SWISS-MODEL Homology Modelling Report

Model Building Report

This document lists the results for the homology modelling project "B2UTT1" submitted to SWISS-MODEL workspace on Oct. 17, 2017, 7:13 p.m..The submitted primary amino acid sequence is given in Table T1.

If you use any results in your research, please cite the relevant publications:

Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano Gallo Cassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede. (2014). SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Research (1 July 2014) 42 (W1): W252-W258; doi: 10.1093/nar/gku340.
Arnold, K., Bordoli, L., Kopp, J. and Schwede, T. (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics, 22, 195-201.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350

Results

The SWISS-MODEL template library (SMTL version 2017-10-11, PDB release 2017-10-06) was searched with Blast (Altschul et al., 1997) and HHBlits (Remmert, et al., 2011) for evolutionary related structures matching the target sequence in Table T1. For details on the template search, see Materials and Methods. Overall 664 templates were found (Table T2).

Models

The following models were built (see Materials and Methods "Model Building"):

Model #01

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. homo-dimer (matching prediction)
2 x DGL: D-GLUTAMIC ACID;
0.980.02
QMEAN0.02
2.32
All Atom2.14
Solvation1.66
Torsion-0.79
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
5w1q.1.A97.25homo-dimerHHblitsX-ray1.95Å0.59 1 - 254 1.00Glutamate racemase
LigandAdded to ModelDescription
DGL
D-GLUTAMIC ACID
DGL
D-GLUTAMIC ACID
GOL✕ - Not biologically relevant.
GLYCEROL
GOL✕ - Not biologically relevant.
GLYCEROL
GOL✕ - Not biologically relevant.
GLYCEROL
GOL✕ - Not biologically relevant.
GLYCEROL
GOL✕ - Not biologically relevant.
GLYCEROL

Target    MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASALALEE
5w1q.1.A MKIGVFDSGVGGFSVLKSLLKAQIFDKIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASALALEE

Target MQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLE
5w1q.1.A MQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLE

Target TCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNACAFPKVEFHASG
5w1q.1.A TCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYTLKKNACTFPKVEFHASG

Target DVVWLEKQAKEWLKL
5w1q.1.A DVVWLEKQAKEWLKL




Model #02

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER (matching prediction)
None
0.13-3.11
QMEAN-3.11
-1.50
All Atom-1.13
Solvation-1.34
Torsion-2.42
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
1xtu.1.A15.00homo-tetramerHHblitsX-ray2.80Å0.26 11 - 90 0.31Probable uracil phosphoribosyltransferase
LigandAdded to ModelDescription
CTP✕ - Binding site not conserved.
CYTIDINE-5'-TRIPHOSPHATE
CTP✕ - Binding site not conserved.
CYTIDINE-5'-TRIPHOSPHATE
CTP✕ - Binding site not conserved.
CYTIDINE-5'-TRIPHOSPHATE
CTP✕ - Binding site not conserved.
CYTIDINE-5'-TRIPHOSPHATE
U5P✕ - Binding site not conserved.
URIDINE-5'-MONOPHOSPHATE
U5P✕ - Binding site not conserved.
URIDINE-5'-MONOPHOSPHATE
U5P✕ - Binding site not conserved.
URIDINE-5'-MONOPHOSPHATE
U5P✕ - Binding site not conserved.
URIDINE-5'-MONOPHOSPHATE

Target    MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYG-----DSAR--------VPYGTKDPTTIK---------------QFGL
1xtu.1.A ----------AAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIPDIRAKVDNVIIADPMIATASTML

Target EALDFFKPHKIELLIVACNTASALALEEMQKHS-KIPIVGVIGPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQ
1xtu.1.A KVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLF-----------------------------------------

Target QGYLNVSHLATSLFVPLIEENILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSG
1xtu.1.A --------------------------------------------------------------------------------

