
1gg4.1.A ---LLRL-TPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNAD

Target DAHADLMIKSAQNNPAQPKILTYSLTQDTA-DYYIADLSYSLAGATFNLVSQQGSFAVESPLLGHFNVENLIAALIAAEQ
1gg4.1.A NNDWLNWQSVIG----SRKVWRFSP-NAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMS

Target AGFDLQALVNFVPKLIGAPGRMQVIRD-DERLFVVD-YAHTPDALIQVLKTLKRHVSNQLWAVFGCG---GDRDRGKRPL
1gg4.1.A VGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMP-GYRVLVVGDMAELGAESEACHVQ

Target MTQAALDG-ANPVILTSDNPRTEDPEQIFADMKQGIDFSGHRMHEIHDRREAIKFVAEQA-QAG-DIVVIAGKGHENYQE
1gg4.1.A VGEAAKAAGIDRVLSVGKQS-----HAISTASG---V--G---EHFADKTALITRLKLLIAEQQVITILVKGSRSA----

Target INGVRHWFDDVVEVRSAIDAQHHTVDAAYPAQ
1gg4.1.A --------------------------------




Model #03

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER
None
0.52-6.58
QMEAN-6.58
-2.93
All Atom-2.80
Solvation-1.93
Torsion-5.79
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
3zm5.1.A21.64monomerHHblitsX-ray2.94Å0.30 18 - 462 0.81UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
LigandAdded to ModelDescription
IGM✕ - Binding site not conserved.
2,4-BIS(CHLORANYL)-N-[3-CYANO-6-[(4-HYDROXYPHENYL)METHYL]-5,7-DIHYDRO-4H-THIENO[2,3-C]PYRIDIN-2-YL]-5-MORPHOLIN-4-YLSULFONYL-BENZAMIDE

Target    MTVSFQEIHPIEIDAQWPQQPFHGFSLDSRKVETGQIFIALTSYSQPEKTRTFAEAALANGALAVISETELGVANE-WVC
3zm5.1.A -----------------EDTQLEKAEFDSRLIGTGDLFVPLKGA-R--DGHDFIETAFENGAAVTLSEKEVS-NHPYILV

Target PDVRQRMGEWQKRYLQQADVVKPLRVIAVTGTNGKTTISRLIAELISSQQQRCAVMGTTGNGILPHLTPSTHTTLDALQL
3zm5.1.A DDVLTAFQSLASYYLE--KT--TVDVFAVTGSNGKTTTKDMLAHLLSTRYKTYKTQGNYNNEIG---LPYT---------

Target QNALHDYAKQGATFASLEAS-SHGLEQGRLNG-CDIEIAVYSNLSRDHLDYHGTLEAYAEAKARLFQFNS-LKVAVINLD
3zm5.1.A ---VLHM-PEGTEKLVLEMGQDHLGDIHLLSELARPKTAIVTLVGEAHLAFFKDRSEIAKGKMQIADGMASGSLLLAPAD

Target DAHADLMIKSAQNNPAQPKILTYSLTQDTADYYIADLSYSLAGATFNLVSQQGSFAVESPLLGHFNVENLIAALIAAEQA
3zm5.1.A PIVE-DYLP-ID-----KKVVRFGQ-GAELEI--TDLVERKDSLTFKANFLEQ--ALDLPVTGKYNATNAMIASYVALQE

Target GFDLQALVNFVPKLIGAPGRMQVIRD-DERLFVVD-YAHTPDALIQVLKTLKRH---VSNQLWAVFGCG---GDRDRGKR
3zm5.1.A GVSEEQIRLAFQHLELTRNRTEWKKAANGADILSDVYNANPTAMKLILETFSAIPANEGGKKIAVLADMKELGDQSVQLH

Target PLMTQAALDG-ANPVILTSDNPRTEDPEQIFADMKQGIDFSGHRMHEIHD------RREAIKFVAEQAQAGDIVVIAGKG
3zm5.1.A NQMILSLSPDVLDIVIFYGED-----IAQLAQLASQMFPI-G-HVYYFKKTEDQDQFEDLVKQVKESLGAHDQILLKGSN

Target HENYQEINGVRHWFDDVVEVRSAIDAQHHTVDAAYPAQ
3zm5.1.A S-------------------------------------




Model #04

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER
None
0.47-5.68
QMEAN-5.68
-5.44
All Atom-4.01
Solvation-2.78
Torsion-4.21
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
1eeh.1.A20.26monomerHHblitsX-ray1.90Å0.30 24 - 466 0.76UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
LigandAdded to ModelDescription
UMA✕ - Binding site not conserved.
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE

Target    MTVSFQEIHPIEIDAQWPQQPFHGFSLDSRKVETGQIFIALTSYSQPEKTRTFAEAALANGALAVISETELGVANE-WVC
1eeh.1.A -----------------------PRVMDTRMTPPGLDKLP-EAVERHTGSLN---DEWLMAADLIVASPGIALAHPSLSA

Target PD--VRQRMGEWQKRYLQQADVVKPLRVIAVTGTNGKTTISRLIAELISSQQQRCAVMGTTGNGILPHLTPSTHTTLDAL
1eeh.1.A AADAGIEIVGDIELFCRE-----AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPAL--------------

Target QLQNALHDYAKQGATFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDHLDYHG-TLEAYAEAKARLFQFNSLKVAVINLD
1eeh.1.A -------MLLDDECELYVLELSSFQLE--TTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENA--KVCVVNAD

Target DAHADLMIKSAQNNPAQPKILTYSLTQDTADYYIADLSYSLAGATFNLVSQQGS--FAVESPLLGHFNVENLIAALIAAE
1eeh.1.A DALTMPIRG-AD-----ERCVSFGV-N-MGDYHLNHQQG--ETW-LRV--KGEKVLNVKEMKLSGQHNYTNALAALALAD

Target QAGFDLQALVNFVPKLIGAPGRMQVIRD-DERLFVVDY-AHTPDALIQVLKTLKRHVSNQLWAVFGCGGDRDRGKRPLMT
1eeh.1.A AAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLH-V-DGTLHLLLGGD-GKSADFSPLAR

Target QAALDGANPVILTSDNPRTEDPEQIFADMKQGIDFSGHRMHEIHDRREAIKFVAEQAQAGDIVVIAGKGHENYQEINGVR
1eeh.1.A YLN-GDNVRLYCFGRD-----GAQLAALRPE-------VAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQ------

Target HWFDDVVEVRSAIDAQHHTVDAAYPAQ
1eeh.1.A ---------------------------




Model #05

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER
None
0.44-6.91
QMEAN-6.91
-4.80
All Atom-3.66
Solvation-2.30
Torsion-5.69
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
4buc.1.A16.99monomerHHblitsX-ray2.17Å0.29 24 - 464 0.73UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
LigandAdded to ModelDescription
CL✕ - Not biologically relevant.
CHLORIDE ION
CL✕ - Not biologically relevant.
CHLORIDE ION
CL✕ - Not biologically relevant.
CHLORIDE ION
GOL✕ - Not biologically relevant.
GLYCEROL
GOL✕ - Not biologically relevant.
GLYCEROL
GOL✕ - Not biologically relevant.
GLYCEROL
NH4✕ - Not biologically relevant.
AMMONIUM ION
PO3✕ - Binding site not conserved.
PHOSPHITE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION
PO4✕ - Not biologically relevant.
PHOSPHATE ION

Target    MTVSFQEIHPIEIDAQWPQQPFHGFSLDSRKVETGQIFIALTSY---SQPEKTRTFAEAALANGALAVISETELGVANE-
4buc.1.A -----------------------KFFVSEAKTLDGET--KKFLEEHSVEYEEGGH--TEKL-LDCDVVYVSPGIKPDTSM

Target WVCPDVR--QRMGEWQKR-YLQQADVVKPLRVIAVTGTNGKTTISRLIAELISSQQQRCAVMGTTGNGILPHLTPSTHTT
4buc.1.A IELLSSRGVKLSTELQFFLDN---V--DPKKVVGITGTDGKSTATALMYHVLSGRGFKTFLGGNFGT-------PAV---

Target LDALQLQNALHDYAKQGATFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDHLDYHGTLEAYAEAKARL---FQFNSLKV
4buc.1.A ---------E-ALE-GEYDYYVLEMSSFQLF--WSERPYLSNFLVLNISEDHLDWHSSFKEYVDSKLKPAFLQTE--GDL

Target AVINLDDAHADLMIKSAQNNPAQPKILTYSLTQDTADYYIADLSYSLAGATFNLVSQQGSFAVESPLLGHFNVE---NLI
4buc.1.A FVYNKHIERLRNLEG-VR-----SRKIPFWT-D--ENF-A-----T-EK-ELIV--R----GKKYTLPGNYPYQMRENIL

Target AALIAAEQAGFDLQALVNFVPKLIGAPGRMQVIRD-DERLFVVDY-AHTPDALIQVLKTLKRHVSNQLWAVFGCGGDRDR
4buc.1.A AVSVLYMEMFNELESFLELLRDFKPLPHRMEYLGQIDGRHFYNDSKATSTHAVLGALSNFD-----KVVLIMCG-IGKKE

Target GKRPLMTQAALDGANPVILTSDNPRTEDPEQIFADMKQGIDFSGHRMHEIHDRREAIKFVAEQAQAGDIVVIAGKGHENY
4buc.1.A NYSLFVEKAS-PKLKHLIMFGEI-----SKELAPFVGK-I-----PHSIVENMEEAFEKAMEVSEKGDVILLSPGGASF-

Target QEINGVRHWFDDVVEVRSAIDAQHHTVDAAYPAQ
4buc.1.A ----------------------------------




Materials and Methods

Template Search

Template search with Blast and HHBlits has been performed against the SWISS-MODEL template library (SMTL, last update: 2017-10-11, last included PDB release: 2017-10-06).

