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SWISS-MODEL Homology Modelling Report

Model Building Report

This document lists the results for the homology modelling project "Q9HVZ7" submitted to SWISS-MODEL workspace on Oct. 17, 2017, 6:47 p.m..The submitted primary amino acid sequence is given in Table T1.

If you use any results in your research, please cite the relevant publications:

Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano Gallo Cassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede. (2014). SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Research (1 July 2014) 42 (W1): W252-W258; doi: 10.1093/nar/gku340.
Arnold, K., Bordoli, L., Kopp, J. and Schwede, T. (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics, 22, 195-201.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350

Results

The SWISS-MODEL template library (SMTL version 2017-10-11, PDB release 2017-10-06) was searched with Blast (Altschul et al., 1997) and HHBlits (Remmert, et al., 2011) for evolutionary related structures matching the target sequence in Table T1. For details on the template search, see Materials and Methods. Overall 657 templates were found (Table T2).

Models

The following models were built (see Materials and Methods "Model Building"):

Model #01	File	Built with	Oligo-State	Ligands	GMQE	QMEAN
	PDB	ProMod3 Version 1.0.2.	MONOMER	1 x ALA: ALANINE; 1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER; 1 x MG: MAGNESIUM ION; 1 x UDP: URIDINE-5'-DIPHOSPHATE;	0.98	0.33

QMEAN	0.33
Cβ	0.20
All Atom	0.31
Solvation	0.48
Torsion	0.20

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Range	Coverage	Description
4cvm.1.A	99.56	monomer	HHblits	X-ray	2.06Å	0.59	1 - 451	1.00	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D- ALANINE LIGASE

Ligand	Added to Model	Description
ALA	✓	ALANINE
ANP	✓	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
MG	✓	MAGNESIUM ION
UDP	✓	URIDINE-5'-DIPHOSPHATE
FGA	✕ - Clashing with protein.	GAMMA-D-GLUTAMIC ACID
MG	✕ - Clashing with protein.	MAGNESIUM ION
MUB	✕ - Clashing with protein.	N-ACETYLMURAMIC ACID

Target    MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL
4cvm.1.A  MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL

Target    LVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS
4cvm.1.A  LVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS

Target    AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGR
4cvm.1.A  AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGR

Target    PLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPV
4cvm.1.A  PLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPV

Target    KGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM
4cvm.1.A  KGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM

Target    AHAVQAFGATGRHFADQASLIGALATEQPTTTILIKGSRSAAMDKVVAALCGSSEESH
4cvm.1.A  AHAVQAFGATGRHFADQASLIGALATEDPTTTILIKGSRSAAMDKVVAALCGSSEESH

Model #02	File	Built with	Oligo-State	Ligands	GMQE	QMEAN
	PDB	ProMod3 Version 1.0.2.	MONOMER	None	0.53	-5.19

QMEAN	-5.19
Cβ	-2.49
All Atom	-3.66
Solvation	-2.24
Torsion	-4.40

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Range	Coverage	Description
1eeh.1.A	23.26	monomer	HHblits	X-ray	1.90Å	0.31	26 - 450	0.84	UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE

Ligand	Added to Model	Description
UMA	✕ - Binding site not conserved.	URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE

Target    MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIALSGPR--FDGHDYLAEVAAKGAVAALVEREVADAPLP
1eeh.1.A  -------------------------TPRVMDTRMTPPGLDKLP-EAVERHTGSLN--D-EWLMAADLIVASPGIA-LAHP

Target    QLLVRD--TRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAP
1eeh.1.A  SLSAAADAGIEIVGDIELFCRE-AQAPIVAITGSNGKSTVTTLVGEMAKAAG----VNVGVGGN----IGLPALML-LDD

Target    QHRSAVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFG-GPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKA
1eeh.1.A  ECELYVLELSSFQLET----TSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYEN---AKVCVVNADDALTMPIRG

Target    RASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGE--AQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAG
1eeh.1.A  -ADE-RCVSFGVN--MGDYHLNHQQG--ET-W-LRV--KGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKA

Target    LQALQPVKGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSAL
1eeh.1.A  LTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLH-VDGTLHLLLGGDGKSADF-----SPLARYLNGDNVRL

Target    YAVGPLMAHAVQAFGATGRHFADQASLIGALATEQ-PTTTILIKG------------SRSAAMDKVVAALCGSSEESH
1eeh.1.A  YCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKEL--------

Model #03	File	Built with	Oligo-State	Ligands	GMQE	QMEAN
	PDB	ProMod3 Version 1.0.2.	MONOMER (matching prediction)	None	0.11	-4.06

QMEAN	-4.06
Cβ	-2.47
All Atom	-1.71
Solvation	-1.32
Torsion	-3.25

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Range	Coverage	Description
4yeg.1.A	11.97	homo-tetramer	HHblits	X-ray	2.23Å	0.26	87 - 231	0.31	Polyphosphate kinase 2

The template contained no ligands.

Target    MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL
4yeg.1.A  --------------------------------------------------------------------------------

Target    LVRDTRAALGRLGALNRRKFTGPLAAMTGS--SGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLT--LL-QLA
4yeg.1.A  ------IELLKFQKWVKENNKKVLIIFEGRDAAGKGGTIKRMMEHLNPRGA---KVIALEKPSEQERNQWYFQRYIEHLP

Target    PQHRSAVIELGASRI---------G----------EIA---Y-TVELTRPHVAIITNAGTAHV-GEF-------------
4yeg.1.A  SGGEIVLFDRSWYNRAGVERVMGFCTEREYFLFLEQAPQLEKMLVDSGTMIIKFWFSVSQQEQKNRFAARESHPLKQWKL

Target    --------GGPEKIVEAKGEILEGLA--ADGTAVLNLDDKAFDTWKARASGRPLLTFSLDRPQADFRAADLQRDARGCMG
4yeg.1.A  SPIDKASLDKWDDYTEAKERMFIYTDKPYAPWVIVKSDDKKRA-------------------------------------

Target    FRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPVKGRAVAQLTASGLRVIDDSYNANPASML
4yeg.1.A  --------------------------------------------------------------------------------

Target    AAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLMAHAVQAFGATGRHFADQASLIGALATEQ
4yeg.1.A  --------------------------------------------------------------------------------

Target    PTTTILIKGSRSAAMDKVVAALCGSSEESH
4yeg.1.A  ------------------------------

Model #04	File	Built with	Oligo-State	Ligands	GMQE	QMEAN
	PDB	ProMod3 Version 1.0.2.	MONOMER	None	0.04	-2.63

QMEAN	-2.63
Cβ	-1.77
All Atom	-0.78
Solvation	-1.22
Torsion	-2.04

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Range	Coverage	Description
4jmp.1.A	15.38	monomer	HHblits	X-ray	1.30Å	0.27	86 - 140	0.11	C-terminal fragment of CapA, Protein tyrosine kinase

The template contained no ligands.

Target    MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL
4jmp.1.A  --------------------------------------------------------------------------------

Target    LVRDTRAALGRLGALNRRK---FTGPLAAMTGS---SGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQL
4jmp.1.A  -----SEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGY---KTLIVDGD--------------

Target    APQHRSAVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWK
4jmp.1.A  --------------------------------------------------------------------------------

Target    ARASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGL
4jmp.1.A  --------------------------------------------------------------------------------

Target    QALQPVKGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALY
4jmp.1.A  --------------------------------------------------------------------------------

Target    AVGPLMAHAVQAFGATGRHFADQASLIGALATEQPTTTILIKGSRSAAMDKVVAALCGSSEESH
4jmp.1.A  ----------------------------------------------------------------

Materials and Methods

Template Search

Template search with Blast and HHBlits has been performed against the SWISS-MODEL template library (SMTL, last update: 2017-10-11, last included PDB release: 2017-10-06).

The target sequence was searched with BLAST (Altschul et al., 1997) against the primary amino acid sequence contained in the SMTL. A total of 14 templates were found.

An initial HHblits profile has been built using the procedure outlined in (Remmert, et al., 2011), followed by 1 iteration of HHblits against NR20. The obtained profile has then be searched against all profiles of the SMTL. A total of 647 templates were found.

Template Selection

For each identified template, the template's quality has been predicted from features of the target-template alignment. The templates with the highest quality have then been selected for model building.

Model Building

Models are built based on the target-template alignment using ProMod3. Coordinates which are conserved between the target and the template are copied from the template to the model. Insertions and deletions are remodelled using a fragment library. Side chains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field. In case loop modelling with ProMod3 fails, an alternative model is built with PROMOD-II (Guex, et al., 1997).

Model Quality Estimation

The global and per-residue model quality has been assessed using the QMEAN scoring function (Benkert, et al., 2011) . For improved performance, weights of the individual QMEAN terms have been trained specifically for SWISS-MODEL.

Ligand Modelling

Ligands present in the template structure are transferred by homology to the model when the following criteria are met (Gallo -Casserino, to be published): (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contact with the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between the target and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The model summary includes information on why and which ligand has not been included.

Oligomeric State Conservation

Homo-oligomeric structure of the target protein is predicted based on the analysis of pairwise interfaces of the identified template structures. For each relevant interface between polypeptide chains (interfaces with more than 10 residue-residue interactions), the QscoreOligomer (Mariani et al., 2011) is predicted from features such as similarity to target and frequency of observing this interface in the identified templates (Kiefer, Bertoni, Biasini, to be published). The prediction is performed with a random forest regressor using these features as input parameters to predict the probability of conservation for each interface. The QscoreOligomer of the whole complex is then calculated as the weight-averaged QscoreOligomer of the interfaces. The oligomeric state of the target is predicted to be the same as in the template when QscoreOligomer is predicted to be higher or equal to 0.5.

References

Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25, 3389-3402.
Remmert, M., Biegert, A., Hauser, A. and Soding, J. (2012) HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nat Methods, 9, 173-175.
Guex, N. and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis, 18, 2714-2723.
Sali, A. and Blundell, T.L. (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol, 234, 779-815.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350.
Mariani, V., Kiefer, F., Schmidt, T., Haas, J. and Schwede, T. (2011) Assessment of template based protein structure predictions in CASP9. Proteins, 79 Suppl 10, 37-58.

Table T1:

Primary amino acid sequence for which templates were searched and models were built.

MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQLLVRDTRAALGRLGALNRRKF
TGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRSAVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGG
PEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAA
HALGVPLDGIVAGLQALQPVKGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM
AHAVQAFGATGRHFADQASLIGALATEQPTTTILIKGSRSAAMDKVVAALCGSSEESH

Table T2:

Template	Seq Identity	Oligo-state	Found by	Method	Resolution	Seq Similarity	Coverage	Description
4cvl.1.A	99.56	monomer	HHblits	X-ray	2.98Å	0.59	1.00	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
4cvm.1.A	99.56	monomer	HHblits	X-ray	2.06Å	0.59	1.00	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D- ALANINE LIGASE
1gg4.1.A	48.40	monomer	BLAST	X-ray	2.30Å	0.42	0.96	UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE
1gg4.1.A	46.05	monomer	HHblits	X-ray	2.30Å	0.40	0.97	UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE
4qf5.1.A	42.18	monomer	HHblits	X-ray	2.80Å	0.38	0.96	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4qdi.1.A	42.18	monomer	HHblits	X-ray	1.80Å	0.38	0.96	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4ziy.1.A	41.95	monomer	HHblits	X-ray	1.85Å	0.38	0.96	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4qf5.1.A	44.79	monomer	BLAST	X-ray	2.80Å	0.40	0.90	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4qdi.1.A	44.79	monomer	BLAST	X-ray	1.80Å	0.40	0.90	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
4ziy.1.A	44.31	monomer	BLAST	X-ray	1.85Å	0.40	0.90	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
3zm5.1.A	29.66	monomer	HHblits	X-ray	2.94Å	0.35	0.95	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
2am2.1.A	29.93	monomer	HHblits	X-ray	2.80Å	0.35	0.94	UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein
2xja.1.A	26.64	monomer	HHblits	X-ray	3.00Å	0.31	0.93	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
2wtz.1.A	26.64	monomer	HHblits	X-ray	3.00Å	0.31	0.93	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
3zl8.1.A	28.81	monomer	HHblits	X-ray	1.65Å	0.34	0.90	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
4c12.1.A	22.95	homo-dimer	HHblits	X-ray	1.80Å	0.31	0.93	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
4bub.1.A	24.88	monomer	HHblits	X-ray	2.90Å	0.32	0.92	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4bub.2.A	24.88	monomer	HHblits	X-ray	2.90Å	0.32	0.92	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
1e8c.1.A	21.60	monomer	HHblits	X-ray	2.00Å	0.30	0.93	UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
2y67.1.A	23.20	monomer	HHblits	X-ray	1.85Å	0.31	0.85	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
2xpc.1.A	23.51	monomer	HHblits	X-ray	1.49Å	0.31	0.84	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5f.1.A	23.26	monomer	HHblits	X-ray	1.90Å	0.31	0.84	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
1uag.1.A	23.26	monomer	HHblits	X-ray	1.95Å	0.31	0.84	UDP-N-ACETYLMURAMOYL-L-ALANINE/:D-GLUTAMATE LIGASE
1eeh.1.A	23.26	monomer	HHblits	X-ray	1.90Å	0.31	0.84	UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
2uag.1.A	23.26	monomer	HHblits	X-ray	1.70Å	0.31	0.84	PROTEIN (UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE)
1e0d.1.A	23.26	monomer	HHblits	X-ray	2.40Å	0.31	0.84	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5e.1.A	23.26	monomer	HHblits	X-ray	1.84Å	0.31	0.84	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
3lk7.1.A	19.95	monomer	HHblits	X-ray	1.50Å	0.30	0.85	UDP-N-acetylmuramoylalanine--D-glutamate ligase
2am2.1.A	34.40	monomer	BLAST	X-ray	2.80Å	0.37	0.75	UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein
3zm5.1.A	34.40	monomer	BLAST	X-ray	2.94Å	0.37	0.75	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
3hn7.1.A	18.11	monomer	HHblits	X-ray	1.65Å	0.28	0.83	UDP-N-acetylmuramate-L-alanine ligase
4buc.1.A	14.10	monomer	HHblits	X-ray	2.17Å	0.27	0.82	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
4buc.2.A	14.10	monomer	HHblits	X-ray	2.17Å	0.27	0.82	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
3zl8.1.A	35.17	monomer	BLAST	X-ray	1.65Å	0.37	0.71	UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
4bub.1.A	33.23	monomer	BLAST	X-ray	2.90Å	0.36	0.72	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4bub.2.A	33.23	monomer	BLAST	X-ray	2.90Å	0.36	0.72	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE
4hv4.1.A	22.47	monomer	HHblits	X-ray	2.25Å	0.30	0.78	UDP-N-acetylmuramate--L-alanine ligase
4hv4.2.A	22.47	monomer	HHblits	X-ray	2.25Å	0.30	0.78	UDP-N-acetylmuramate--L-alanine ligase
2f00.1.A	22.54	homo-dimer	HHblits	X-ray	2.50Å	0.30	0.78	UDP-N-acetylmuramate--L-alanine ligase
1p3d.1.A	21.97	monomer	HHblits	X-ray	1.70Å	0.30	0.78	UDP-N-acetylmuramate--alanine ligase
1gqq.1.A	21.97	homo-dimer	HHblits	X-ray	3.10Å	0.30	0.78	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1gqq.1.B	21.97	homo-dimer	HHblits	X-ray	3.10Å	0.30	0.78	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1p31.1.A	21.97	monomer	HHblits	X-ray	1.85Å	0.30	0.78	UDP-N-acetylmuramate--alanine ligase
1gqy.1.B	21.97	homo-dimer	HHblits	X-ray	1.80Å	0.30	0.78	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1gqy.1.A	21.97	homo-dimer	HHblits	X-ray	1.80Å	0.30	0.78	UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
1j6u.1.A	18.38	monomer	HHblits	X-ray	2.30Å	0.28	0.78	UDP-N-acetylmuramate-alanine ligase MurC
2gca.1.A	20.59	monomer	HHblits	X-ray	2.40Å	0.29	0.74	Folylpolyglutamate synthase
2gc6.1.A	20.59	monomer	HHblits	X-ray	1.90Å	0.29	0.74	Folylpolyglutamate synthase
2gcb.1.A	20.94	monomer	HHblits	X-ray	2.30Å	0.29	0.74	Folylpolyglutamate synthase
1fgs.1.A	20.65	monomer	HHblits	X-ray	2.40Å	0.29	0.74	FOLYLPOLYGLUTAMATE SYNTHETASE
1jbw.1.A	20.65	monomer	HHblits	X-ray	1.85Å	0.29	0.74	FOLYLPOLYGLUTAMATE SYNTHASE
1jbv.1.A	20.65	monomer	HHblits	X-ray	1.95Å	0.29	0.74	FOLYLPOLYGLUTAMATE SYNTHASE
2vor.1.A	21.30	monomer	HHblits	X-ray	2.30Å	0.29	0.74	FOLYLPOLYGLUTAMATE SYNTHASE PROTEIN FOLC
2gc5.1.A	20.35	monomer	HHblits	X-ray	1.85Å	0.29	0.74	Folylpolyglutamate synthase
1w7k.1.A	19.70	monomer	HHblits	X-ray	2.10Å	0.29	0.73	FOLC BIFUNCTIONAL PROTEIN
1w78.1.A	19.70	monomer	HHblits	X-ray	1.82Å	0.29	0.73	FOLC BIFUNCTIONAL PROTEIN
1o5z.1.A	17.99	monomer	HHblits	X-ray	2.10Å	0.28	0.74	folylpolyglutamate synthase/dihydrofolate synthase
3nrs.1.A	19.33	monomer	HHblits	X-ray	1.80Å	0.29	0.71	Dihydrofolate:folylpolyglutamate synthetase
3pyz.1.A	19.33	monomer	HHblits	X-ray	2.10Å	0.29	0.71	Bifunctional folylpolyglutamate synthase/dihydrofolate synthase
4c12.1.A	28.18	homo-dimer	BLAST	X-ray	1.80Å	0.34	0.64	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
3lk7.1.A	30.93	monomer	BLAST	X-ray	1.50Å	0.34	0.52	UDP-N-acetylmuramoylalanine--D-glutamate ligase
5vvw.1.A	27.92	homo-tetramer	HHblits	X-ray	2.30Å	0.33	0.52	UDP-N-acetylmuramate--L-alanine ligase
3eag.1.A	22.09	homo-dimer	HHblits	X-ray	2.55Å	0.30	0.54	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
3eag.1.B	22.09	homo-dimer	HHblits	X-ray	2.55Å	0.30	0.54	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
5vvw.1.A	30.81	homo-tetramer	BLAST	X-ray	2.30Å	0.35	0.43	UDP-N-acetylmuramate--L-alanine ligase
2h08.1.A	10.42	homo-hexamer	HHblits	X-ray	2.50Å	0.26	0.31	Ribose-phosphate pyrophosphokinase I
4yeg.1.A	11.97	homo-tetramer	HHblits	X-ray	2.23Å	0.26	0.31	Polyphosphate kinase 2
4yeg.1.B	11.97	homo-tetramer	HHblits	X-ray	2.23Å	0.26	0.31	Polyphosphate kinase 2
4yeg.1.C	11.97	homo-tetramer	HHblits	X-ray	2.23Å	0.26	0.31	Polyphosphate kinase 2
4yeg.1.D	11.97	homo-tetramer	HHblits	X-ray	2.23Å	0.26	0.31	Polyphosphate kinase 2
5llb.1.C	11.97	hetero-oligomer	HHblits	X-ray	1.92Å	0.25	0.31	Polyphosphate kinase 2
5ll0.1.B	12.06	homo-tetramer	HHblits	X-ray	1.96Å	0.26	0.31	Polyphosphate kinase 2
5ll0.1.A	12.06	homo-tetramer	HHblits	X-ray	1.96Å	0.26	0.31	Polyphosphate kinase 2
5ll0.1.C	12.06	homo-tetramer	HHblits	X-ray	1.96Å	0.26	0.31	Polyphosphate kinase 2
5llb.1.A	12.06	hetero-oligomer	HHblits	X-ray	1.92Å	0.26	0.31	Polyphosphate kinase 2
5llb.1.B	12.06	hetero-oligomer	HHblits	X-ray	1.92Å	0.26	0.31	Polyphosphate kinase 2