The target sequence was searched with BLAST (Altschul et al., 1997) against the primary amino acid sequence contained in the SMTL. A total of 14 templates were found.

An initial HHblits profile has been built using the procedure outlined in (Remmert, et al., 2011), followed by 1 iteration of HHblits against NR20. The obtained profile has then be searched against all profiles of the SMTL. A total of 521 templates were found.

Template Selection

For each identified template, the template's quality has been predicted from features of the target-template alignment. The templates with the highest quality have then been selected for model building.

Model Building

Models are built based on the target-template alignment using ProMod3. Coordinates which are conserved between the target and the template are copied from the template to the model. Insertions and deletions are remodelled using a fragment library. Side chains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field. In case loop modelling with ProMod3 fails, an alternative model is built with PROMOD-II (Guex, et al., 1997).

Model Quality Estimation

The global and per-residue model quality has been assessed using the QMEAN scoring function (Benkert, et al., 2011) . For improved performance, weights of the individual QMEAN terms have been trained specifically for SWISS-MODEL.

Ligand Modelling

Ligands present in the template structure are transferred by homology to the model when the following criteria are met (Gallo -Casserino, to be published): (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contact with the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between the target and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The model summary includes information on why and which ligand has not been included.

Oligomeric State Conservation

Homo-oligomeric structure of the target protein is predicted based on the analysis of pairwise interfaces of the identified template structures. For each relevant interface between polypeptide chains (interfaces with more than 10 residue-residue interactions), the QscoreOligomer (Mariani et al., 2011) is predicted from features such as similarity to target and frequency of observing this interface in the identified templates (Kiefer, Bertoni, Biasini, to be published). The prediction is performed with a random forest regressor using these features as input parameters to predict the probability of conservation for each interface. The QscoreOligomer of the whole complex is then calculated as the weight-averaged QscoreOligomer of the interfaces. The oligomeric state of the target is predicted to be the same as in the template when QscoreOligomer is predicted to be higher or equal to 0.5.

References

Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25, 3389-3402.
Remmert, M., Biegert, A., Hauser, A. and Soding, J. (2012) HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nat Methods, 9, 173-175.
Guex, N. and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis, 18, 2714-2723.
Sali, A. and Blundell, T.L. (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol, 234, 779-815.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350.
Mariani, V., Kiefer, F., Schmidt, T., Haas, J. and Schwede, T. (2011) Assessment of template based protein structure predictions in CASP9. Proteins, 79 Suppl 10, 37-58.

Table T1:

Primary amino acid sequence for which templates were searched and models were built.

MTVSFQEIHPIEIDAQWPQQPFHGFSLDSRKVETGQIFIALTSYSQPEKTRTFAEAALANGALAVISETELGVANEWVCPDVRQRMGEWQKRYLQQADVV
KPLRVIAVTGTNGKTTISRLIAELISSQQQRCAVMGTTGNGILPHLTPSTHTTLDALQLQNALHDYAKQGATFASLEASSHGLEQGRLNGCDIEIAVYSN
LSRDHLDYHGTLEAYAEAKARLFQFNSLKVAVINLDDAHADLMIKSAQNNPAQPKILTYSLTQDTADYYIADLSYSLAGATFNLVSQQGSFAVESPLLGH
FNVENLIAALIAAEQAGFDLQALVNFVPKLIGAPGRMQVIRDDERLFVVDYAHTPDALIQVLKTLKRHVSNQLWAVFGCGGDRDRGKRPLMTQAALDGAN
PVILTSDNPRTEDPEQIFADMKQGIDFSGHRMHEIHDRREAIKFVAEQAQAGDIVVIAGKGHENYQEINGVRHWFDDVVEVRSAIDAQHHTVDAAYPAQ

Table T2:

TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityCoverageDescription
4bub.1.A34.96monomerHHblitsX-ray2.90Å0.360.95UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4bub.2.A34.96monomerHHblitsX-ray2.90Å0.360.95UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4c12.1.A31.01homo-dimerHHblitsX-ray1.80Å0.360.95UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
1e8c.1.A37.64monomerBLASTX-ray2.00Å0.380.92UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
1e8c.1.A36.98monomerHHblitsX-ray2.00Å0.380.92UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
4c12.1.A34.30homo-dimerBLASTX-ray1.80Å0.380.90UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
2xja.1.A35.23monomerHHblitsX-ray3.00Å0.360.92UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
2wtz.1.A35.23monomerHHblitsX-ray3.00Å0.360.92UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
4cvl.1.A23.46monomerHHblitsX-ray2.98Å0.300.85UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
4cvm.1.A23.46monomerHHblitsX-ray2.06Å0.300.85UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D- ALANINE LIGASE
1gg4.1.A23.44monomerHHblitsX-ray2.30Å0.310.84UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE
4qf5.1.A21.48monomerHHblitsX-ray2.80Å0.310.81UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4qdi.1.A21.48monomerHHblitsX-ray1.80Å0.310.81UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4ziy.1.A21.29monomerHHblitsX-ray1.85Å0.310.81UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
2am2.1.A21.78monomerHHblitsX-ray2.80Å0.300.81UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein
3zm5.1.A21.64monomerHHblitsX-ray2.94Å0.300.81UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
3zl8.1.A20.30monomerHHblitsX-ray1.65Å0.300.80UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
3lk7.1.A21.04monomerHHblitsX-ray1.50Å0.300.77UDP-N-acetylmuramoylalanine--D-glutamate ligase
2xja.1.A38.29monomerBLASTX-ray3.00Å0.370.70UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
2wtz.1.A38.29monomerBLASTX-ray3.00Å0.370.70UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
1uag.1.A20.26monomerHHblitsX-ray1.95Å0.300.76UDP-N-ACETYLMURAMOYL-L-ALANINE/:D-GLUTAMATE LIGASE
1eeh.1.A20.26monomerHHblitsX-ray1.90Å0.300.76UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
2uag.1.A20.26monomerHHblitsX-ray1.70Å0.300.76PROTEIN (UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE)
1e0d.1.A20.26monomerHHblitsX-ray2.40Å0.300.76UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5e.1.A20.26monomerHHblitsX-ray1.84Å0.300.76UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
4bub.1.A40.36monomerBLASTX-ray2.90Å0.400.68UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4bub.2.A40.36monomerBLASTX-ray2.90Å0.400.68UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
2xpc.1.A20.16monomerHHblitsX-ray1.49Å0.300.76UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
2y67.1.A20.16monomerHHblitsX-ray1.85Å0.300.76UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
3hn7.1.A20.63monomerHHblitsX-ray1.65Å0.300.76UDP-N-acetylmuramate-L-alanine ligase
5a5f.1.A20.27monomerHHblitsX-ray1.90Å0.300.75UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
2vor.1.A20.77monomerHHblitsX-ray2.30Å0.300.73FOLYLPOLYGLUTAMATE SYNTHASE PROTEIN FOLC
4buc.1.A16.99monomerHHblitsX-ray2.17Å0.290.73UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
4buc.2.A16.99monomerHHblitsX-ray2.17Å0.290.73UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
1p3d.1.A18.61monomerHHblitsX-ray1.70Å0.300.72UDP-N-acetylmuramate--alanine ligase
1gqq.1.A18.61homo-dimerHHblitsX-ray3.10Å0.300.72UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1gqq.1.B18.61homo-dimerHHblitsX-ray3.10Å0.300.72UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1p31.1.A18.61monomerHHblitsX-ray1.85Å0.300.72UDP-N-acetylmuramate--alanine ligase
1gqy.1.B18.61homo-dimerHHblitsX-ray1.80Å0.300.72UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1gqy.1.A18.61homo-dimerHHblitsX-ray1.80Å0.300.72UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
4hv4.1.A17.78monomerHHblitsX-ray2.25Å0.290.72UDP-N-acetylmuramate--L-alanine ligase
4hv4.2.A17.78monomerHHblitsX-ray2.25Å0.290.72UDP-N-acetylmuramate--L-alanine ligase
2f00.1.A17.27homo-dimerHHblitsX-ray2.50Å0.290.72UDP-N-acetylmuramate--L-alanine ligase
2gcb.1.A20.17monomerHHblitsX-ray2.30Å0.300.71Folylpolyglutamate synthase
1o5z.1.A17.90monomerHHblitsX-ray2.10Å0.290.71folylpolyglutamate synthase/dihydrofolate synthase
1j6u.1.A18.80monomerHHblitsX-ray2.30Å0.300.70UDP-N-acetylmuramate-alanine ligase MurC
2gca.1.A19.66monomerHHblitsX-ray2.40Å0.290.70Folylpolyglutamate synthase
2gc5.1.A19.66monomerHHblitsX-ray1.85Å0.290.70Folylpolyglutamate synthase
1fgs.1.A19.66monomerHHblitsX-ray2.40Å0.290.70FOLYLPOLYGLUTAMATE SYNTHETASE
1jbw.1.A19.66monomerHHblitsX-ray1.85Å0.290.70FOLYLPOLYGLUTAMATE SYNTHASE
1jbv.1.A19.66monomerHHblitsX-ray1.95Å0.290.70FOLYLPOLYGLUTAMATE SYNTHASE
2gc6.1.A19.66monomerHHblitsX-ray1.90Å0.290.70Folylpolyglutamate synthase
1w7k.1.A20.23monomerHHblitsX-ray2.10Å0.300.69FOLC BIFUNCTIONAL PROTEIN
1w78.1.A20.23monomerHHblitsX-ray1.82Å0.300.69FOLC BIFUNCTIONAL PROTEIN
4cvl.1.A30.75monomerBLASTX-ray2.98Å0.340.65UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
4cvm.1.A30.75monomerBLASTX-ray2.06Å0.340.65UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D- ALANINE LIGASE
3lk7.1.A28.39monomerBLASTX-ray1.50Å0.340.64UDP-N-acetylmuramoylalanine--D-glutamate ligase
3nrs.1.A19.46monomerHHblitsX-ray1.80Å0.300.67Dihydrofolate:folylpolyglutamate synthetase
3pyz.1.A19.46monomerHHblitsX-ray2.10Å0.300.67Bifunctional folylpolyglutamate synthase/dihydrofolate synthase
4qf5.1.A26.50monomerBLASTX-ray2.80Å0.330.64UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4qdi.1.A26.50monomerBLASTX-ray1.80Å0.330.64UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4ziy.1.A27.44monomerBLASTX-ray1.85Å0.330.64UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
1gg4.1.A29.26monomerBLASTX-ray2.30Å0.340.62UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE
3zl8.1.A31.16monomerBLASTX-ray1.65Å0.360.55UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
3eag.1.A18.52homo-dimerHHblitsX-ray2.55Å0.280.49UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
3eag.1.B18.52homo-dimerHHblitsX-ray2.55Å0.280.49UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
5vvw.1.A19.92homo-tetramerHHblitsX-ray2.30Å0.300.47UDP-N-acetylmuramate--L-alanine ligase
3mvn.1.A16.53monomerHHblitsX-ray1.90Å0.290.24UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-medo-diaminopimelate ligase
2obn.1.A12.71homo-dimerHHblitsX-ray2.30Å0.260.24Hypothetical protein
2obn.1.B12.71homo-dimerHHblitsX-ray2.30Å0.260.24Hypothetical protein
2g0t.1.A16.49homo-dimerHHblitsX-ray2.67Å0.280.19conserved hypothetical protein
1kzh.1.A12.37homo-dimerHHblitsX-ray2.55Å0.270.19phosphofructokinase
1kzh.1.B12.37homo-dimerHHblitsX-ray2.55Å0.270.19phosphofructokinase
2f48.1.B12.37homo-dimerHHblitsX-ray2.11Å0.270.19diphosphate--fructose-6-phosphate 1-phosphotransferase
2j37.1.G15.58hetero-oligomerHHblitsEM8.00Å0.290.15SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN (SRP54)
4ue5.1.D15.58hetero-oligomerHHblitsEM9.00Å0.290.15SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN
5l3q.1.A15.58hetero-oligomerHHblitsX-ray3.20Å0.290.15Signal recognition particle 54 kDa protein
3dm5.1.A14.29homo-tetramerHHblitsX-ray2.51Å0.290.15Signal recognition 54 kDa protein
3jaj.45.A15.79monomerHHblitsEMNA0.300.15SRP54
3jan.45.A15.79monomerHHblitsEMNA0.300.15SRP54
3kl4.1.A10.39hetero-oligomerHHblitsX-ray3.50Å0.280.15Signal recognition 54 kDa protein
1qzw.1.B10.39monomerHHblitsX-ray4.10Å0.270.15Signal recognition 54 kDa protein
1qzx.1.A10.39monomerHHblitsX-ray4.00Å0.270.15Signal recognition 54 kDa protein
2ffh.1.A10.53monomerHHblitsX-ray3.20Å0.270.15PROTEIN (FFH)
5xvk.1.A16.95monomerHHblitsX-ray1.88Å0.290.12Nicotinamide N-methyltransferase
5xvk.2.A16.95monomerHHblitsX-ray1.88Å0.290.12Nicotinamide N-methyltransferase
2i62.1.A16.95monomerHHblitsX-ray1.80Å0.290.12Nicotinamide N-methyltransferase
2i62.3.A16.95monomerHHblitsX-ray1.80Å0.290.12Nicotinamide N-methyltransferase
2onz.1.A17.54monomerHHblitsX-ray2.80Å0.280.11Phenylethanolamine N-methyltransferase
3hce.1.A17.54monomerHHblitsX-ray2.85Å0.280.11Phenylethanolamine N-methyltransferase
3rod.1.A15.79monomerHHblitsX-ray2.72Å0.280.11Nicotinamide N-methyltransferase
3rod.3.A15.79monomerHHblitsX-ray2.72Å0.280.11Nicotinamide N-methyltransferase
3hca.1.A17.86monomerHHblitsX-ray2.40Å0.280.11Phenylethanolamine N-methyltransferase
3hcb.1.A17.86monomerHHblitsX-ray2.40Å0.280.11Phenylethanolamine N-methyltransferase
1hnn.1.A18.18monomerHHblitsX-ray2.40Å0.290.11PHENYLETHANOLAMINE N-METHYLTRANSFERASE
2a14.1.A14.04monomerHHblitsX-ray1.70Å0.250.11indolethylamine N-methyltransferase
1rz3.1.A23.08monomerHHblitsX-ray1.90Å0.310.10hypothetical protein RBSTP0775
3cio.1.A17.31homo-dimerHHblitsX-ray2.50Å0.310.10Tyrosine-protein kinase etk
3cio.1.B17.31homo-dimerHHblitsX-ray2.50Å0.310.10Tyrosine-protein kinase etk
3bfv.1.A13.46monomerHHblitsX-ray1.80Å0.290.10Membrane protein CapA1, Protein tyrosine kinase
4jmp.1.A13.46monomerHHblitsX-ray1.30Å0.290.10C-terminal fragment of CapA, Protein tyrosine kinase
4jlv.1.A13.46monomerHHblitsX-ray2.20Å0.290.10C-terminal fragment of Membrane protein CapA1, Putative uncharacterized protein capB1
2ved.1.A11.54homo-octamerHHblitsX-ray2.60Å0.280.10MEMBRANE PROTEIN CAPA1, PROTEIN TYROSINE KINASE
3upu.1.A18.75monomerHHblitsX-ray3.30Å0.300.10ATP-dependent DNA helicase dda
3upu.3.A18.75monomerHHblitsX-ray3.30Å0.300.10ATP-dependent DNA helicase dda
2p5t.2.C20.93hetero-oligomerHHblitsX-ray3.20Å0.300.09PezT
2p5t.1.D20.93hetero-oligomerHHblitsX-ray3.20Å0.300.09PezT
2p5t.1.B20.93hetero-oligomerHHblitsX-ray3.20Å0.300.09PezT
2p5t.2.E20.93hetero-oligomerHHblitsX-ray3.20Å0.300.09PezT
1xjc.1.A23.68monomerHHblitsX-ray2.10Å0.310.08MobB protein homolog
1sq5.1.A25.00homo-dimerHHblitsX-ray2.20Å0.340.07Pantothenate kinase
2v3c.1.B27.78hetero-oligomerHHblitsX-ray2.50Å0.340.07SIGNAL RECOGNITION 54 KDA PROTEIN
2v3c.2.B27.78hetero-oligomerHHblitsX-ray2.50Å0.340.07SIGNAL RECOGNITION 54 KDA PROTEIN
4f7w.1.B25.00homo-dimerHHblitsX-ray2.10Å0.340.07Pantothenate kinase
4f7w.1.A25.00homo-dimerHHblitsX-ray2.10Å0.340.07Pantothenate kinase
4f7w.3.A25.00homo-dimerHHblitsX-ray2.10Å0.340.07Pantothenate kinase
4f7w.4.B25.00homo-dimerHHblitsX-ray2.10Å0.340.07Pantothenate kinase
4ne2.2.A25.00homo-dimerHHblitsX-ray1.90Å0.340.07Pantothenate kinase
4oyh.1.A30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.2.A30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.2.B30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.3.A30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.3.B30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.1.A30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.2.A30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.2.B30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.3.A30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.3.B30.56homo-dimerHHblitsX-ray2.41Å0.340.07Molybdopterin-guanine dinucleotide biosynthesis protein B
1np6.1.A18.92homo-dimerHHblitsX-ray1.90Å0.310.07Molybdopterin-guanine dinucleotide biosynthesis protein B
1np6.1.B18.92homo-dimerHHblitsX-ray1.90Å0.310.07Molybdopterin-guanine dinucleotide biosynthesis protein B
4pfs.1.A24.32monomerHHblitsX-ray2.30Å0.310.07Cobyrinic Acid a,c-diamide synthase
4pfs.2.A24.32monomerHHblitsX-ray2.30Å0.310.07Cobyrinic Acid a,c-diamide synthase
5j1j.1.A38.24homo-dimerHHblitsX-ray1.55Å0.380.07Site-determining protein
5j1j.1.B38.24homo-dimerHHblitsX-ray1.55Å0.380.07Site-determining protein
5jvf.1.A38.24monomerHHblitsX-ray1.66Å0.380.07Site-determining protein
2og2.1.A25.00monomerHHblitsX-ray2.00Å0.330.07Putative signal recognition particle receptor
5l3w.1.A22.22monomerHHblitsX-ray2.40Å0.320.07Signal recognition particle receptor FtsY
5l3s.1.B22.22hetero-oligomerHHblitsX-ray1.90Å0.320.07Signal recognition particle receptor FtsY
5l3s.2.B22.22hetero-oligomerHHblitsX-ray1.90Å0.320.07Signal recognition particle receptor FtsY
5l3s.3.B22.22hetero-oligomerHHblitsX-ray1.90Å0.320.07Signal recognition particle receptor FtsY
5l3s.4.B22.22hetero-oligomerHHblitsX-ray1.90Å0.320.07Signal recognition particle receptor FtsY
5l3r.1.A28.57hetero-oligomerHHblitsX-ray2.50Å0.340.07Signal recognition particle 54 kDa protein, chloroplastic
3ndb.1.B28.57hetero-oligomerHHblitsX-ray3.00Å0.340.07Signal recognition 54 kDa protein
3md0.1.A22.22homo-dimerHHblitsX-ray2.45Å0.320.07Arginine/ornithine transport system ATPase
1vma.1.A28.57monomerHHblitsX-ray1.60Å0.340.07cell division protein FtsY
2gks.1.A20.00homo-dimerHHblitsX-ray2.31Å0.340.07Bifunctional SAT/APS kinase
2gks.1.B20.00homo-dimerHHblitsX-ray2.31Å0.340.07Bifunctional SAT/APS kinase
3syn.2.A25.71hetero-oligomerHHblitsX-ray3.06Å0.340.07Flagellar biosynthesis protein flhF
2px0.1.B25.71homo-dimerHHblitsX-ray3.00Å0.340.07Flagellar biosynthesis protein flhF
2px0.3.B25.71homo-dimerHHblitsX-ray3.00Å0.340.07Flagellar biosynthesis protein flhF
2px0.4.A25.71homo-dimerHHblitsX-ray3.00Å0.340.07Flagellar biosynthesis protein flhF
2px3.1.A25.71homo-dimerHHblitsX-ray3.20Å0.340.07Flagellar biosynthesis protein flhF
2px0.1.A25.71homo-dimerHHblitsX-ray3.00Å0.340.07Flagellar biosynthesis protein flhF
5l3r.1.B25.71hetero-oligomerHHblitsX-ray2.50Å0.330.07Cell division protein FtsY homolog, chloroplastic
3b9q.1.A25.71monomerHHblitsX-ray1.75Å0.330.07Chloroplast SRP receptor homolog, alpha subunit CPFTSY
5if9.1.A25.00monomerHHblitsX-ray1.80Å0.310.07Cobyrinic Acid a,c-diamide synthase
1p9n.1.A19.44homo-dimerHHblitsX-ray2.80Å0.310.07Molybdopterin-guanine dinucleotide biosynthesis protein B
1p9n.1.B19.44homo-dimerHHblitsX-ray2.80Å0.310.07Molybdopterin-guanine dinucleotide biosynthesis protein B
3c8u.1.A29.41monomerHHblitsX-ray1.95Å0.350.07Fructokinase
1j8m.1.A25.71monomerHHblitsX-ray2.00Å0.330.07SIGNAL RECOGNITION 54 KDA PROTEIN
2p67.1.A28.57homo-dimerHHblitsX-ray1.80Å0.330.07LAO/AO transport system kinase
3tk1.1.A25.71homo-dimerHHblitsX-ray2.40Å0.330.07Membrane ATPase/protein kinase
1zu5.1.A22.86monomerHHblitsX-ray2.40Å0.330.07ftsY
1zu4.1.A22.86monomerHHblitsX-ray1.95Å0.330.07ftsY