5llf.1.A	12.06	homo-dimer	HHblits	X-ray	2.31Å	0.26	0.31	Polyphosphate kinase 2
3czp.1.A	12.86	homo-dimer	HHblits	X-ray	2.00Å	0.25	0.31	Putative polyphosphate kinase 2
5lc9.1.A	9.22	homo-tetramer	HHblits	X-ray	1.90Å	0.25	0.31	Polyphosphate:AMP phosphotransferase
5ld1.1.A	9.22	homo-tetramer	HHblits	X-ray	2.09Å	0.25	0.31	Polyphosphate:AMP phosphotransferase
3mvn.1.A	16.94	monomer	HHblits	X-ray	1.90Å	0.29	0.27	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-medo-diaminopimelate ligase
3czp.1.A	13.49	homo-dimer	HHblits	X-ray	2.00Å	0.27	0.28	Putative polyphosphate kinase 2
3rhf.1.A	12.00	homo-dimer	HHblits	X-ray	2.45Å	0.26	0.27	Putative polyphosphate kinase 2 family protein
3rhf.1.B	12.00	homo-dimer	HHblits	X-ray	2.45Å	0.26	0.27	Putative polyphosphate kinase 2 family protein
3czq.1.A	11.90	homo-tetramer	HHblits	X-ray	2.23Å	0.26	0.28	Putative polyphosphate kinase 2
2obn.1.A	16.22	homo-dimer	HHblits	X-ray	2.30Å	0.29	0.24	Hypothetical protein
2obn.1.B	16.22	homo-dimer	HHblits	X-ray	2.30Å	0.29	0.24	Hypothetical protein
4f8e.1.A	12.62	homo-hexamer	HHblits	X-ray	2.27Å	0.26	0.22	Ribose-phosphate pyrophosphokinase 1
3igf.1.A	17.58	homo-dimer	HHblits	X-ray	2.00Å	0.28	0.20	All4481 protein
3igf.1.B	17.58	homo-dimer	HHblits	X-ray	2.00Å	0.28	0.20	All4481 protein
2vhc.1.A	22.35	homo-trimer	HHblits	X-ray	2.35Å	0.31	0.19	NTPASE P4
2mr6.1.A	8.75	monomer	HHblits	NMR	NA	0.25	0.17	De novo designed Protein OR462
3qw4.1.B	24.29	homo-tetramer	HHblits	X-ray	3.00Å	0.27	0.15	UMP synthase
3qw4.1.A	24.29	homo-tetramer	HHblits	X-ray	3.00Å	0.27	0.15	UMP synthase
3dg8.1.A	16.42	hetero-oligomer	HHblits	X-ray	2.58Å	0.27	0.15	Bifunctional dihydrofolate reductase-thymidylate synthase
3dg8.2.A	16.42	hetero-oligomer	HHblits	X-ray	2.58Å	0.27	0.15	Bifunctional dihydrofolate reductase-thymidylate synthase
1j3k.1.A	16.42	hetero-oligomer	HHblits	X-ray	2.10Å	0.27	0.15	Bifunctional dihydrofolate reductase-thymidylate synthase
1j3k.1.B	16.42	hetero-oligomer	HHblits	X-ray	2.10Å	0.27	0.15	Bifunctional dihydrofolate reductase-thymidylate synthase
1u32.1.A	16.42	monomer	HHblits	X-ray	2.00Å	0.27	0.15	Serine/threonine protein phosphatase PP1-gamma catalytic subunit
4iyp.1.B	13.24	hetero-oligomer	HHblits	X-ray	2.80Å	0.26	0.15	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
4v0v.1.A	16.42	hetero-oligomer	HHblits	X-ray	1.61Å	0.27	0.15	SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT
1su1.1.A	13.64	homo-tetramer	HHblits	X-ray	2.25Å	0.27	0.14	Hypothetical protein yfcE
1su1.1.C	13.64	homo-tetramer	HHblits	X-ray	2.25Å	0.27	0.14	Hypothetical protein yfcE
2nyd.1.A	14.06	homo-hexamer	HHblits	X-ray	2.00Å	0.28	0.14	UPF0135 protein SA1388
3lnl.1.A	14.06	homo-hexamer	HHblits	X-ray	2.00Å	0.28	0.14	UPF0135 protein SA1388
1uf3.1.A	6.25	homo-octamer	HHblits	X-ray	2.10Å	0.27	0.14	hypothetical protein TT1561
1uf3.1.C	6.25	homo-octamer	HHblits	X-ray	2.10Å	0.27	0.14	hypothetical protein TT1561
2yzk.1.B	19.35	homo-dimer	HHblits	X-ray	1.80Å	0.28	0.14	Orotate phosphoribosyltransferase
2yzk.1.A	19.35	homo-dimer	HHblits	X-ray	1.80Å	0.28	0.14	Orotate phosphoribosyltransferase
1mw7.1.A	20.00	monomer	HHblits	X-ray	2.00Å	0.30	0.13	HYPOTHETICAL PROTEIN HP0162
2blc.1.A	16.13	monomer	HHblits	X-ray	2.25Å	0.27	0.14	DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE
2bla.1.A	16.13	monomer	HHblits	X-ray	2.50Å	0.27	0.14	DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE
3qfn.1.A	14.75	homo-dimer	HHblits	X-ray	2.31Å	0.27	0.13	Putative uncharacterized protein
1j3j.1.A	14.75	hetero-oligomer	HHblits	X-ray	2.30Å	0.27	0.13	Bifunctional dihydrofolate reductase-thymidylate synthase
1j3j.1.B	14.75	hetero-oligomer	HHblits	X-ray	2.30Å	0.27	0.13	Bifunctional dihydrofolate reductase-thymidylate synthase
2r94.1.A	15.25	homo-tetramer	HHblits	X-ray	2.20Å	0.27	0.13	2-Keto-3-deoxy-(6-phospho-)gluconate aldolase
2nux.1.A	10.53	homo-tetramer	HHblits	X-ray	2.50Å	0.24	0.12	2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase
2yda.1.A	10.53	homo-tetramer	HHblits	X-ray	1.91Å	0.24	0.12	2-KETO-3-DEOXY GLUCONATE ALDOLASE
1w3i.1.A	10.53	homo-tetramer	HHblits	X-ray	1.70Å	0.24	0.12	2-KETO-3-DEOXY GLUCONATE ALDOLASE
1w3n.1.A	10.53	homo-tetramer	HHblits	X-ray	2.10Å	0.24	0.12	2-KETO-3-DEOXY GLUCONATE ALDOLASE
13pk.1.A	11.32	monomer	HHblits	X-ray	2.50Å	0.27	0.12	3-PHOSPHOGLYCERATE KINASE
16pk.1.A	11.32	monomer	HHblits	X-ray	1.60Å	0.27	0.12	3-PHOSPHOGLYCERATE KINASE
4jmp.1.A	15.38	monomer	HHblits	X-ray	1.30Å	0.27	0.11	C-terminal fragment of CapA, Protein tyrosine kinase
3cio.1.A	26.53	homo-dimer	HHblits	X-ray	2.50Å	0.31	0.11	Tyrosine-protein kinase etk
3cio.1.B	26.53	homo-dimer	HHblits	X-ray	2.50Å	0.31	0.11	Tyrosine-protein kinase etk
1rz3.1.A	29.55	monomer	HHblits	X-ray	1.90Å	0.31	0.10	hypothetical protein RBSTP0775
5b3f.1.A	19.05	homo-dimer	HHblits	X-ray	2.50Å	0.29	0.09	Phosphoribulokinase/uridine kinase
5b3f.1.B	19.05	homo-dimer	HHblits	X-ray	2.50Å	0.29	0.09	Phosphoribulokinase/uridine kinase
3uie.1.A	28.21	homo-dimer	HHblits	X-ray	1.79Å	0.32	0.09	Adenylyl-sulfate kinase 1, chloroplastic
5mvr.1.A	28.95	monomer	HHblits	X-ray	1.76Å	0.33	0.08	tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
3tlx.1.A	21.95	monomer	HHblits	X-ray	2.75Å	0.27	0.09	Adenylate kinase 2
3tlx.3.A	21.95	monomer	HHblits	X-ray	2.75Å	0.27	0.09	Adenylate kinase 2
3tlx.4.A	21.95	monomer	HHblits	X-ray	2.75Å	0.27	0.09	Adenylate kinase 2
3nwj.1.A	29.73	monomer	HHblits	X-ray	2.35Å	0.33	0.08	AtSK2
3nwj.2.A	29.73	monomer	HHblits	X-ray	2.35Å	0.33	0.08	AtSK2
3bfv.1.A	21.62	monomer	HHblits	X-ray	1.80Å	0.30	0.08	Membrane protein CapA1, Protein tyrosine kinase
3la6.1.F	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.1.B	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.1.C	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.1.D	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.1.E	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.1.A	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.1.G	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.1.H	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
3la6.2.C	27.03	homo-octamer	HHblits	X-ray	3.20Å	0.30	0.08	Tyrosine-protein kinase wzc
4jlv.1.A	21.62	monomer	HHblits	X-ray	2.20Å	0.30	0.08	C-terminal fragment of Membrane protein CapA1, Putative uncharacterized protein capB1
2ved.1.A	18.92	homo-octamer	HHblits	X-ray	2.60Å	0.29	0.08	MEMBRANE PROTEIN CAPA1, PROTEIN TYROSINE KINASE
3k9h.1.A	25.71	homo-dimer	HHblits	X-ray	2.25Å	0.31	0.08	PF-32 protein
3k9g.1.A	25.71	homo-dimer	HHblits	X-ray	2.25Å	0.31	0.08	PF-32 protein
5j1j.1.A	32.35	homo-dimer	HHblits	X-ray	1.55Å	0.33	0.07	Site-determining protein
5j1j.1.B	32.35	homo-dimer	HHblits	X-ray	1.55Å	0.33	0.07	Site-determining protein
5jvf.1.A	32.35	monomer	HHblits	X-ray	1.66Å	0.33	0.07	Site-determining protein
3do6.1.A	29.41	homo-tetramer	HHblits	X-ray	1.85Å	0.32	0.07	Formate--tetrahydrofolate ligase
5a4j.1.A	26.47	homo-dimer	HHblits	X-ray	2.15Å	0.31	0.07	FORMATE--TETRAHYDROFOLATE LIGASE
3ug7.1.A	27.27	homo-tetramer	HHblits	X-ray	2.90Å	0.33	0.07	arsenical pump-driving ATPase
3ug6.1.A	27.27	homo-tetramer	HHblits	X-ray	3.30Å	0.33	0.07	arsenical pump-driving ATPase
4rz3.1.A	26.47	homo-dimer	HHblits	X-ray	1.90Å	0.30	0.07	Site-determining protein
4rz3.1.B	26.47	homo-dimer	HHblits	X-ray	1.90Å	0.30	0.07	Site-determining protein
4v02.1.A	28.13	hetero-oligomer	HHblits	X-ray	2.70Å	0.33	0.07	SITE-DETERMINING PROTEIN
2xj9.1.A	21.21	homo-dimer	HHblits	X-ray	2.80Å	0.31	0.07	MIPZ
2xj9.1.B	21.21	homo-dimer	HHblits	X-ray	2.80Å	0.31	0.07	MIPZ
2oze.1.A	17.65	homo-dimer	HHblits	X-ray	1.83Å	0.28	0.07	Orf delta'
3ez6.1.A	21.21	homo-dimer	HHblits	X-ray	2.58Å	0.30	0.07	Plasmid partition protein A
3ez6.1.B	21.21	homo-dimer	HHblits	X-ray	2.58Å	0.30	0.07	Plasmid partition protein A
3ez2.1.B	21.21	homo-dimer	HHblits	X-ray	2.05Å	0.30	0.07	Plasmid partition protein A
1f48.1.A	27.27	monomer	HHblits	X-ray	2.30Å	0.29	0.07	ARSENITE-TRANSLOCATING ATPASE
4v03.1.A	25.00	homo-dimer	HHblits	X-ray	1.90Å	0.32	0.07	SITE-DETERMINING PROTEIN
3zq6.1.A	21.88	homo-dimer	HHblits	X-ray	2.11Å	0.31	0.07	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.1.B	21.88	homo-dimer	HHblits	X-ray	2.11Å	0.31	0.07	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.2.A	21.88	homo-dimer	HHblits	X-ray	2.11Å	0.31	0.07	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
3zq6.2.B	21.88	homo-dimer	HHblits	X-ray	2.11Å	0.31	0.07	PUTATIVE ARSENICAL PUMP-DRIVING ATPASE
2woo.1.A	31.25	homo-dimer	HHblits	X-ray	3.01Å	0.31	0.07	ATPASE GET3
2xit.1.A	21.88	homo-dimer	HHblits	X-ray	1.80Å	0.31	0.07	MIPZ
3pg5.1.A	29.03	monomer	HHblits	X-ray	3.30Å	0.33	0.07	Uncharacterized protein
3pg5.2.A	29.03	monomer	HHblits	X-ray	3.30Å	0.33	0.07	Uncharacterized protein
3pg5.3.A	29.03	monomer	HHblits	X-ray	3.30Å	0.33	0.07	Uncharacterized protein
3pg5.4.A	29.03	monomer	HHblits	X-ray	3.30Å	0.33	0.07	Uncharacterized protein
1xd9.1.A	25.81	homo-dimer	HHblits	X-ray	2.80Å	0.33	0.07	Nitrogenase iron protein 1
5u1j.1.A	25.81	homo-dimer	HHblits	X-ray	2.95Å	0.31	0.07	Uncharacterized protein
5u1j.1.B	25.81	homo-dimer	HHblits	X-ray	2.95Å	0.31	0.07	Uncharacterized protein
5u1j.2.A	25.81	homo-dimer	HHblits	X-ray	2.95Å	0.31	0.07	Uncharacterized protein
5u1j.2.B	25.81	homo-dimer	HHblits	X-ray	2.95Å	0.31	0.07	Uncharacterized protein
4ohv.1.A	34.48	monomer	HHblits	X-ray	2.30Å	0.36	0.06	Protein clpf-1
4pfs.1.A	30.00	monomer	HHblits	X-ray	2.30Å	0.33	0.07	Cobyrinic Acid a,c-diamide synthase
4pfs.2.A	30.00	monomer	HHblits	X-ray	2.30Å	0.33	0.07	Cobyrinic Acid a,c-diamide synthase
5if9.1.A	30.00	monomer	HHblits	X-ray	1.80Å	0.33	0.07	Cobyrinic Acid a,c-diamide synthase
2ax4.1.A	34.48	homo-dimer	HHblits	X-ray	2.50Å	0.34	0.06	Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 2
3c8u.1.A	35.71	monomer	HHblits	X-ray	1.95Å	0.36	0.06	Fructokinase
2yvu.1.A	40.74	homo-dimer	HHblits	X-ray	2.10Å	0.39	0.06	Probable adenylyl-sulfate kinase
2yvu.1.B	40.74	homo-dimer	HHblits	X-ray	2.10Å	0.39	0.06	Probable adenylyl-sulfate kinase
1a7j.1.A	37.04	monomer	HHblits	X-ray	2.50Å	0.39	0.06	PHOSPHORIBULOKINASE
2pey.1.A	34.48	homo-dimer	HHblits	X-ray	1.88Å	0.33	0.06	Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1 (PAPS synthetase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1)
2pey.1.B	34.48	homo-dimer	HHblits	X-ray	1.88Å	0.33	0.06	Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1 (PAPS synthetase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1)
2ofx.1.A	34.48	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.06	Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 1
2yof.1.A	24.14	monomer	HHblits	X-ray	1.82Å	0.33	0.06	THYMIDYLATE KINASE
2yof.3.A	24.14	monomer	HHblits	X-ray	1.82Å	0.33	0.06	THYMIDYLATE KINASE
2yog.1.A	24.14	monomer	HHblits	X-ray	1.50Å	0.33	0.06	THYMIDYLATE KINASE
2yog.2.A	24.14	monomer	HHblits	X-ray	1.50Å	0.33	0.06	THYMIDYLATE KINASE
2xx3.1.A	27.59	homo-dimer	HHblits	X-ray	2.00Å	0.32	0.06	THYMIDYLATE KINASE
4gmd.1.B	32.14	homo-dimer	HHblits	X-ray	1.98Å	0.35	0.06	Thymidylate kinase
4gmd.1.A	32.14	homo-dimer	HHblits	X-ray	1.98Å	0.35	0.06	Thymidylate kinase
4edh.1.A	32.14	homo-dimer	HHblits	X-ray	1.32Å	0.35	0.06	Thymidylate kinase
4e5u.1.A	32.14	homo-dimer	HHblits	X-ray	1.81Å	0.35	0.06	Thymidylate kinase
4e5u.1.B	32.14	homo-dimer	HHblits	X-ray	1.81Å	0.35	0.06	Thymidylate kinase
3kb1.1.A	31.03	homo-dimer	HHblits	X-ray	2.90Å	0.32	0.06	Nucleotide-binding protein
5l3r.1.A	35.71	hetero-oligomer	HHblits	X-ray	2.50Å	0.34	0.06	Signal recognition particle 54 kDa protein, chloroplastic
4ypn.1.A	21.43	monomer	HHblits	X-ray	2.07Å	0.34	0.06	Lon protease
3dm9.1.A	27.59	homo-hexamer	HHblits	X-ray	2.20Å	0.31	0.06	Signal recognition particle receptor
3e70.1.A	27.59	monomer	HHblits	X-ray	1.97Å	0.31	0.06	Signal recognition particle receptor
3dmd.1.F	27.59	homo-hexamer	HHblits	X-ray	2.21Å	0.31	0.06	Signal recognition particle receptor
3dmd.1.E	27.59	homo-hexamer	HHblits	X-ray	2.21Å	0.31	0.06	Signal recognition particle receptor
3fmi.1.A	35.71	homo-dimer	HHblits	X-ray	2.18Å	0.34	0.06	Dethiobiotin synthetase
3fmi.1.B	35.71	homo-dimer	HHblits	X-ray	2.18Å	0.34	0.06	Dethiobiotin synthetase
3fmf.2.A	35.71	homo-dimer	HHblits	X-ray	2.05Å	0.34	0.06	Dethiobiotin synthetase
2bek.1.A	31.03	homo-dimer	HHblits	X-ray	1.80Å	0.31	0.06	SEGREGATION PROTEIN
1wcv.1.A	31.03	homo-dimer	HHblits	X-ray	1.60Å	0.31	0.06	SEGREGATION PROTEIN
2bej.1.A	31.03	homo-dimer	HHblits	X-ray	2.10Å	0.31	0.06	SEGREGATION PROTEIN
5lnk.1.Y	24.14	hetero-oligomer	HHblits	EM	3.90Å	0.31	0.06	Mitochondrial complex I, 42 kDa subunit
3syn.2.A	32.14	hetero-oligomer	HHblits	X-ray	3.06Å	0.34	0.06	Flagellar biosynthesis protein flhF
2px0.1.B	32.14	homo-dimer	HHblits	X-ray	3.00Å	0.34	0.06	Flagellar biosynthesis protein flhF
2px0.3.B	32.14	homo-dimer	HHblits	X-ray	3.00Å	0.34	0.06	Flagellar biosynthesis protein flhF
2px0.4.A	32.14	homo-dimer	HHblits	X-ray	3.00Å	0.34	0.06	Flagellar biosynthesis protein flhF
2px3.1.A	32.14	homo-dimer	HHblits	X-ray	3.20Å	0.34	0.06	Flagellar biosynthesis protein flhF
2px0.1.A	32.14	homo-dimer	HHblits	X-ray	3.00Å	0.34	0.06	Flagellar biosynthesis protein flhF
3md0.1.A	27.59	homo-dimer	HHblits	X-ray	2.45Å	0.31	0.06	Arginine/ornithine transport system ATPase
1n25.1.A	23.33	homo-hexamer	HHblits	X-ray	2.80Å	0.28	0.07	Large T Antigen
2wwg.2.B	20.69	homo-dimer	HHblits	X-ray	2.40Å	0.31	0.06	THYMIDILATE KINASE, PUTATIVE
2wwg.2.A	20.69	homo-dimer	HHblits	X-ray	2.40Å	0.31	0.06	THYMIDILATE KINASE, PUTATIVE
5cb6.3.B	37.04	homo-dimer	HHblits	X-ray	2.79Å	0.36	0.06	Probable adenylyl-sulfate kinase
5cb6.2.B	37.04	homo-dimer	HHblits	X-ray	2.79Å	0.36	0.06	Probable adenylyl-sulfate kinase
3kjg.2.A	33.33	homo-dimer	HHblits	X-ray	2.30Å	0.36	0.06	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kjg.1.A	33.33	monomer	HHblits	X-ray	2.30Å	0.36	0.06	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kji.1.A	33.33	homo-dimer	HHblits	X-ray	2.13Å	0.36	0.06	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kji.2.A	33.33	homo-dimer	HHblits	X-ray	2.13Å	0.36	0.06	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kjh.1.A	33.33	homo-dimer	HHblits	X-ray	1.90Å	0.36	0.06	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
3kje.1.A	33.33	monomer	HHblits	X-ray	2.30Å	0.36	0.06	CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
2xxa.1.A	32.14	hetero-oligomer	HHblits	X-ray	3.94Å	0.33	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2xxa.2.A	32.14	hetero-oligomer	HHblits	X-ray	3.94Å	0.33	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
5gad.1.7	32.14	hetero-oligomer	HHblits	EM	NA	0.33	0.06	Signal recognition particle protein Ffh
4c7o.1.A	32.14	hetero-oligomer	HHblits	X-ray	2.60Å	0.33	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
4c7o.2.A	32.14	hetero-oligomer	HHblits	X-ray	2.60Å	0.33	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
5gaf.1.7	32.14	hetero-oligomer	HHblits	EM	NA	0.33	0.06	Signal recognition particle protein
3nxs.1.A	27.59	homo-dimer	HHblits	X-ray	2.30Å	0.31	0.06	LAO/AO transport system ATPase
1p9n.1.A	35.71	homo-dimer	HHblits	X-ray	2.80Å	0.33	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
1p9n.1.B	35.71	homo-dimer	HHblits	X-ray	2.80Å	0.33	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
1np6.1.A	35.71	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
1np6.1.B	35.71	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
3ndb.1.B	28.57	hetero-oligomer	HHblits	X-ray	3.00Å	0.33	0.06	Signal recognition 54 kDa protein
2v3c.1.B	28.57	hetero-oligomer	HHblits	X-ray	2.50Å	0.33	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
2v3c.2.B	28.57	hetero-oligomer	HHblits	X-ray	2.50Å	0.33	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
1e98.1.A	28.57	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.06	THYMIDYLATE KINASE
1nmy.1.A	28.57	monomer	HHblits	X-ray	1.60Å	0.33	0.06	similar to THYMIDYLATE KINASE (DTMP KINASE)
1e2e.1.A	28.57	homo-dimer	HHblits	X-ray	2.00Å	0.33	0.06	THYMIDYLATE KINASE
1e9c.1.A	28.57	homo-dimer	HHblits	X-ray	1.60Å	0.33	0.06	THYMIDYLATE KINASE
4bzq.1.A	28.57	homo-dimer	HHblits	X-ray	2.10Å	0.33	0.06	BIFUNCTIONAL ENZYME CYSN/CYSC
1xjc.1.A	20.69	monomer	HHblits	X-ray	2.10Å	0.30	0.06	MobB protein homolog
4rz2.1.A	20.00	monomer	HHblits	X-ray	2.80Å	0.27	0.07	Site-determining protein
2ph1.1.A	32.14	homo-dimer	HHblits	X-ray	2.70Å	0.33	0.06	Nucleotide-binding protein