1fts.1.A28.57monomerHHblitsX-ray2.20Å0.330.07FTSY
5gad.1.928.57hetero-oligomerHHblitsEMNA0.330.07Signal recognition particle receptor FtsY
2xxa.1.B28.57hetero-oligomerHHblitsX-ray3.94Å0.330.07SRP RECEPTOR FTSY
5nco.1.c28.57hetero-oligomerHHblitsEM4.80Å0.330.07Signal recognition particle receptor FtsY
2qy9.1.A28.57monomerHHblitsX-ray1.90Å0.330.07Cell division protein ftsY
5aun.1.B26.47hetero-oligomerHHblitsX-ray1.63Å0.350.07ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.A26.47homo-dimerHHblitsX-ray2.10Å0.350.07ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
5auq.3.A26.47homo-dimerHHblitsX-ray2.53Å0.350.07ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.B26.47homo-dimerHHblitsX-ray2.10Å0.350.07ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
4c7o.1.A20.00hetero-oligomerHHblitsX-ray2.60Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
4c7o.2.A20.00hetero-oligomerHHblitsX-ray2.60Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
5nco.1.920.00hetero-oligomerHHblitsEM4.80Å0.320.07Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein
5gad.1.720.00hetero-oligomerHHblitsEMNA0.320.07Signal recognition particle protein Ffh
2xxa.1.A20.00hetero-oligomerHHblitsX-ray3.94Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
2xxa.2.A20.00hetero-oligomerHHblitsX-ray3.94Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
2j28.1.H20.00hetero-oligomerHHblitsEM8.00Å0.320.07SIGNAL RECOGNITION PARTICLE 54
5gaf.1.720.00hetero-oligomerHHblitsEMNA0.320.07Signal recognition particle protein
3adb.1.A33.33homo-dimerHHblitsX-ray2.80Å0.370.07L-seryl-tRNA(Sec) kinase
3adc.1.B33.33homo-dimerHHblitsX-ray2.90Å0.370.07L-seryl-tRNA(Sec) kinase
3adc.1.A33.33homo-dimerHHblitsX-ray2.90Å0.370.07L-seryl-tRNA(Sec) kinase
3adb.1.B33.33homo-dimerHHblitsX-ray2.80Å0.370.07L-seryl-tRNA(Sec) kinase
3add.1.B33.33homo-dimerHHblitsX-ray2.40Å0.370.07L-seryl-tRNA(Sec) kinase
3nxs.1.A22.86homo-dimerHHblitsX-ray2.30Å0.320.07LAO/AO transport system ATPase
3dm9.1.A25.71homo-hexamerHHblitsX-ray2.20Å0.320.07Signal recognition particle receptor
3e70.1.A25.71monomerHHblitsX-ray1.97Å0.320.07Signal recognition particle receptor
3dmd.1.F25.71homo-hexamerHHblitsX-ray2.21Å0.320.07Signal recognition particle receptor
3dmd.1.E25.71homo-hexamerHHblitsX-ray2.21Å0.320.07Signal recognition particle receptor
3fmi.1.A29.41homo-dimerHHblitsX-ray2.18Å0.340.07Dethiobiotin synthetase
3fmi.1.B29.41homo-dimerHHblitsX-ray2.18Å0.340.07Dethiobiotin synthetase
3fmf.2.A29.41homo-dimerHHblitsX-ray2.05Å0.340.07Dethiobiotin synthetase
5l3s.1.A20.00hetero-oligomerHHblitsX-ray1.90Å0.320.07Signal recognition particle 54 kDa protein
5l3s.4.A20.00hetero-oligomerHHblitsX-ray1.90Å0.320.07Signal recognition particle 54 kDa protein
5l3v.1.A20.00monomerHHblitsX-ray2.30Å0.320.07Signal recognition particle 54 kDa protein
5l3v.2.A20.00monomerHHblitsX-ray2.30Å0.320.07Signal recognition particle 54 kDa protein
2cnw.1.B22.86hetero-oligomerHHblitsX-ray2.39Å0.320.07CELL DIVISION PROTEIN FTSY
2iyl.1.A22.86monomerHHblitsX-ray2.10Å0.320.07CELL DIVISION PROTEIN FTSY
2cnw.2.B22.86hetero-oligomerHHblitsX-ray2.39Å0.320.07CELL DIVISION PROTEIN FTSY
4rz2.1.A28.57monomerHHblitsX-ray2.80Å0.320.07Site-determining protein
1xnj.1.B26.47homo-dimerHHblitsX-ray1.98Å0.340.07Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1
1xnj.1.A26.47homo-dimerHHblitsX-ray1.98Å0.340.07Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1
3of5.1.A26.47homo-dimerHHblitsX-ray1.52Å0.340.07Dethiobiotin synthetase
3la6.1.F26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.1.B26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.1.C26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.1.D26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.1.E26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.1.A26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.1.G26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.1.H26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
3la6.2.C26.47homo-octamerHHblitsX-ray3.20Å0.340.07Tyrosine-protein kinase wzc
2bek.1.A29.41homo-dimerHHblitsX-ray1.80Å0.340.07SEGREGATION PROTEIN
1wcv.1.A29.41homo-dimerHHblitsX-ray1.60Å0.340.07SEGREGATION PROTEIN
2bej.1.A29.41homo-dimerHHblitsX-ray2.10Å0.340.07SEGREGATION PROTEIN
3ez7.1.A22.86homo-dimerHHblitsX-ray2.92Å0.310.07Plasmid partition protein A
4rz3.1.A32.35homo-dimerHHblitsX-ray1.90Å0.330.07Site-determining protein
4rz3.1.B32.35homo-dimerHHblitsX-ray1.90Å0.330.07Site-determining protein
2yhs.1.A29.41monomerHHblitsX-ray1.60Å0.330.07CELL DIVISION PROTEIN FTSY
2xit.1.A32.35homo-dimerHHblitsX-ray1.80Å0.330.07MIPZ
2xj9.1.A32.35homo-dimerHHblitsX-ray2.80Å0.330.07MIPZ
2xj9.1.B32.35homo-dimerHHblitsX-ray2.80Å0.330.07MIPZ
4ak9.1.A23.53homo-dimerHHblitsX-ray1.80Å0.330.07CPFTSY
3zq6.1.A29.41homo-dimerHHblitsX-ray2.11Å0.330.07PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.1.B29.41homo-dimerHHblitsX-ray2.11Å0.330.07PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.2.A29.41homo-dimerHHblitsX-ray2.11Å0.330.07PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.2.B29.41homo-dimerHHblitsX-ray2.11Å0.330.07PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
4c7o.1.B25.71hetero-oligomerHHblitsX-ray2.60Å0.310.07SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY
1g3r.1.A21.21monomerHHblitsX-ray2.70Å0.350.07CELL DIVISION INHIBITOR
1j8y.1.A23.53monomerHHblitsX-ray2.00Å0.330.07SIGNAL RECOGNITION 54 KDA PROTEIN
1ion.1.A21.21monomerHHblitsX-ray2.30Å0.350.07PROBABLE CELL DIVISION INHIBITOR MIND
1m8p.1.A23.53homo-hexamerHHblitsX-ray2.60Å0.330.07sulfate adenylyltransferase
1i2d.1.A23.53homo-hexamerHHblitsX-ray2.81Å0.330.07ATP SULFURYLASE
5u1g.1.A36.36hetero-oligomerHHblitsX-ray3.64Å0.350.07ParA
5u1g.2.B36.36hetero-oligomerHHblitsX-ray3.64Å0.350.07ParA
4e07.1.A36.36monomerHHblitsX-ray2.90Å0.350.07Plasmid partitioning protein ParF
4e09.1.A36.36homo-dimerHHblitsX-ray2.99Å0.350.07Plasmid partitioning protein ParF
4e03.1.A36.36monomerHHblitsX-ray2.45Å0.350.07Plasmid partitioning protein ParF
4e03.2.A36.36monomerHHblitsX-ray2.45Å0.350.07Plasmid partitioning protein ParF
4dzz.1.A36.36monomerHHblitsX-ray1.80Å0.350.07Plasmid partitioning protein ParF
4dzz.2.A36.36monomerHHblitsX-ray1.80Å0.350.07Plasmid partitioning protein ParF
2j7p.1.B23.53hetero-oligomerHHblitsX-ray1.97Å0.330.07CELL DIVISION PROTEIN FTSY
1okk.1.B23.53hetero-oligomerHHblitsX-ray2.05Å0.330.07CELL DIVISION PROTEIN FTSY
2xkv.1.D23.53hetero-oligomerHHblitsEM13.50Å0.330.07CELL DIVISION PROTEIN FTSY
4v02.1.A27.27hetero-oligomerHHblitsX-ray2.70Å0.350.07SITE-DETERMINING PROTEIN
5u1j.1.A27.27homo-dimerHHblitsX-ray2.95Å0.350.07Uncharacterized protein
5u1j.1.B27.27homo-dimerHHblitsX-ray2.95Å0.350.07Uncharacterized protein
5u1j.2.A27.27homo-dimerHHblitsX-ray2.95Å0.350.07Uncharacterized protein
5u1j.2.B27.27homo-dimerHHblitsX-ray2.95Å0.350.07Uncharacterized protein
2www.1.A14.71homo-dimerHHblitsX-ray2.64Å0.320.07METHYLMALONIC ACIDURIA TYPE A PROTEIN, MITOCHONDRIAL
3kb1.1.A26.47homo-dimerHHblitsX-ray2.90Å0.320.07Nucleotide-binding protein
1a7j.1.A17.65monomerHHblitsX-ray2.50Å0.320.07PHOSPHORIBULOKINASE