3ez7.1.A	20.69	homo-dimer	HHblits	X-ray	2.92Å	0.30	0.06	Plasmid partition protein A
5l3v.1.A	28.57	monomer	HHblits	X-ray	2.30Å	0.32	0.06	Signal recognition particle 54 kDa protein
5l3v.2.A	28.57	monomer	HHblits	X-ray	2.30Å	0.32	0.06	Signal recognition particle 54 kDa protein
3kl4.1.A	28.57	hetero-oligomer	HHblits	X-ray	3.50Å	0.32	0.06	Signal recognition 54 kDa protein
3b9q.1.A	28.57	monomer	HHblits	X-ray	1.75Å	0.32	0.06	Chloroplast SRP receptor homolog, alpha subunit CPFTSY
2og2.1.A	28.57	monomer	HHblits	X-ray	2.00Å	0.32	0.06	Putative signal recognition particle receptor
2j7p.1.A	32.14	hetero-oligomer	HHblits	X-ray	1.97Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
3ng1.1.A	32.14	monomer	HHblits	X-ray	2.30Å	0.32	0.06	SIGNAL SEQUENCE RECOGNITION PROTEIN FFH
2cnw.1.A	32.14	hetero-oligomer	HHblits	X-ray	2.39Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2cnw.3.A	32.14	hetero-oligomer	HHblits	X-ray	2.39Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2xkv.1.A	32.14	hetero-oligomer	HHblits	EM	13.50Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1ffh.1.A	32.14	monomer	HHblits	X-ray	2.05Å	0.32	0.06	FFH
4nkr.1.A	33.33	homo-dimer	HHblits	X-ray	2.41Å	0.35	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.2.A	33.33	homo-dimer	HHblits	X-ray	2.41Å	0.35	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.2.B	33.33	homo-dimer	HHblits	X-ray	2.41Å	0.35	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.3.A	33.33	homo-dimer	HHblits	X-ray	2.41Å	0.35	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4nkr.3.B	33.33	homo-dimer	HHblits	X-ray	2.41Å	0.35	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4wop.1.A	37.04	homo-dimer	HHblits	X-ray	2.39Å	0.35	0.06	ATP-dependent dethiobiotin synthetase BioD
5l3s.1.B	20.69	hetero-oligomer	HHblits	X-ray	1.90Å	0.29	0.06	Signal recognition particle receptor FtsY
5l3s.2.B	20.69	hetero-oligomer	HHblits	X-ray	1.90Å	0.29	0.06	Signal recognition particle receptor FtsY
5l3s.3.B	20.69	hetero-oligomer	HHblits	X-ray	1.90Å	0.29	0.06	Signal recognition particle receptor FtsY
5l3s.4.B	20.69	hetero-oligomer	HHblits	X-ray	1.90Å	0.29	0.06	Signal recognition particle receptor FtsY
5nco.1.c	32.14	hetero-oligomer	HHblits	EM	4.80Å	0.32	0.06	Signal recognition particle receptor FtsY
2xxa.1.B	32.14	hetero-oligomer	HHblits	X-ray	3.94Å	0.32	0.06	SRP RECEPTOR FTSY
2qy9.1.A	32.14	monomer	HHblits	X-ray	1.90Å	0.32	0.06	Cell division protein ftsY
5gad.1.9	32.14	hetero-oligomer	HHblits	EM	NA	0.32	0.06	Signal recognition particle receptor FtsY
1fts.1.A	32.14	monomer	HHblits	X-ray	2.20Å	0.32	0.06	FTSY
5k5z.1.A	25.00	homo-dimer	HHblits	X-ray	2.37Å	0.32	0.06	ParA
5k5z.2.A	25.00	homo-dimer	HHblits	X-ray	2.37Å	0.32	0.06	ParA
5k5z.2.B	25.00	homo-dimer	HHblits	X-ray	2.37Å	0.32	0.06	ParA
2j37.1.G	28.57	hetero-oligomer	HHblits	EM	8.00Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN (SRP54)
5l3q.1.A	28.57	hetero-oligomer	HHblits	X-ray	3.20Å	0.32	0.06	Signal recognition particle 54 kDa protein
4ue5.1.D	28.57	hetero-oligomer	HHblits	EM	9.00Å	0.32	0.06	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN
3dm5.1.A	33.33	homo-tetramer	HHblits	X-ray	2.51Å	0.35	0.06	Signal recognition 54 kDa protein
5aun.1.B	25.00	hetero-oligomer	HHblits	X-ray	1.63Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.A	25.00	homo-dimer	HHblits	X-ray	2.10Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
5auq.3.A	25.00	homo-dimer	HHblits	X-ray	2.53Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.B	25.00	homo-dimer	HHblits	X-ray	2.10Å	0.32	0.06	ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3h86.2.A	29.63	homo-trimer	HHblits	X-ray	2.50Å	0.34	0.06	Adenylate kinase
3h86.1.B	29.63	homo-trimer	HHblits	X-ray	2.50Å	0.34	0.06	Adenylate kinase
3h86.1.C	29.63	homo-trimer	HHblits	X-ray	2.50Å	0.34	0.06	Adenylate kinase
3h86.1.A	29.63	homo-trimer	HHblits	X-ray	2.50Å	0.34	0.06	Adenylate kinase
5l3w.1.A	20.69	monomer	HHblits	X-ray	2.40Å	0.29	0.06	Signal recognition particle receptor FtsY
1j8m.1.A	25.00	monomer	HHblits	X-ray	2.00Å	0.31	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
5l3s.1.A	25.00	hetero-oligomer	HHblits	X-ray	1.90Å	0.31	0.06	Signal recognition particle 54 kDa protein
5l3s.4.A	25.00	hetero-oligomer	HHblits	X-ray	1.90Å	0.31	0.06	Signal recognition particle 54 kDa protein
4c7o.1.B	32.14	hetero-oligomer	HHblits	X-ray	2.60Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY
2ffh.1.A	28.57	monomer	HHblits	X-ray	3.20Å	0.31	0.06	PROTEIN (FFH)
1rj9.1.B	28.57	hetero-oligomer	HHblits	X-ray	1.90Å	0.31	0.06	Signal recognition particle protein
2ng1.1.A	28.57	monomer	HHblits	X-ray	2.02Å	0.31	0.06	SIGNAL SEQUENCE RECOGNITION PROTEIN FFH
2c03.1.A	28.57	monomer	HHblits	X-ray	1.24Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2c03.2.A	28.57	monomer	HHblits	X-ray	1.24Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1jpj.1.A	28.57	monomer	HHblits	X-ray	2.30Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1jpn.1.A	28.57	monomer	HHblits	X-ray	1.90Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1jpn.2.A	28.57	monomer	HHblits	X-ray	1.90Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1ls1.1.A	28.57	monomer	HHblits	X-ray	1.10Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j45.1.A	28.57	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j45.2.A	28.57	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j46.1.A	28.57	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2j46.2.A	28.57	monomer	HHblits	X-ray	1.14Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1o87.1.A	28.57	monomer	HHblits	X-ray	2.10Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
1o87.2.A	28.57	monomer	HHblits	X-ray	2.10Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2c04.1.A	28.57	monomer	HHblits	X-ray	1.15Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
2c04.2.A	28.57	monomer	HHblits	X-ray	1.15Å	0.31	0.06	SIGNAL RECOGNITION PARTICLE PROTEIN
4oyh.1.A	29.63	homo-dimer	HHblits	X-ray	2.41Å	0.34	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.2.A	29.63	homo-dimer	HHblits	X-ray	2.41Å	0.34	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.2.B	29.63	homo-dimer	HHblits	X-ray	2.41Å	0.34	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.3.A	29.63	homo-dimer	HHblits	X-ray	2.41Å	0.34	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
4oyh.3.B	29.63	homo-dimer	HHblits	X-ray	2.41Å	0.34	0.06	Molybdopterin-guanine dinucleotide biosynthesis protein B
5nco.1.9	33.33	hetero-oligomer	HHblits	EM	4.80Å	0.34	0.06	Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein
3ld9.1.A	33.33	homo-tetramer	HHblits	X-ray	2.15Å	0.34	0.06	Thymidylate kinase
3uxm.1.A	29.63	monomer	HHblits	X-ray	1.95Å	0.34	0.06	Thymidylate kinase
3uxm.2.A	29.63	monomer	HHblits	X-ray	1.95Å	0.34	0.06	Thymidylate kinase
3uwo.1.A	29.63	monomer	HHblits	X-ray	1.70Å	0.34	0.06	Thymidylate kinase
3uwk.1.A	29.63	monomer	HHblits	X-ray	1.91Å	0.34	0.06	Thymidylate kinase
3a4l.1.A	37.04	homo-dimer	HHblits	X-ray	1.80Å	0.34	0.06	L-seryl-tRNA(Sec) kinase
3a4l.1.B	37.04	homo-dimer	HHblits	X-ray	1.80Å	0.34	0.06	L-seryl-tRNA(Sec) kinase
3am1.1.C	37.04	homo-dimer	HHblits	X-ray	2.40Å	0.34	0.06	L-seryl-tRNA(Sec) kinase
1g3r.1.A	29.63	monomer	HHblits	X-ray	2.70Å	0.34	0.06	CELL DIVISION INHIBITOR
1rw4.1.A	25.00	homo-dimer	HHblits	X-ray	2.50Å	0.31	0.06	Nitrogenase iron protein 1
3fwy.1.A	21.43	homo-dimer	HHblits	X-ray	1.63Å	0.31	0.06	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
3fwy.1.B	21.43	homo-dimer	HHblits	X-ray	1.63Å	0.31	0.06	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
3fkq.1.A	17.24	homo-dimer	HHblits	X-ray	2.10Å	0.28	0.06	NtrC-like two-domain protein
1ion.1.A	29.63	monomer	HHblits	X-ray	2.30Å	0.34	0.06	PROBABLE CELL DIVISION INHIBITOR MIND
1dts.1.A	21.43	homo-dimer	HHblits	X-ray	1.65Å	0.31	0.06	DETHIOBIOTIN SYNTHETASE
2xj4.1.A	21.43	monomer	HHblits	X-ray	1.60Å	0.31	0.06	MIPZ
5u1g.1.A	29.63	hetero-oligomer	HHblits	X-ray	3.64Å	0.33	0.06	ParA
5u1g.2.B	29.63	hetero-oligomer	HHblits	X-ray	3.64Å	0.33	0.06	ParA
4e07.1.A	29.63	monomer	HHblits	X-ray	2.90Å	0.33	0.06	Plasmid partitioning protein ParF
4e09.1.A	29.63	homo-dimer	HHblits	X-ray	2.99Å	0.33	0.06	Plasmid partitioning protein ParF
4e03.1.A	29.63	monomer	HHblits	X-ray	2.45Å	0.33	0.06	Plasmid partitioning protein ParF
4e03.2.A	29.63	monomer	HHblits	X-ray	2.45Å	0.33	0.06	Plasmid partitioning protein ParF
4dzz.1.A	29.63	monomer	HHblits	X-ray	1.80Å	0.33	0.06	Plasmid partitioning protein ParF
4dzz.2.A	29.63	monomer	HHblits	X-ray	1.80Å	0.33	0.06	Plasmid partitioning protein ParF
4bzp.1.A	29.63	homo-dimer	HHblits	X-ray	1.47Å	0.33	0.06	BIFUNCTIONAL ENZYME CYSN/CYSC
1vma.1.A	25.00	monomer	HHblits	X-ray	1.60Å	0.30	0.06	cell division protein FtsY
5he9.1.A	17.86	hetero-oligomer	HHblits	X-ray	1.90Å	0.30	0.06	Helicase loader
5he8.2.B	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.2.A	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.6.B	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.3.B	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.3.A	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.6.A	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.5.A	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.5.B	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.1.A	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.4.A	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.4.B	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5he8.1.B	17.86	homo-dimer	HHblits	X-ray	2.60Å	0.30	0.06	Helicase loader
5xb5.1.A	38.46	homo-dimer	HHblits	X-ray	2.23Å	0.36	0.06	Thymidylate kinase
2pbr.1.B	38.46	homo-dimer	HHblits	X-ray	1.96Å	0.36	0.06	Thymidylate kinase
2pbr.1.A	38.46	homo-dimer	HHblits	X-ray	1.96Å	0.36	0.06	Thymidylate kinase
4s35.1.B	38.46	homo-dimer	HHblits	X-ray	1.55Å	0.36	0.06	Thymidylate kinase
5xb2.1.B	38.46	homo-dimer	HHblits	X-ray	2.16Å	0.36	0.06	Thymidylate kinase
5xbh.1.A	38.46	homo-dimer	HHblits	X-ray	2.23Å	0.36	0.06	Thymidylate kinase
1qzw.1.B	29.63	monomer	HHblits	X-ray	4.10Å	0.33	0.06	Signal recognition 54 kDa protein
1qzx.1.A	29.63	monomer	HHblits	X-ray	4.00Å	0.33	0.06	Signal recognition 54 kDa protein
4f7w.1.B	25.93	homo-dimer	HHblits	X-ray	2.10Å	0.33	0.06	Pantothenate kinase
4f7w.1.A	25.93	homo-dimer	HHblits	X-ray	2.10Å	0.33	0.06	Pantothenate kinase
4f7w.3.A	25.93	homo-dimer	HHblits	X-ray	2.10Å	0.33	0.06	Pantothenate kinase
4f7w.4.B	25.93	homo-dimer	HHblits	X-ray	2.10Å	0.33	0.06	Pantothenate kinase
4ne2.2.A	25.93	homo-dimer	HHblits	X-ray	1.90Å	0.33	0.06	Pantothenate kinase
4ak9.1.A	25.93	homo-dimer	HHblits	X-ray	1.80Å	0.33	0.06	CPFTSY
5l3r.1.B	29.63	hetero-oligomer	HHblits	X-ray	2.50Å	0.33	0.06	Cell division protein FtsY homolog, chloroplastic
1zu5.1.A	21.43	monomer	HHblits	X-ray	2.40Å	0.30	0.06	ftsY
1zu4.1.A	21.43	monomer	HHblits	X-ray	1.95Å	0.30	0.06	ftsY
1ki9.1.A	25.93	homo-trimer	HHblits	X-ray	2.76Å	0.33	0.06	adenylate kinase
1ki9.1.B	25.93	homo-trimer	HHblits	X-ray	2.76Å	0.33	0.06	adenylate kinase
1ki9.1.C	25.93	homo-trimer	HHblits	X-ray	2.76Å	0.33	0.06	adenylate kinase
2yhs.1.A	33.33	monomer	HHblits	X-ray	1.60Å	0.33	0.06	CELL DIVISION PROTEIN FTSY
1nks.1.C	34.62	homo-trimer	HHblits	X-ray	2.57Å	0.36	0.06	ADENYLATE KINASE
1nks.1.B	34.62	homo-trimer	HHblits	X-ray	2.57Å	0.36	0.06	ADENYLATE KINASE
1nks.1.A	34.62	homo-trimer	HHblits	X-ray	2.57Å	0.36	0.06	ADENYLATE KINASE
2w58.1.A	25.00	homo-dimer	HHblits	X-ray	2.50Å	0.30	0.06	PRIMOSOME COMPONENT (HELICASE LOADER)
2w58.1.B	25.00	homo-dimer	HHblits	X-ray	2.50Å	0.30	0.06	PRIMOSOME COMPONENT (HELICASE LOADER)
3jaj.45.A	29.63	monomer	HHblits	EM	NA	0.33	0.06	SRP54
3jan.45.A	29.63	monomer	HHblits	EM	NA	0.33	0.06	SRP54
4unq.1.A	34.62	monomer	HHblits	X-ray	2.30Å	0.35	0.06	THYMIDYLATE KINASE
4unq.2.A	34.62	monomer	HHblits	X-ray	2.30Å	0.35	0.06	THYMIDYLATE KINASE
4unp.1.A	34.62	monomer	HHblits	X-ray	2.30Å	0.35	0.06	THYMIDYLATE KINASE
4unn.1.A	34.62	monomer	HHblits	X-ray	2.50Å	0.35	0.06	THYMIDYLATE KINASE
2f1r.1.A	36.00	homo-dimer	HHblits	X-ray	2.10Å	0.38	0.05	molybdopterin-guanine dinucleotide biosynthesis protein B (mobB)
2f1r.1.B	36.00	homo-dimer	HHblits	X-ray	2.10Å	0.38	0.05	molybdopterin-guanine dinucleotide biosynthesis protein B (mobB)
3n2i.1.A	18.52	homo-dimer	HHblits	X-ray	2.25Å	0.32	0.06	Thymidylate kinase
3r9i.1.B	25.93	hetero-oligomer	HHblits	X-ray	2.60Å	0.32	0.06	Septum site-determining protein minD
3q9l.1.A	25.93	homo-dimer	HHblits	X-ray	2.34Å	0.32	0.06	Septum site-determining protein minD
3of5.1.A	21.43	homo-dimer	HHblits	X-ray	1.52Å	0.29	0.06	Dethiobiotin synthetase
2ofw.1.B	33.33	homo-dimer	HHblits	X-ray	2.05Å	0.32	0.06	APS kinase domain of the PAPS synthetase 1
2ofw.1.A	33.33	homo-dimer	HHblits	X-ray	2.05Å	0.32	0.06	APS kinase domain of the PAPS synthetase 1
4wzb.1.F	25.93	hetero-oligomer	HHblits	X-ray	2.30Å	0.32	0.06	Nitrogenase iron protein 1
4wzb.1.E	25.93	hetero-oligomer	HHblits	X-ray	2.30Å	0.32	0.06	Nitrogenase iron protein 1
1g20.1.E	25.93	hetero-oligomer	HHblits	X-ray	2.20Å	0.32	0.06	NITROGENASE IRON PROTEIN
1g21.1.H	25.93	hetero-oligomer	HHblits	X-ray	3.00Å	0.32	0.06	NITROGENASE IRON PROTEIN
1g21.1.E	25.93	hetero-oligomer	HHblits	X-ray	3.00Å	0.32	0.06	NITROGENASE IRON PROTEIN
2i3b.1.A	26.92	monomer	HHblits	NMR	NA	0.35	0.06	Human Cancer-Related NTPase
1kht.1.A	26.92	homo-trimer	HHblits	X-ray	2.50Å	0.34	0.06	adenylate kinase
1kht.1.B	26.92	homo-trimer	HHblits	X-ray	2.50Å	0.34	0.06	adenylate kinase
1kht.1.C	26.92	homo-trimer	HHblits	X-ray	2.50Å	0.34	0.06	adenylate kinase
3avo.1.A	22.22	homo-dimer	HHblits	X-ray	2.55Å	0.31	0.06	Pantothenate kinase
3hjn.1.A	30.77	homo-dimer	HHblits	X-ray	2.10Å	0.34	0.06	Thymidylate kinase
3hjn.1.B	30.77	homo-dimer	HHblits	X-ray	2.10Å	0.34	0.06	Thymidylate kinase
2plr.1.A	30.77	homo-dimer	HHblits	X-ray	1.60Å	0.34	0.06	Probable thymidylate kinase
2plr.1.B	30.77	homo-dimer	HHblits	X-ray	1.60Å	0.34	0.06	Probable thymidylate kinase
4rzu.1.A	30.77	homo-dimer	HHblits	X-ray	2.80Å	0.34	0.06	Probable thymidylate kinase
4rzu.1.B	30.77	homo-dimer	HHblits	X-ray	2.80Å	0.34	0.06	Probable thymidylate kinase
4rzx.1.B	30.77	homo-dimer	HHblits	X-ray	2.30Å	0.34	0.06	Probable thymidylate kinase
1j8y.1.A	22.22	monomer	HHblits	X-ray	2.00Å	0.31	0.06	SIGNAL RECOGNITION 54 KDA PROTEIN
2ynm.1.A	22.22	hetero-oligomer	HHblits	X-ray	2.10Å	0.31	0.06	LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN
1dah.1.A	22.22	homo-dimer	HHblits	X-ray	1.64Å	0.31	0.06	DETHIOBIOTIN SYNTHETASE
1byi.1.A	22.22	homo-dimer	HHblits	X-ray	0.97Å	0.31	0.06	DETHIOBIOTIN SYNTHASE
3tqc.1.A	26.92	homo-dimer	HHblits	X-ray	2.30Å	0.34	0.06	Pantothenate kinase
1sq5.1.A	26.92	homo-dimer	HHblits	X-ray	2.20Å	0.34	0.06	Pantothenate kinase
1esm.1.A	26.92	homo-dimer	HHblits	X-ray	2.50Å	0.34	0.06	PANTOTHENATE KINASE
1esm.1.B	26.92	homo-dimer	HHblits	X-ray	2.50Å	0.34	0.06	PANTOTHENATE KINASE
1esn.1.A	26.92	homo-dimer	HHblits	X-ray	2.60Å	0.34	0.06	PANTOTHENATE KINASE
1esn.1.B	26.92	homo-dimer	HHblits	X-ray	2.60Å	0.34	0.06	PANTOTHENATE KINASE
1esn.2.B	26.92	homo-dimer	HHblits	X-ray	2.60Å	0.34	0.06	PANTOTHENATE KINASE
1zp6.1.A	32.00	homo-dimer	HHblits	X-ray	3.20Å	0.37	0.05	hypothetical protein Atu3015
1hyq.1.A	22.22	monomer	HHblits	X-ray	2.60Å	0.30	0.06	CELL DIVISION INHIBITOR (MIND-1)
5l3q.1.B	17.86	hetero-oligomer	HHblits	X-ray	3.20Å	0.27	0.06	Signal recognition particle receptor subunit alpha
2g0t.1.A	17.86	homo-dimer	HHblits	X-ray	2.67Å	0.27	0.06	conserved hypothetical protein
1y63.1.A	41.67	monomer	HHblits	X-ray	1.70Å	0.39	0.05	Lmaj004144AAA protein
3mle.1.A	23.08	homo-dimer	HHblits	X-ray	2.80Å	0.33	0.06	Dethiobiotin synthetase
1xrj.1.A	26.92	homo-tetramer	HHblits	X-ray	2.00Å	0.33	0.06	Uridine-cytidine kinase 2
1ufq.1.A	26.92	homo-tetramer	HHblits	X-ray	2.50Å	0.33	0.06	Uridine-cytidine kinase 2
1uej.1.A	26.92	monomer	HHblits	X-ray	2.61Å	0.33	0.06	Uridine-cytidine kinase 2
1ufq.1.B	26.92	homo-tetramer	HHblits	X-ray	2.50Å	0.33	0.06	Uridine-cytidine kinase 2
1uj2.1.A	26.92	homo-tetramer	HHblits	X-ray	1.80Å	0.33	0.06	Uridine-cytidine kinase 2
1htw.1.A	19.23	monomer	HHblits	X-ray	1.70Å	0.32	0.06	HI0065
1htw.2.A	19.23	monomer	HHblits	X-ray	1.70Å	0.32	0.06	HI0065
1htw.3.A	19.23	monomer	HHblits	X-ray	1.70Å	0.32	0.06	HI0065