2f1r.1.A28.13homo-dimerHHblitsX-ray2.10Å0.370.06molybdopterin-guanine dinucleotide biosynthesis protein B (mobB)
2f1r.1.B28.13homo-dimerHHblitsX-ray2.10Å0.370.06molybdopterin-guanine dinucleotide biosynthesis protein B (mobB)
3r9i.1.B37.50hetero-oligomerHHblitsX-ray2.60Å0.370.06Septum site-determining protein minD
3q9l.1.A37.50homo-dimerHHblitsX-ray2.34Å0.370.06Septum site-determining protein minD
3ua2.1.A24.24homo-hexamerHHblitsX-ray3.30Å0.340.07Circadian clock protein kinase kaiC
3ua2.1.B24.24homo-hexamerHHblitsX-ray3.30Å0.340.07Circadian clock protein kinase kaiC
3ua2.1.C24.24homo-hexamerHHblitsX-ray3.30Å0.340.07Circadian clock protein kinase kaiC
3ua2.1.D24.24homo-hexamerHHblitsX-ray3.30Å0.340.07Circadian clock protein kinase kaiC
3ua2.1.E24.24homo-hexamerHHblitsX-ray3.30Å0.340.07Circadian clock protein kinase kaiC
3ua2.1.F24.24homo-hexamerHHblitsX-ray3.30Å0.340.07Circadian clock protein kinase kaiC
4ijm.1.A24.24homo-hexamerHHblitsX-ray3.35Å0.340.07Circadian clock protein kinase KaiC
4ijm.1.C24.24homo-hexamerHHblitsX-ray3.35Å0.340.07Circadian clock protein kinase KaiC
4ijm.1.F24.24homo-hexamerHHblitsX-ray3.35Å0.340.07Circadian clock protein kinase KaiC
2xx3.1.A27.27homo-dimerHHblitsX-ray2.00Å0.340.07THYMIDYLATE KINASE
1e9f.1.A27.27homo-dimerHHblitsX-ray1.90Å0.340.07THYMIDYLATE KINASE
2ynm.1.A33.33hetero-oligomerHHblitsX-ray2.10Å0.340.07LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN
4wop.1.A30.30homo-dimerHHblitsX-ray2.39Å0.340.07ATP-dependent dethiobiotin synthetase BioD
2j7p.1.A20.59hetero-oligomerHHblitsX-ray1.97Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
3ng1.1.A20.59monomerHHblitsX-ray2.30Å0.320.07SIGNAL SEQUENCE RECOGNITION PROTEIN FFH
2cnw.1.A20.59hetero-oligomerHHblitsX-ray2.39Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
2cnw.3.A20.59hetero-oligomerHHblitsX-ray2.39Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
2xkv.1.A20.59hetero-oligomerHHblitsEM13.50Å0.320.07SIGNAL RECOGNITION PARTICLE PROTEIN
1ffh.1.A20.59monomerHHblitsX-ray2.05Å0.320.07FFH
3do6.1.A26.47homo-tetramerHHblitsX-ray1.85Å0.320.07Formate--tetrahydrofolate ligase
1fp7.1.A30.30homo-tetramerHHblitsX-ray3.20Å0.340.07FORMATE--TETRAHYDROFOLATE LIGASE
3qus.1.A30.30homo-dimerHHblitsX-ray2.84Å0.340.07Formate--tetrahydrofolate ligase
2xj4.1.A33.33monomerHHblitsX-ray1.60Å0.340.07MIPZ
2c03.1.A20.59monomerHHblitsX-ray1.24Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
2c03.2.A20.59monomerHHblitsX-ray1.24Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
1rj9.1.B20.59hetero-oligomerHHblitsX-ray1.90Å0.310.07Signal recognition particle protein
2j45.1.A20.59monomerHHblitsX-ray1.14Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
2j45.2.A20.59monomerHHblitsX-ray1.14Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
2j46.1.A20.59monomerHHblitsX-ray1.14Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
2j46.2.A20.59monomerHHblitsX-ray1.14Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
1o87.1.A20.59monomerHHblitsX-ray2.10Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
1o87.2.A20.59monomerHHblitsX-ray2.10Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
2c04.1.A20.59monomerHHblitsX-ray1.15Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
2c04.2.A20.59monomerHHblitsX-ray1.15Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
2ng1.1.A20.59monomerHHblitsX-ray2.02Å0.310.07SIGNAL SEQUENCE RECOGNITION PROTEIN FFH
1jpj.1.A20.59monomerHHblitsX-ray2.30Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
1jpn.1.A20.59monomerHHblitsX-ray1.90Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
1jpn.2.A20.59monomerHHblitsX-ray1.90Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
1ls1.1.A20.59monomerHHblitsX-ray1.10Å0.310.07SIGNAL RECOGNITION PARTICLE PROTEIN
3a4l.1.A31.25homo-dimerHHblitsX-ray1.80Å0.360.06L-seryl-tRNA(Sec) kinase
3a4l.1.B31.25homo-dimerHHblitsX-ray1.80Å0.360.06L-seryl-tRNA(Sec) kinase
3am1.1.C31.25homo-dimerHHblitsX-ray2.40Å0.360.06L-seryl-tRNA(Sec) kinase
3fkq.1.A14.29homo-dimerHHblitsX-ray2.10Å0.290.07NtrC-like two-domain protein
4v03.1.A24.24homo-dimerHHblitsX-ray1.90Å0.340.07SITE-DETERMINING PROTEIN
4ohv.1.A23.53monomerHHblitsX-ray2.30Å0.310.07Protein clpf-1
2ofw.1.B31.25homo-dimerHHblitsX-ray2.05Å0.360.06APS kinase domain of the PAPS synthetase 1
2ofw.1.A31.25homo-dimerHHblitsX-ray2.05Å0.360.06APS kinase domain of the PAPS synthetase 1
3pg5.1.A34.38monomerHHblitsX-ray3.30Å0.360.06Uncharacterized protein
3pg5.2.A34.38monomerHHblitsX-ray3.30Å0.360.06Uncharacterized protein
3pg5.3.A34.38monomerHHblitsX-ray3.30Å0.360.06Uncharacterized protein
3pg5.4.A34.38monomerHHblitsX-ray3.30Å0.360.06Uncharacterized protein
5k5z.1.A31.25homo-dimerHHblitsX-ray2.37Å0.360.06ParA
5k5z.2.A31.25homo-dimerHHblitsX-ray2.37Å0.360.06ParA
5k5z.2.B31.25homo-dimerHHblitsX-ray2.37Å0.360.06ParA
1rw4.1.A18.18homo-dimerHHblitsX-ray2.50Å0.330.07Nitrogenase iron protein 1
3ez9.1.A26.47homo-dimerHHblitsX-ray2.80Å0.310.07ParA
3ez9.2.A26.47homo-dimerHHblitsX-ray2.80Å0.310.07ParA
3ezf.1.A26.47homo-dimerHHblitsX-ray2.80Å0.310.07ParA
1hyq.1.A24.24monomerHHblitsX-ray2.60Å0.330.07CELL DIVISION INHIBITOR (MIND-1)
1rj9.1.A24.24hetero-oligomerHHblitsX-ray1.90Å0.330.07Signal Recognition Protein
2q9a.1.A24.24monomerHHblitsX-ray2.24Å0.330.07Cell division protein ftsY
2q9a.2.A24.24monomerHHblitsX-ray2.24Å0.330.07Cell division protein ftsY
2ph1.1.A31.25homo-dimerHHblitsX-ray2.70Å0.350.06Nucleotide-binding protein
1e98.1.A28.13homo-dimerHHblitsX-ray1.90Å0.350.06THYMIDYLATE KINASE
1nmy.1.A28.13monomerHHblitsX-ray1.60Å0.350.06similar to THYMIDYLATE KINASE (DTMP KINASE)
1e2e.1.A28.13homo-dimerHHblitsX-ray2.00Å0.350.06THYMIDYLATE KINASE
1e9c.1.A28.13homo-dimerHHblitsX-ray1.60Å0.350.06THYMIDYLATE KINASE
2ax4.1.A34.38homo-dimerHHblitsX-ray2.50Å0.350.06Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 2
5cb6.3.B31.25homo-dimerHHblitsX-ray2.79Å0.350.06Probable adenylyl-sulfate kinase
5cb6.2.B31.25homo-dimerHHblitsX-ray2.79Å0.350.06Probable adenylyl-sulfate kinase
1dts.1.A30.30homo-dimerHHblitsX-ray1.65Å0.320.07DETHIOBIOTIN SYNTHETASE
1dah.1.A30.30homo-dimerHHblitsX-ray1.64Å0.320.07DETHIOBIOTIN SYNTHETASE
1byi.1.A30.30homo-dimerHHblitsX-ray0.97Å0.320.07DETHIOBIOTIN SYNTHASE
5l3q.1.B17.14hetero-oligomerHHblitsX-ray3.20Å0.280.07Signal recognition particle receptor subunit alpha
3ug7.1.A17.65homo-tetramerHHblitsX-ray2.90Å0.300.07arsenical pump-driving ATPase
3ug6.1.A17.65homo-tetramerHHblitsX-ray3.30Å0.300.07arsenical pump-driving ATPase
4jim.1.A27.27homo-dimerHHblitsX-ray2.10Å0.320.07Formate--tetrahydrofolate ligase
4jjz.1.A27.27homo-dimerHHblitsX-ray2.50Å0.320.07Formate--tetrahydrofolate ligase
1eg7.1.A27.27homo-tetramerHHblitsX-ray2.50Å0.320.07FORMYLTETRAHYDROFOLATE SYNTHETASE
1f48.1.A27.27monomerHHblitsX-ray2.30Å0.320.07ARSENITE-TRANSLOCATING ATPASE
4bzq.1.A18.75homo-dimerHHblitsX-ray2.10Å0.340.06BIFUNCTIONAL ENZYME CYSN/CYSC
3jc8.36.A21.21monomerHHblitsEMNA0.310.07Type IV-A pilus assembly ATPase PilB
3jc8.37.A21.21monomerHHblitsEMNA0.310.07Type IV-A pilus assembly ATPase PilB
3ea0.1.A17.65homo-dimerHHblitsX-ray2.20Å0.290.07ATPase, ParA family