1odf.1.A	14.81	monomer	HHblits	X-ray	2.25Å	0.29	0.06	HYPOTHETICAL 33.3 KDA PROTEIN IN ADE3-SER2 INTERGENIC REGION
2cnw.1.B	23.08	hetero-oligomer	HHblits	X-ray	2.39Å	0.32	0.06	CELL DIVISION PROTEIN FTSY
2iyl.1.A	23.08	monomer	HHblits	X-ray	2.10Å	0.32	0.06	CELL DIVISION PROTEIN FTSY
2cnw.2.B	23.08	hetero-oligomer	HHblits	X-ray	2.39Å	0.32	0.06	CELL DIVISION PROTEIN FTSY
2j7p.1.B	23.08	hetero-oligomer	HHblits	X-ray	1.97Å	0.32	0.06	CELL DIVISION PROTEIN FTSY
3ea0.1.A	10.71	homo-dimer	HHblits	X-ray	2.20Å	0.25	0.06	ATPase, ParA family
3ea0.1.B	10.71	homo-dimer	HHblits	X-ray	2.20Å	0.25	0.06	ATPase, ParA family
3ez9.1.A	26.92	homo-dimer	HHblits	X-ray	2.80Å	0.31	0.06	ParA
3ez9.2.A	26.92	homo-dimer	HHblits	X-ray	2.80Å	0.31	0.06	ParA
3ezf.1.A	26.92	homo-dimer	HHblits	X-ray	2.80Å	0.31	0.06	ParA
1f48.1.A	26.92	monomer	HHblits	X-ray	2.30Å	0.31	0.06	ARSENITE-TRANSLOCATING ATPASE
3sqk.1.A	23.08	monomer	HHblits	X-ray	2.45Å	0.31	0.06	Guanylate kinase
3sqk.2.A	23.08	monomer	HHblits	X-ray	2.45Å	0.31	0.06	Guanylate kinase
4f4j.1.A	23.08	homo-dimer	HHblits	X-ray	2.45Å	0.31	0.06	Guanylate kinase
4f4j.1.B	23.08	homo-dimer	HHblits	X-ray	2.45Å	0.31	0.06	Guanylate kinase
4cvn.1.A	47.83	hetero-oligomer	HHblits	X-ray	2.12Å	0.40	0.05	PUTATIVE ADENYLATE KINASE
1kdo.1.A	29.17	monomer	HHblits	X-ray	1.90Å	0.36	0.05	CYTIDYLATE KINASE
1kdo.2.A	29.17	monomer	HHblits	X-ray	1.90Å	0.36	0.05	CYTIDYLATE KINASE
1kdt.1.A	29.17	monomer	HHblits	X-ray	1.95Å	0.36	0.05	CYTIDYLATE KINASE
1kdt.2.A	29.17	monomer	HHblits	X-ray	1.95Å	0.36	0.05	CYTIDYLATE KINASE
1kdp.2.A	29.17	monomer	HHblits	X-ray	2.30Å	0.36	0.05	CYTIDYLATE KINASE
1kdr.1.A	29.17	monomer	HHblits	X-ray	2.25Å	0.36	0.05	CYTIDYLATE KINASE
1kdr.2.A	29.17	monomer	HHblits	X-ray	2.25Å	0.36	0.05	CYTIDYLATE KINASE
2cmk.1.A	29.17	monomer	HHblits	X-ray	2.00Å	0.36	0.05	PROTEIN (CYTIDINE MONOPHOSPHATE KINASE)
2uvq.1.A	28.00	homo-tetramer	HHblits	X-ray	3.00Å	0.33	0.05	URIDINE-CYTIDINE KINASE 1
1fl9.1.A	20.00	monomer	HHblits	X-ray	2.50Å	0.33	0.05	HYPOTHETICAL PROTEIN HI0065
1fl9.2.A	20.00	monomer	HHblits	X-ray	2.50Å	0.33	0.05	HYPOTHETICAL PROTEIN HI0065
1fl9.3.A	20.00	monomer	HHblits	X-ray	2.50Å	0.33	0.05	HYPOTHETICAL PROTEIN HI0065
1we2.1.A	43.48	monomer	HHblits	X-ray	2.30Å	0.39	0.05	Shikimate kinase
1zyu.1.A	43.48	monomer	HHblits	X-ray	2.90Å	0.39	0.05	Shikimate kinase
3baf.1.A	43.48	monomer	HHblits	X-ray	2.25Å	0.39	0.05	Shikimate kinase
2g1j.1.A	43.48	monomer	HHblits	X-ray	2.00Å	0.39	0.05	Shikimate kinase
2g1j.2.A	43.48	monomer	HHblits	X-ray	2.00Å	0.39	0.05	Shikimate kinase
2dfn.1.A	43.48	monomer	HHblits	X-ray	1.93Å	0.39	0.05	Shikimate kinase
2dft.1.A	43.48	homo-tetramer	HHblits	X-ray	2.80Å	0.39	0.05	Shikimate kinase
2dft.1.B	43.48	homo-tetramer	HHblits	X-ray	2.80Å	0.39	0.05	Shikimate kinase
2dft.1.C	43.48	homo-tetramer	HHblits	X-ray	2.80Å	0.39	0.05	Shikimate kinase
4bqs.2.A	43.48	monomer	HHblits	X-ray	2.15Å	0.39	0.05	SHIKIMATE KINASE
4bqs.3.A	43.48	monomer	HHblits	X-ray	2.15Å	0.39	0.05	SHIKIMATE KINASE
2iys.1.A	43.48	monomer	HHblits	X-ray	1.40Å	0.39	0.05	SHIKIMATE KINASE
2iyv.1.A	43.48	monomer	HHblits	X-ray	1.35Å	0.39	0.05	SHIKIMATE KINASE
2iyx.1.A	43.48	monomer	HHblits	X-ray	1.49Å	0.39	0.05	SHIKIMATE KINASE
2iyq.1.A	43.48	monomer	HHblits	X-ray	1.80Å	0.39	0.05	SHIKIMATE KINASE
2iyr.1.A	43.48	monomer	HHblits	X-ray	1.98Å	0.39	0.05	SHIKIMATE KINASE
2iyr.2.A	43.48	monomer	HHblits	X-ray	1.98Å	0.39	0.05	SHIKIMATE KINASE
4rfv.1.A	28.00	homo-dimer	HHblits	X-ray	1.69Å	0.33	0.05	Bifunctional enzyme CysN/CysC
2qmo.1.A	24.00	homo-dimer	HHblits	X-ray	1.47Å	0.32	0.05	Dethiobiotin synthetase
1okk.1.B	24.00	hetero-oligomer	HHblits	X-ray	2.05Å	0.32	0.05	CELL DIVISION PROTEIN FTSY
2xkv.1.D	24.00	hetero-oligomer	HHblits	EM	13.50Å	0.32	0.05	CELL DIVISION PROTEIN FTSY
1rj9.1.A	24.00	hetero-oligomer	HHblits	X-ray	1.90Å	0.32	0.05	Signal Recognition Protein
2q9a.1.A	24.00	monomer	HHblits	X-ray	2.24Å	0.32	0.05	Cell division protein ftsY
2q9a.2.A	24.00	monomer	HHblits	X-ray	2.24Å	0.32	0.05	Cell division protein ftsY
1kim.1.A	24.00	homo-dimer	HHblits	X-ray	2.14Å	0.32	0.05	THYMIDINE KINASE
1z6g.1.A	23.08	monomer	HHblits	X-ray	2.18Å	0.29	0.06	guanylate kinase
4y0a.1.A	43.48	monomer	HHblits	X-ray	1.91Å	0.38	0.05	Shikimate kinase
2rhm.1.A	43.48	homo-dimer	HHblits	X-ray	1.70Å	0.38	0.05	Putative kinase
1q3t.1.A	33.33	monomer	HHblits	NMR	NA	0.35	0.05	Cytidylate kinase
3r20.1.A	33.33	monomer	HHblits	X-ray	2.00Å	0.34	0.05	Cytidylate kinase
2qsy.1.A	33.33	monomer	HHblits	X-ray	1.95Å	0.34	0.05	Nicotinamide riboside kinase 1
2qt0.1.A	33.33	monomer	HHblits	X-ray	1.92Å	0.34	0.05	Nicotinamide riboside kinase 1
2bdt.1.A	39.13	homo-dimer	HHblits	X-ray	2.40Å	0.37	0.05	BH3686
3iim.1.A	43.48	monomer	HHblits	X-ray	2.00Å	0.37	0.05	Coilin-interacting nuclear ATPase protein
5jzv.1.A	43.48	monomer	HHblits	X-ray	2.07Å	0.37	0.05	Adenylate kinase isoenzyme 6
2fem.1.A	30.43	monomer	HHblits	X-ray	1.90Å	0.37	0.05	Cytidylate kinase
2feo.1.A	30.43	monomer	HHblits	X-ray	2.80Å	0.37	0.05	Cytidylate kinase
1cke.1.A	30.43	monomer	HHblits	X-ray	1.75Å	0.37	0.05	PROTEIN (CYTIDINE MONOPHOSPHATE KINASE)
1via.1.A	33.33	homo-dimer	HHblits	X-ray	1.57Å	0.33	0.05	shikimate kinase
4e22.1.A	34.78	monomer	HHblits	X-ray	2.32Å	0.36	0.05	Cytidylate kinase
2ar7.1.A	33.33	monomer	HHblits	X-ray	2.15Å	0.33	0.05	Adenylate kinase 4
2ar7.2.A	33.33	monomer	HHblits	X-ray	2.15Å	0.33	0.05	Adenylate kinase 4
2bbw.1.A	33.33	monomer	HHblits	X-ray	2.05Å	0.33	0.05	adenylate kinase 4, AK4
2bbw.2.A	33.33	monomer	HHblits	X-ray	2.05Å	0.33	0.05	adenylate kinase 4, AK4
2vli.1.A	29.17	homo-dimer	HHblits	X-ray	1.95Å	0.32	0.05	ANTIBIOTIC RESISTANCE PROTEIN
2vli.2.A	29.17	homo-dimer	HHblits	X-ray	1.95Å	0.32	0.05	ANTIBIOTIC RESISTANCE PROTEIN
4i1v.1.A	40.91	homo-dimer	HHblits	X-ray	2.60Å	0.39	0.05	Dephospho-CoA kinase
4i1u.1.B	40.91	homo-dimer	HHblits	X-ray	2.05Å	0.39	0.05	Dephospho-CoA kinase
4i1u.1.A	40.91	homo-dimer	HHblits	X-ray	2.05Å	0.39	0.05	Dephospho-CoA kinase
1kgd.1.A	16.00	monomer	HHblits	X-ray	1.31Å	0.29	0.05	PERIPHERAL PLASMA MEMBRANE CASK
3adk.1.A	25.00	monomer	HHblits	X-ray	2.10Å	0.32	0.05	ADENYLATE KINASE
3umf.1.A	29.17	monomer	HHblits	X-ray	2.05Å	0.32	0.05	Adenylate kinase
3hr7.1.A	25.00	homo-dimer	HHblits	X-ray	1.80Å	0.32	0.05	Shikimate kinase
3hr7.1.B	25.00	homo-dimer	HHblits	X-ray	1.80Å	0.32	0.05	Shikimate kinase
1zui.1.A	25.00	monomer	HHblits	X-ray	2.30Å	0.32	0.05	Shikimate kinase
1zuh.1.A	25.00	monomer	HHblits	X-ray	1.80Å	0.32	0.05	Shikimate kinase
3muf.1.A	25.00	monomer	HHblits	X-ray	2.30Å	0.32	0.05	Shikimate kinase
4loa.1.A	34.78	homo-dimer	HHblits	X-ray	1.82Å	0.34	0.05	De-novo design amidase
4loa.1.B	34.78	homo-dimer	HHblits	X-ray	1.82Å	0.34	0.05	De-novo design amidase
2qg6.1.A	34.78	monomer	HHblits	X-ray	1.50Å	0.34	0.05	Nicotinamide riboside kinase 1
2bwj.1.A	29.17	homo-dimer	HHblits	X-ray	2.30Å	0.31	0.05	ADENYLATE KINASE 5
2bwj.1.B	29.17	homo-dimer	HHblits	X-ray	2.30Å	0.31	0.05	ADENYLATE KINASE 5
2bwj.2.B	29.17	homo-dimer	HHblits	X-ray	2.30Å	0.31	0.05	ADENYLATE KINASE 5
1z83.1.A	25.00	homo-dimer	HHblits	X-ray	1.90Å	0.31	0.05	Adenylate kinase 1
2c95.1.A	25.00	monomer	HHblits	X-ray	1.71Å	0.31	0.05	ADENYLATE KINASE 1
4ly6.1.A	16.67	homo-hexamer	HHblits	X-ray	3.60Å	0.31	0.05	Transcriptional regulator (NtrC family)
4ly6.1.B	16.67	homo-hexamer	HHblits	X-ray	3.60Å	0.31	0.05	Transcriptional regulator (NtrC family)
4ly6.1.C	16.67	homo-hexamer	HHblits	X-ray	3.60Å	0.31	0.05	Transcriptional regulator (NtrC family)
4ly6.1.D	16.67	homo-hexamer	HHblits	X-ray	3.60Å	0.31	0.05	Transcriptional regulator (NtrC family)
4ly6.1.E	16.67	homo-hexamer	HHblits	X-ray	3.60Å	0.31	0.05	Transcriptional regulator (NtrC family)
4ly6.1.F	16.67	homo-hexamer	HHblits	X-ray	3.60Å	0.31	0.05	Transcriptional regulator (NtrC family)
4ly6.2.F	16.67	homo-hexamer	HHblits	X-ray	3.60Å	0.31	0.05	Transcriptional regulator (NtrC family)
4lzz.1.A	16.67	homo-hexamer	HHblits	X-ray	3.21Å	0.31	0.05	Transcriptional regulator (NtrC family)
4lzz.1.B	16.67	homo-hexamer	HHblits	X-ray	3.21Å	0.31	0.05	Transcriptional regulator (NtrC family)
4lzz.1.C	16.67	homo-hexamer	HHblits	X-ray	3.21Å	0.31	0.05	Transcriptional regulator (NtrC family)