3ea0.1.B17.65homo-dimerHHblitsX-ray2.20Å0.290.07ATPase, ParA family
2yof.1.A21.21monomerHHblitsX-ray1.82Å0.310.07THYMIDYLATE KINASE
2yof.3.A21.21monomerHHblitsX-ray1.82Å0.310.07THYMIDYLATE KINASE
2yog.1.A21.21monomerHHblitsX-ray1.50Å0.310.07THYMIDYLATE KINASE
2yog.2.A21.21monomerHHblitsX-ray1.50Å0.310.07THYMIDYLATE KINASE
5a4j.1.A21.88homo-dimerHHblitsX-ray2.15Å0.330.06FORMATE--TETRAHYDROFOLATE LIGASE
3fwy.1.A31.25homo-dimerHHblitsX-ray1.63Å0.330.06Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
3fwy.1.B31.25homo-dimerHHblitsX-ray1.63Å0.330.06Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
3mle.1.A25.81homo-dimerHHblitsX-ray2.80Å0.350.06Dethiobiotin synthetase
1g20.1.E18.75hetero-oligomerHHblitsX-ray2.20Å0.330.06NITROGENASE IRON PROTEIN
1g21.1.H18.75hetero-oligomerHHblitsX-ray3.00Å0.330.06NITROGENASE IRON PROTEIN
1g21.1.E18.75hetero-oligomerHHblitsX-ray3.00Å0.330.06NITROGENASE IRON PROTEIN
4wzb.1.F18.75hetero-oligomerHHblitsX-ray2.30Å0.330.06Nitrogenase iron protein 1
4wzb.1.E18.75hetero-oligomerHHblitsX-ray2.30Å0.330.06Nitrogenase iron protein 1
1mrn.1.A21.88homo-dimerHHblitsX-ray2.45Å0.330.06Thymidylate Kinase
1w2h.1.A21.88homo-dimerHHblitsX-ray2.00Å0.330.06THYMIDYLATE KINASE TMK
2pey.1.A29.03homo-dimerHHblitsX-ray1.88Å0.350.06Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1 (PAPS synthetase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1)
2pey.1.B29.03homo-dimerHHblitsX-ray1.88Å0.350.06Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1 (PAPS synthetase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1)
2oze.1.A21.88homo-dimerHHblitsX-ray1.83Å0.330.06Orf delta'
3ibg.1.A25.00homo-dimerHHblitsX-ray3.20Å0.320.06ATPase, subunit of the Get complex
4d2i.1.A25.81homo-hexamerHHblitsX-ray2.84Å0.350.06HERA
4d2i.1.B25.81homo-hexamerHHblitsX-ray2.84Å0.350.06HERA
2w58.1.A18.75homo-dimerHHblitsX-ray2.50Å0.320.06PRIMOSOME COMPONENT (HELICASE LOADER)
2w58.1.B18.75homo-dimerHHblitsX-ray2.50Å0.320.06PRIMOSOME COMPONENT (HELICASE LOADER)
5it5.1.A18.75homo-hexamerHHblitsX-ray2.65Å0.320.06ATP binding motif-containing protein PilF
5it5.1.B18.75homo-hexamerHHblitsX-ray2.65Å0.320.06ATP binding motif-containing protein PilF
5it5.1.C18.75homo-hexamerHHblitsX-ray2.65Å0.320.06ATP binding motif-containing protein PilF
5it5.1.D18.75homo-hexamerHHblitsX-ray2.65Å0.320.06ATP binding motif-containing protein PilF
5it5.1.E18.75homo-hexamerHHblitsX-ray2.65Å0.320.06ATP binding motif-containing protein PilF
5it5.1.F18.75homo-hexamerHHblitsX-ray2.65Å0.320.06ATP binding motif-containing protein PilF
3n2i.1.A18.75homo-dimerHHblitsX-ray2.25Å0.320.06Thymidylate kinase
2wwg.2.B21.88homo-dimerHHblitsX-ray2.40Å0.310.06THYMIDILATE KINASE, PUTATIVE
2wwg.2.A21.88homo-dimerHHblitsX-ray2.40Å0.310.06THYMIDILATE KINASE, PUTATIVE
2woo.1.A25.00homo-dimerHHblitsX-ray3.01Å0.310.06ATPASE GET3
3ld9.1.A36.67homo-tetramerHHblitsX-ray2.15Å0.360.06Thymidylate kinase
4unq.1.A22.58monomerHHblitsX-ray2.30Å0.330.06THYMIDYLATE KINASE
4unq.2.A22.58monomerHHblitsX-ray2.30Å0.330.06THYMIDYLATE KINASE
4unp.1.A22.58monomerHHblitsX-ray2.30Å0.330.06THYMIDYLATE KINASE
4unn.1.A22.58monomerHHblitsX-ray2.50Å0.330.06THYMIDYLATE KINASE
2qmo.1.A26.67homo-dimerHHblitsX-ray1.47Å0.360.06Dethiobiotin synthetase
4gmd.1.B18.75homo-dimerHHblitsX-ray1.98Å0.300.06Thymidylate kinase
4gmd.1.A18.75homo-dimerHHblitsX-ray1.98Å0.300.06Thymidylate kinase
4edh.1.A18.75homo-dimerHHblitsX-ray1.32Å0.300.06Thymidylate kinase
4e5u.1.A18.75homo-dimerHHblitsX-ray1.81Å0.300.06Thymidylate kinase
4e5u.1.B18.75homo-dimerHHblitsX-ray1.81Å0.300.06Thymidylate kinase
3uxm.1.A18.75monomerHHblitsX-ray1.95Å0.300.06Thymidylate kinase
3uxm.2.A18.75monomerHHblitsX-ray1.95Å0.300.06Thymidylate kinase
5xb5.1.A26.67homo-dimerHHblitsX-ray2.23Å0.350.06Thymidylate kinase
5tsg.1.A18.75homo-hexamerHHblitsX-ray3.40Å0.290.06Type IV pilus biogenesis ATPase PilB
5tsg.1.C18.75homo-hexamerHHblitsX-ray3.40Å0.290.06Type IV pilus biogenesis ATPase PilB
5tsh.1.C18.75homo-hexamerHHblitsX-ray2.30Å0.290.06Type IV pilus biogenesis ATPase PilB
5tsh.1.B18.75homo-hexamerHHblitsX-ray2.30Å0.290.06Type IV pilus biogenesis ATPase PilB
5tsh.1.F18.75homo-hexamerHHblitsX-ray2.30Å0.290.06Type IV pilus biogenesis ATPase PilB
1nks.1.C26.67homo-trimerHHblitsX-ray2.57Å0.340.06ADENYLATE KINASE
1nks.1.B26.67homo-trimerHHblitsX-ray2.57Å0.340.06ADENYLATE KINASE
1nks.1.A26.67homo-trimerHHblitsX-ray2.57Å0.340.06ADENYLATE KINASE
3hjn.1.A23.33homo-dimerHHblitsX-ray2.10Å0.340.06Thymidylate kinase
3hjn.1.B23.33homo-dimerHHblitsX-ray2.10Å0.340.06Thymidylate kinase
5he9.1.A26.67hetero-oligomerHHblitsX-ray1.90Å0.340.06Helicase loader
5he8.2.B26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.2.A26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.6.B26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.3.B26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.3.A26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.6.A26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.5.A26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.5.B26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.1.A26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.4.A26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.4.B26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
5he8.1.B26.67homo-dimerHHblitsX-ray2.60Å0.340.06Helicase loader
1f48.1.A18.75monomerHHblitsX-ray2.30Å0.280.06ARSENITE-TRANSLOCATING ATPASE
1ki9.1.A31.03homo-trimerHHblitsX-ray2.76Å0.350.06adenylate kinase
1ki9.1.B31.03homo-trimerHHblitsX-ray2.76Å0.350.06adenylate kinase
1ki9.1.C31.03homo-trimerHHblitsX-ray2.76Å0.350.06adenylate kinase
5xbh.1.A27.59homo-dimerHHblitsX-ray2.23Å0.350.06Thymidylate kinase
2pbr.1.B27.59homo-dimerHHblitsX-ray1.96Å0.350.06Thymidylate kinase
2pbr.1.A27.59homo-dimerHHblitsX-ray1.96Å0.350.06Thymidylate kinase
4s35.1.B27.59homo-dimerHHblitsX-ray1.55Å0.350.06Thymidylate kinase
5xb2.1.B27.59homo-dimerHHblitsX-ray2.16Å0.350.06Thymidylate kinase
3iqx.1.A26.67homo-dimerHHblitsX-ray3.50Å0.320.06Tail-anchored protein targeting factor Get3
3igf.1.A26.67homo-dimerHHblitsX-ray2.00Å0.320.06All4481 protein
3igf.1.B26.67homo-dimerHHblitsX-ray2.00Å0.320.06All4481 protein
3uwo.1.A20.00monomerHHblitsX-ray1.70Å0.300.06Thymidylate kinase
3uwk.1.A20.00monomerHHblitsX-ray1.91Å0.300.06Thymidylate kinase
4bzp.1.A17.24homo-dimerHHblitsX-ray1.47Å0.330.06BIFUNCTIONAL ENZYME CYSN/CYSC
1xd9.1.A17.24homo-dimerHHblitsX-ray2.80Å0.320.06Nitrogenase iron protein 1
1xdb.1.A17.24homo-dimerHHblitsX-ray2.80Å0.320.06Nitrogenase iron protein 1
1de0.1.A17.24homo-dimerHHblitsX-ray2.40Å0.320.06NITROGENASE IRON PROTEIN
1xcp.1.A17.24homo-dimerHHblitsX-ray3.20Å0.320.06Nitrogenase iron protein 1
1xcp.2.A17.24homo-dimerHHblitsX-ray3.20Å0.320.06Nitrogenase iron protein 1
1m34.1.E17.24hetero-oligomerHHblitsX-ray2.30Å0.320.06Nitrogenase Iron Protein 1
1m1y.1.E17.24hetero-oligomerHHblitsX-ray3.20Å0.320.06nitrogenase IRON protein 1
1m1y.1.F17.24hetero-oligomerHHblitsX-ray3.20Å0.320.06nitrogenase IRON protein 1
2afi.1.E17.24hetero-oligomerHHblitsX-ray3.10Å0.320.06Nitrogenase iron protein 1
2afh.1.E17.24hetero-oligomerHHblitsX-ray2.10Å0.320.06Nitrogenase iron protein 1
2afh.1.F17.24hetero-oligomerHHblitsX-ray2.10Å0.320.06Nitrogenase iron protein 1
1g5p.1.A17.24homo-dimerHHblitsX-ray2.20Å0.320.06NITROGENASE IRON PROTEIN
1g5p.1.B17.24homo-dimerHHblitsX-ray2.20Å0.320.06NITROGENASE IRON PROTEIN
1g1m.1.A17.24homo-dimerHHblitsX-ray2.25Å0.320.06NITROGENASE IRON PROTEIN
1g1m.1.B17.24homo-dimerHHblitsX-ray2.25Å0.320.06NITROGENASE IRON PROTEIN
1fp6.1.A17.24homo-dimerHHblitsX-ray2.15Å0.320.06NITROGENASE IRON PROTEIN
1nip.1.A17.24homo-dimerHHblitsX-ray2.90Å0.320.06NITROGENASE IRON PROTEIN
1nip.1.B17.24homo-dimerHHblitsX-ray2.90Å0.320.06NITROGENASE IRON PROTEIN
5bq5.1.A20.00monomerHHblitsX-ray2.10Å0.290.06Insertion sequence IS5376 putative ATP-binding protein
3kjg.2.A21.43homo-dimerHHblitsX-ray2.30Å0.340.06CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kjg.1.A21.43monomerHHblitsX-ray2.30Å0.340.06CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kji.1.A21.43homo-dimerHHblitsX-ray2.13Å0.340.06CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kji.2.A21.43homo-dimerHHblitsX-ray2.13Å0.340.06CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kjh.1.A21.43homo-dimerHHblitsX-ray1.90Å0.340.06CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kje.1.A21.43monomerHHblitsX-ray2.30Å0.340.06CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
1kht.1.A33.33homo-trimerHHblitsX-ray2.50Å0.360.05adenylate kinase
1kht.1.B33.33homo-trimerHHblitsX-ray2.50Å0.360.05adenylate kinase
1kht.1.C33.33homo-trimerHHblitsX-ray2.50Å0.360.05adenylate kinase
3tqc.1.A33.33homo-dimerHHblitsX-ray2.30Å0.360.05Pantothenate kinase
1esm.1.A29.63homo-dimerHHblitsX-ray2.50Å0.360.05PANTOTHENATE KINASE
1esm.1.B29.63homo-dimerHHblitsX-ray2.50Å0.360.05PANTOTHENATE KINASE
1esn.1.A29.63homo-dimerHHblitsX-ray2.60Å0.360.05PANTOTHENATE KINASE
1esn.1.B29.63homo-dimerHHblitsX-ray2.60Å0.360.05PANTOTHENATE KINASE
1esn.2.B29.63homo-dimerHHblitsX-ray2.60Å0.360.05PANTOTHENATE KINASE
3h86.2.A30.77homo-trimerHHblitsX-ray2.50Å0.380.05Adenylate kinase
3h86.1.B30.77homo-trimerHHblitsX-ray2.50Å0.380.05Adenylate kinase
3h86.1.C30.77homo-trimerHHblitsX-ray2.50Å0.380.05Adenylate kinase
3h86.1.A30.77homo-trimerHHblitsX-ray2.50Å0.380.05Adenylate kinase
4wza.1.E14.29hetero-oligomerHHblitsX-ray1.90Å0.310.06Nitrogenase iron protein 1
4wza.1.F14.29hetero-oligomerHHblitsX-ray1.90Å0.310.06Nitrogenase iron protein 1
2c8v.1.A14.29monomerHHblitsX-ray2.50Å0.310.06NITROGENASE IRON PROTEIN 1
1cp2.1.A17.86homo-dimerHHblitsX-ray1.93Å0.300.06NITROGENASE IRON PROTEIN
1cp2.1.B17.86homo-dimerHHblitsX-ray1.93Å0.300.06NITROGENASE IRON PROTEIN
3avo.1.A26.92homo-dimerHHblitsX-ray2.55Å0.340.05Pantothenate kinase
4ba6.1.A24.00monomerHHblitsX-ray1.42Å0.360.05ENDOGLUCANASE CEL5A
5afe.1.A24.00monomerHHblitsX-ray2.60Å0.360.05ENDOGLUCANASE CEL5A
4ypn.1.A28.00monomerHHblitsX-ray2.07Å0.360.05Lon protease
4kss.1.A32.00homo-hexamerHHblitsX-ray7.58Å0.360.05Type II secretion system protein E, hemolysin-coregulated protein
4kss.1.B32.00homo-hexamerHHblitsX-ray7.58Å0.360.05Type II secretion system protein E, hemolysin-coregulated protein
4kss.1.C32.00homo-hexamerHHblitsX-ray7.58Å0.360.05Type II secretion system protein E, hemolysin-coregulated protein
4kss.1.D32.00homo-hexamerHHblitsX-ray7.58Å0.360.05Type II secretion system protein E, hemolysin-coregulated protein
4kss.1.E32.00homo-hexamerHHblitsX-ray7.58Å0.360.05Type II secretion system protein E, hemolysin-coregulated protein
4kss.1.F32.00homo-hexamerHHblitsX-ray7.58Å0.360.05Type II secretion system protein E, hemolysin-coregulated protein
1p9r.1.A32.00monomerHHblitsX-ray2.50Å0.350.05General secretion pathway protein E
1q3t.1.A33.33monomerHHblitsNMRNA0.370.05Cytidylate kinase
2ypj.1.A25.00monomerHHblitsX-ray2.35Å0.370.05ENDOGLUCANASE CEL5A
1tmk.1.A25.00homo-dimerHHblitsX-ray2.10Å0.370.05THYMIDYLATE KINASE
3tmk.1.A25.00homo-dimerHHblitsX-ray2.00Å0.370.05THYMIDYLATE KINASE
3tmk.1.B25.00homo-dimerHHblitsX-ray2.00Å0.370.05THYMIDYLATE KINASE
4ksr.1.A33.33homo-hexamerHHblitsX-ray4.20Å0.360.05Type II secretion system protein E, Hemolysin-coregulated protein
4ksr.1.B33.33homo-hexamerHHblitsX-ray4.20Å0.360.05Type II secretion system protein E, Hemolysin-coregulated protein
4ksr.1.C33.33homo-hexamerHHblitsX-ray4.20Å0.360.05Type II secretion system protein E, Hemolysin-coregulated protein
2v54.1.A37.50homo-dimerHHblitsX-ray2.40Å0.350.05THYMIDYLATE KINASE
1we2.1.A30.43monomerHHblitsX-ray2.30Å0.370.05Shikimate kinase
1zyu.1.A30.43monomerHHblitsX-ray2.90Å0.370.05Shikimate kinase
3baf.1.A30.43monomerHHblitsX-ray2.25Å0.370.05Shikimate kinase
2g1j.1.A30.43monomerHHblitsX-ray2.00Å0.370.05Shikimate kinase
2g1j.2.A30.43monomerHHblitsX-ray2.00Å0.370.05Shikimate kinase
2dfn.1.A30.43monomerHHblitsX-ray1.93Å0.370.05Shikimate kinase
2dft.1.A30.43homo-tetramerHHblitsX-ray2.80Å0.370.05Shikimate kinase
2dft.1.B30.43homo-tetramerHHblitsX-ray2.80Å0.370.05Shikimate kinase
2dft.1.C30.43homo-tetramerHHblitsX-ray2.80Å0.370.05Shikimate kinase
4bqs.2.A30.43monomerHHblitsX-ray2.15Å0.370.05SHIKIMATE KINASE
4bqs.3.A30.43monomerHHblitsX-ray2.15Å0.370.05SHIKIMATE KINASE
3hr7.1.A12.50homo-dimerHHblitsX-ray1.80Å0.330.05Shikimate kinase
3hr7.1.B12.50homo-dimerHHblitsX-ray1.80Å0.330.05Shikimate kinase
1zui.1.A12.50monomerHHblitsX-ray2.30Å0.330.05Shikimate kinase
1zuh.1.A12.50monomerHHblitsX-ray1.80Å0.330.05Shikimate kinase
3muf.1.A12.50monomerHHblitsX-ray2.30Å0.330.05Shikimate kinase
1e6c.1.A30.43monomerHHblitsX-ray1.80Å0.360.05SHIKIMATE KINASE
1ixr.1.C30.43hetero-oligomerHHblitsX-ray3.30Å0.360.05RuvB
1kag.1.A40.91monomerHHblitsX-ray2.05Å0.390.04Shikimate kinase I
1kag.2.A40.91monomerHHblitsX-ray2.05Å0.390.04Shikimate kinase I
3mrs.1.A12.50monomerHHblitsX-ray2.40Å0.320.05Shikimate kinase
4e22.1.A40.91monomerHHblitsX-ray2.32Å0.380.04Cytidylate kinase
4aek.1.A31.82monomerHHblitsX-ray1.75Å0.380.04ENDOGLUCANASE CEL5A
4ttq.1.A27.27monomerHHblitsX-ray2.20Å0.380.04Dephospho-CoA kinase
4ttp.1.A27.27monomerHHblitsX-ray2.20Å0.380.04Dephospho-CoA kinase
3iim.1.A40.91monomerHHblitsX-ray2.00Å0.380.04Coilin-interacting nuclear ATPase protein
2pt5.2.A27.27monomerHHblitsX-ray2.10Å0.370.04Shikimate kinase
2pt5.1.A27.27monomerHHblitsX-ray2.10Å0.370.04Shikimate kinase
2pt5.3.A27.27monomerHHblitsX-ray2.10Å0.370.04Shikimate kinase
2pt5.4.A27.27monomerHHblitsX-ray2.10Å0.370.04Shikimate kinase
2iys.1.A31.82monomerHHblitsX-ray1.40Å0.370.04SHIKIMATE KINASE
2iyv.1.A31.82monomerHHblitsX-ray1.35Å0.370.04SHIKIMATE KINASE
2iyx.1.A31.82monomerHHblitsX-ray1.49Å0.370.04SHIKIMATE KINASE
2iyq.1.A31.82monomerHHblitsX-ray1.80Å0.370.04SHIKIMATE KINASE
2iyr.1.A31.82monomerHHblitsX-ray1.98Å0.370.04SHIKIMATE KINASE
2iyr.2.A31.82monomerHHblitsX-ray1.98Å0.370.04SHIKIMATE KINASE
3vaa.1.A36.36monomerHHblitsX-ray1.70Å0.360.04Shikimate kinase
3vaa.2.A36.36monomerHHblitsX-ray1.70Å0.360.04Shikimate kinase
3vaa.3.A36.36monomerHHblitsX-ray1.70Å0.360.04Shikimate kinase
4l16.1.A31.82monomerHHblitsX-ray2.80Å0.360.04Fidgetin-like protein 1
4l15.1.A31.82monomerHHblitsX-ray2.60Å0.360.04Fidgetin-like protein 1
3n2e.1.A13.04monomerHHblitsX-ray2.53Å0.320.05Shikimate kinase