4lzz.1.D	16.67	homo-hexamer	HHblits	X-ray	3.21Å	0.31	0.05	Transcriptional regulator (NtrC family)
4lzz.1.E	16.67	homo-hexamer	HHblits	X-ray	3.21Å	0.31	0.05	Transcriptional regulator (NtrC family)
4lzz.1.F	16.67	homo-hexamer	HHblits	X-ray	3.21Å	0.31	0.05	Transcriptional regulator (NtrC family)
4lzz.3.F	16.67	homo-hexamer	HHblits	X-ray	3.21Å	0.31	0.05	Transcriptional regulator (NtrC family)
1ko5.1.A	30.43	homo-dimer	HHblits	X-ray	2.28Å	0.34	0.05	Gluconate kinase
1knq.1.B	30.43	homo-dimer	HHblits	X-ray	2.00Å	0.34	0.05	Gluconate kinase
1ko8.1.A	30.43	homo-dimer	HHblits	X-ray	2.40Å	0.34	0.05	Gluconate kinase
1ko8.1.B	30.43	homo-dimer	HHblits	X-ray	2.40Å	0.34	0.05	Gluconate kinase
1ko1.1.B	30.43	homo-dimer	HHblits	X-ray	2.09Å	0.34	0.05	Gluconate kinase
1knq.1.A	30.43	homo-dimer	HHblits	X-ray	2.00Å	0.34	0.05	Gluconate kinase
3cm0.1.A	34.78	monomer	HHblits	X-ray	1.80Å	0.34	0.05	Adenylate kinase
1e6c.1.A	39.13	monomer	HHblits	X-ray	1.80Å	0.34	0.05	SHIKIMATE KINASE
3vaa.1.A	34.78	monomer	HHblits	X-ray	1.70Å	0.34	0.05	Shikimate kinase
3vaa.2.A	34.78	monomer	HHblits	X-ray	1.70Å	0.34	0.05	Shikimate kinase
3vaa.3.A	34.78	monomer	HHblits	X-ray	1.70Å	0.34	0.05	Shikimate kinase
3ibg.1.A	33.33	homo-dimer	HHblits	X-ray	3.20Å	0.31	0.05	ATPase, subunit of the Get complex
3mrs.1.A	20.83	monomer	HHblits	X-ray	2.40Å	0.31	0.05	Shikimate kinase
3t61.1.A	30.43	homo-dimer	HHblits	X-ray	2.20Å	0.34	0.05	Gluconokinase
1zd8.1.A	30.43	monomer	HHblits	X-ray	1.48Å	0.33	0.05	GTP:AMP phosphotransferase mitochondrial
1uky.1.A	25.00	monomer	HHblits	X-ray	2.13Å	0.30	0.05	URIDYLATE KINASE
2shk.1.A	45.45	homo-dimer	HHblits	X-ray	2.60Å	0.37	0.05	SHIKIMATE KINASE
2shk.1.B	45.45	homo-dimer	HHblits	X-ray	2.60Å	0.37	0.05	SHIKIMATE KINASE
4eun.1.A	30.43	homo-dimer	HHblits	X-ray	1.60Å	0.33	0.05	thermoresistant glucokinase
3n2e.1.A	26.09	monomer	HHblits	X-ray	2.53Å	0.33	0.05	Shikimate kinase
2h92.1.A	36.36	monomer	HHblits	X-ray	2.30Å	0.36	0.05	Cytidylate kinase
3ake.1.A	31.82	monomer	HHblits	X-ray	1.50Å	0.36	0.05	Cytidylate kinase
3akc.1.A	31.82	monomer	HHblits	X-ray	1.65Å	0.36	0.05	Cytidylate kinase
3w8n.1.A	31.82	monomer	HHblits	X-ray	2.20Å	0.36	0.05	Cytidylate kinase
3w90.1.A	31.82	monomer	HHblits	X-ray	1.65Å	0.36	0.05	Cytidylate kinase
3ney.2.A	26.09	monomer	HHblits	X-ray	2.26Å	0.33	0.05	55 kDa erythrocyte membrane protein
3ney.1.A	26.09	monomer	HHblits	X-ray	2.26Å	0.33	0.05	55 kDa erythrocyte membrane protein
1cp2.1.A	30.43	homo-dimer	HHblits	X-ray	1.93Å	0.32	0.05	NITROGENASE IRON PROTEIN
1cp2.1.B	30.43	homo-dimer	HHblits	X-ray	1.93Å	0.32	0.05	NITROGENASE IRON PROTEIN
3trf.1.A	31.82	homo-dimer	HHblits	X-ray	2.60Å	0.36	0.05	Shikimate kinase
1xdb.1.A	26.09	homo-dimer	HHblits	X-ray	2.80Å	0.32	0.05	Nitrogenase iron protein 1
1de0.1.A	26.09	homo-dimer	HHblits	X-ray	2.40Å	0.32	0.05	NITROGENASE IRON PROTEIN
1xcp.1.A	26.09	homo-dimer	HHblits	X-ray	3.20Å	0.32	0.05	Nitrogenase iron protein 1
1xcp.2.A	26.09	homo-dimer	HHblits	X-ray	3.20Å	0.32	0.05	Nitrogenase iron protein 1
4wza.1.E	26.09	hetero-oligomer	HHblits	X-ray	1.90Å	0.32	0.05	Nitrogenase iron protein 1
4wza.1.F	26.09	hetero-oligomer	HHblits	X-ray	1.90Å	0.32	0.05	Nitrogenase iron protein 1
1m34.1.E	26.09	hetero-oligomer	HHblits	X-ray	2.30Å	0.32	0.05	Nitrogenase Iron Protein 1
1m1y.1.E	26.09	hetero-oligomer	HHblits	X-ray	3.20Å	0.32	0.05	nitrogenase IRON protein 1
1m1y.1.F	26.09	hetero-oligomer	HHblits	X-ray	3.20Å	0.32	0.05	nitrogenase IRON protein 1
2afi.1.E	26.09	hetero-oligomer	HHblits	X-ray	3.10Å	0.32	0.05	Nitrogenase iron protein 1
2afh.1.E	26.09	hetero-oligomer	HHblits	X-ray	2.10Å	0.32	0.05	Nitrogenase iron protein 1
2afh.1.F	26.09	hetero-oligomer	HHblits	X-ray	2.10Å	0.32	0.05	Nitrogenase iron protein 1
1g5p.1.A	26.09	homo-dimer	HHblits	X-ray	2.20Å	0.32	0.05	NITROGENASE IRON PROTEIN
1g5p.1.B	26.09	homo-dimer	HHblits	X-ray	2.20Å	0.32	0.05	NITROGENASE IRON PROTEIN
1g1m.1.A	26.09	homo-dimer	HHblits	X-ray	2.25Å	0.32	0.05	NITROGENASE IRON PROTEIN
1g1m.1.B	26.09	homo-dimer	HHblits	X-ray	2.25Å	0.32	0.05	NITROGENASE IRON PROTEIN
1fp6.1.A	26.09	homo-dimer	HHblits	X-ray	2.15Å	0.32	0.05	NITROGENASE IRON PROTEIN
1nip.1.A	26.09	homo-dimer	HHblits	X-ray	2.90Å	0.32	0.05	NITROGENASE IRON PROTEIN
1nip.1.B	26.09	homo-dimer	HHblits	X-ray	2.90Å	0.32	0.05	NITROGENASE IRON PROTEIN
2c8v.1.A	26.09	monomer	HHblits	X-ray	2.50Å	0.32	0.05	NITROGENASE IRON PROTEIN 1
2cdn.1.A	30.43	monomer	HHblits	X-ray	1.90Å	0.31	0.05	ADENYLATE KINASE
2grj.1.A	38.10	monomer	HHblits	X-ray	2.60Å	0.38	0.05	Dephospho-CoA kinase
2pt5.2.A	38.10	monomer	HHblits	X-ray	2.10Å	0.37	0.05	Shikimate kinase
2pt5.1.A	38.10	monomer	HHblits	X-ray	2.10Å	0.37	0.05	Shikimate kinase
2pt5.3.A	38.10	monomer	HHblits	X-ray	2.10Å	0.37	0.05	Shikimate kinase
2pt5.4.A	38.10	monomer	HHblits	X-ray	2.10Å	0.37	0.05	Shikimate kinase
1zak.1.A	27.27	homo-dimer	HHblits	X-ray	3.50Å	0.33	0.05	ADENYLATE KINASE
3hdt.1.A	26.09	homo-dimer	HHblits	X-ray	2.79Å	0.29	0.05	putative kinase
3hdt.1.B	26.09	homo-dimer	HHblits	X-ray	2.79Å	0.29	0.05	putative kinase
2ukd.1.A	21.74	monomer	HHblits	X-ray	2.20Å	0.29	0.05	URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE
1uke.1.A	21.74	monomer	HHblits	X-ray	2.20Å	0.29	0.05	URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE
3iqx.1.A	36.36	homo-dimer	HHblits	X-ray	3.50Å	0.32	0.05	Tail-anchored protein targeting factor Get3
4np6.1.A	18.18	homo-dimer	HHblits	X-ray	2.00Å	0.31	0.05	Adenylate kinase
4np6.1.B	18.18	homo-dimer	HHblits	X-ray	2.00Å	0.31	0.05	Adenylate kinase
3gmt.1.A	18.18	monomer	HHblits	X-ray	2.10Å	0.30	0.05	Adenylate kinase
3gmt.2.A	18.18	monomer	HHblits	X-ray	2.10Å	0.30	0.05	Adenylate kinase
3fdi.1.A	27.27	homo-tetramer	HHblits	X-ray	2.20Å	0.30	0.05	uncharacterized protein
3r8c.1.A	40.00	homo-dimer	HHblits	X-ray	2.20Å	0.37	0.04	Cytidylate kinase
2aky.1.A	22.73	monomer	HHblits	X-ray	1.96Å	0.29	0.05	ADENYLATE KINASE
3aky.1.A	22.73	monomer	HHblits	X-ray	2.23Å	0.29	0.05	ADENYLATE KINASE
1p4s.1.A	33.33	monomer	HHblits	NMR	NA	0.33	0.05	Adenylate kinase
4w5j.3.A	18.18	monomer	HHblits	X-ray	1.65Å	0.28	0.05	Adenylate kinase
4ntz.1.A	18.18	monomer	HHblits	X-ray	1.69Å	0.28	0.05	Adenylate kinase
4nu0.1.A	18.18	monomer	HHblits	X-ray	1.49Å	0.28	0.05	Adenylate kinase
4nu0.2.A	18.18	monomer	HHblits	X-ray	1.49Å	0.28	0.05	Adenylate kinase
4w5h.1.A	18.18	monomer	HHblits	X-ray	1.96Å	0.28	0.05	Adenylate kinase
4w5j.1.A	18.18	monomer	HHblits	X-ray	1.65Å	0.28	0.05	Adenylate kinase
2osb.1.A	30.00	monomer	HHblits	X-ray	1.80Å	0.35	0.04	Adenylate kinase
2osb.2.A	30.00	monomer	HHblits	X-ray	1.80Å	0.35	0.04	Adenylate kinase
4qbh.1.A	25.00	monomer	HHblits	X-ray	1.67Å	0.33	0.04	Adenylate kinase
4qbh.2.A	25.00	monomer	HHblits	X-ray	1.67Å	0.33	0.04	Adenylate kinase
4mkf.1.A	25.00	monomer	HHblits	X-ray	1.70Å	0.32	0.04	Adenylate kinase
4mkf.2.A	25.00	monomer	HHblits	X-ray	1.70Å	0.32	0.04	Adenylate kinase
4jlo.1.A	30.00	monomer	HHblits	X-ray	1.73Å	0.32	0.04	Adenylate kinase
4jlo.2.A	30.00	monomer	HHblits	X-ray	1.73Å	0.32	0.04	Adenylate kinase
4ike.1.A	30.00	monomer	HHblits	X-ray	1.48Å	0.32	0.04	Adenylate kinase
2rh5.2.A	30.00	monomer	HHblits	X-ray	2.48Å	0.32	0.04	Adenylate kinase
2rh5.3.A	30.00	monomer	HHblits	X-ray	2.48Å	0.32	0.04	Adenylate kinase
2rgx.1.A	30.00	monomer	HHblits	X-ray	1.90Å	0.32	0.04	Adenylate kinase
2rh5.1.A	30.00	monomer	HHblits	X-ray	2.48Å	0.32	0.04	Adenylate kinase
4ike.2.A	30.00	monomer	HHblits	X-ray	1.48Å	0.32	0.04	Adenylate kinase
3sr0.2.A	30.00	monomer	HHblits	X-ray	1.56Å	0.32	0.04	Adenylate kinase
4cf7.1.A	30.00	monomer	HHblits	X-ray	1.59Å	0.32	0.04	ADENYLATE KINASE
4cf7.2.A	30.00	monomer	HHblits	X-ray	1.59Å	0.32	0.04	ADENYLATE KINASE
3hpr.1.A	20.00	monomer	HHblits	X-ray	2.00Å	0.32	0.04	Adenylate kinase
4jky.1.A	30.00	monomer	HHblits	X-ray	2.37Å	0.32	0.04	Adenylate kinase
4jky.2.A	30.00	monomer	HHblits	X-ray	2.37Å	0.32	0.04	Adenylate kinase
4jl5.1.A	30.00	monomer	HHblits	X-ray	1.24Å	0.32	0.04	Adenylate kinase
4jl5.2.A	30.00	monomer	HHblits	X-ray	1.24Å	0.32	0.04	Adenylate kinase
1s3g.1.A	20.00	monomer	HHblits	X-ray	2.25Å	0.32	0.04	Adenylate kinase
3co5.1.A	25.00	homo-dimer	HHblits	X-ray	2.40Å	0.28	0.04	Putative two-component system transcriptional response regulator