Target DAIVEYLQQKYALKKNACAFPKVEFHASGDVVWLEKQAKEWLKL
1xtu.1.A --------------------------------------------




Model #03

FileBuilt withOligo-StateLigandsGMQEQMEAN
PDB ProMod3 Version 1.0.2. MONOMER
None
0.10-2.75
QMEAN-2.75
-1.61
All Atom-0.43
Solvation-1.68
Torsion-2.08
TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityRangeCoverageDescription
1pxw.2.A10.81monomerHHblitsX-ray1.94Å0.25 54 - 131 0.29LSU ribosomal protein L7AE
The template contained no ligands.
Target    MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASA---LA
1pxw.2.A -----------------------------------------------------TTKAVERGQAKLVIIAEDVDPEEIVAH

Target LEEMQKHSKIPIVGVIGPSILAIKQQVKDKNA-PILVLG-TKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILE
1pxw.2.A LPPLCEEKEIPYIYVP--SKKELGAA--AGIEVAAASVAIIEPGKARDLVEEIAMK------------------------

Target GELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNACAFPKVE
1pxw.2.A --------------------------------------------------------------------------------

Target FHASGDVVWLEKQAKEWLKL
1pxw.2.A --------------------




Materials and Methods

Template Search

Template search with Blast and HHBlits has been performed against the SWISS-MODEL template library (SMTL, last update: 2017-10-11, last included PDB release: 2017-10-06).

The target sequence was searched with BLAST (Altschul et al., 1997) against the primary amino acid sequence contained in the SMTL. A total of 37 templates were found.

An initial HHblits profile has been built using the procedure outlined in (Remmert, et al., 2011), followed by 1 iteration of HHblits against NR20. The obtained profile has then be searched against all profiles of the SMTL. A total of 639 templates were found.

Template Selection

For each identified template, the template's quality has been predicted from features of the target-template alignment. The templates with the highest quality have then been selected for model building.

Model Building

Models are built based on the target-template alignment using ProMod3. Coordinates which are conserved between the target and the template are copied from the template to the model. Insertions and deletions are remodelled using a fragment library. Side chains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field. In case loop modelling with ProMod3 fails, an alternative model is built with PROMOD-II (Guex, et al., 1997).

Model Quality Estimation

The global and per-residue model quality has been assessed using the QMEAN scoring function (Benkert, et al., 2011) . For improved performance, weights of the individual QMEAN terms have been trained specifically for SWISS-MODEL.

Ligand Modelling

Ligands present in the template structure are transferred by homology to the model when the following criteria are met (Gallo -Casserino, to be published): (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contact with the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between the target and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The model summary includes information on why and which ligand has not been included.

Oligomeric State Conservation

Homo-oligomeric structure of the target protein is predicted based on the analysis of pairwise interfaces of the identified template structures. For each relevant interface between polypeptide chains (interfaces with more than 10 residue-residue interactions), the QscoreOligomer (Mariani et al., 2011) is predicted from features such as similarity to target and frequency of observing this interface in the identified templates (Kiefer, Bertoni, Biasini, to be published). The prediction is performed with a random forest regressor using these features as input parameters to predict the probability of conservation for each interface. The QscoreOligomer of the whole complex is then calculated as the weight-averaged QscoreOligomer of the interfaces. The oligomeric state of the target is predicted to be the same as in the template when QscoreOligomer is predicted to be higher or equal to 0.5.

References

Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25, 3389-3402.
Remmert, M., Biegert, A., Hauser, A. and Soding, J. (2012) HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nat Methods, 9, 173-175.
Guex, N. and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis, 18, 2714-2723.
Sali, A. and Blundell, T.L. (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol, 234, 779-815.
Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics, 27, 343-350.
Mariani, V., Kiefer, F., Schmidt, T., Haas, J. and Schwede, T. (2011) Assessment of template based protein structure predictions in CASP9. Proteins, 79 Suppl 10, 37-58.

Table T1:

Primary amino acid sequence for which templates were searched and models were built.

MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAI
KQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFA
LSTPPLLIHSGDAIVEYLQQKYALKKNACAFPKVEFHASGDVVWLEKQAKEWLKL

Table T2:

TemplateSeq IdentityOligo-stateFound byMethodResolutionSeq SimilarityCoverageDescription
5w1q.1.A97.25homo-dimerHHblitsX-ray1.95Å0.591.00Glutamate racemase
2jfy.1.B92.94homo-dimerHHblitsX-ray1.90Å0.581.00GLUTAMATE RACEMASE
2jfz.1.A92.94homo-dimerHHblitsX-ray1.86Å0.581.00GLUTAMATE RACEMASE
2jfx.1.A92.94homo-dimerHHblitsX-ray2.30Å0.581.00GLUTAMATE RACEMASE
2jfx.1.B92.94homo-dimerHHblitsX-ray2.30Å0.581.00GLUTAMATE RACEMASE
2jfy.1.A92.94homo-dimerHHblitsX-ray1.90Å0.581.00GLUTAMATE RACEMASE
4b1f.1.B92.94homo-dimerHHblitsX-ray2.05Å0.581.00GLUTAMATE RACEMASE
2w4i.1.A92.94homo-tetramerHHblitsX-ray1.87Å0.581.00GLUTAMATE RACEMASE
3uho.1.A55.28monomerBLASTX-ray2.20Å0.450.96Glutamate racemase
3uhf.2.A55.28monomerBLASTX-ray1.83Å0.450.96Glutamate racemase
3uhp.1.A55.28monomerBLASTX-ray2.79Å0.450.96Glutamate racemase
3uho.1.A53.28monomerHHblitsX-ray2.20Å0.440.96Glutamate racemase
3uhf.2.A53.28monomerHHblitsX-ray1.83Å0.440.96Glutamate racemase
3uhp.1.A53.28monomerHHblitsX-ray2.79Å0.440.96Glutamate racemase
2vvt.1.A36.33homo-dimerHHblitsX-ray1.65Å0.370.96GLUTAMATE RACEMASE
2vvt.1.B36.33homo-dimerHHblitsX-ray1.65Å0.370.96GLUTAMATE RACEMASE
1zuw.1.A34.69homo-dimerHHblitsX-ray1.75Å0.370.96glutamate racemase 1
1zuw.1.B34.69homo-dimerHHblitsX-ray1.75Å0.370.96glutamate racemase 1
2jfp.1.A36.48homo-dimerHHblitsX-ray1.98Å0.370.96GLUTAMATE RACEMASE
2jfo.1.B36.48homo-dimerHHblitsX-ray2.50Å0.370.96GLUTAMATE RACEMASE
2jfq.1.A33.88homo-dimerHHblitsX-ray2.15Å0.360.96GLUTAMATE RACEMASE
2jfq.1.B33.88homo-dimerHHblitsX-ray2.15Å0.360.96GLUTAMATE RACEMASE
2gzm.1.A34.29homo-dimerHHblitsX-ray1.99Å0.360.96Glutamate racemase
2gzm.1.B34.29homo-dimerHHblitsX-ray1.99Å0.360.96Glutamate racemase
2gzm.2.B34.29homo-dimerHHblitsX-ray1.99Å0.360.96Glutamate racemase
3hfr.1.A33.47homo-dimerHHblitsX-ray2.30Å0.360.96Glutamate racemase
3hfr.1.B33.47homo-dimerHHblitsX-ray2.30Å0.360.96Glutamate racemase
2jfw.1.A33.61homo-dimerHHblitsX-ray2.00Å0.360.96GLUTAMATE RACEMASE
1b73.1.A36.25homo-dimerHHblitsX-ray2.30Å0.370.94GLUTAMATE RACEMASE
2dwu.1.A32.79homo-dimerHHblitsX-ray1.60Å0.350.96Glutamate racemase
2dwu.2.A32.79homo-dimerHHblitsX-ray1.60Å0.350.96Glutamate racemase
2ohv.1.A29.39homo-dimerHHblitsX-ray2.50Å0.350.96Glutamate Racemase
2ohg.1.A29.39homo-dimerHHblitsX-ray2.50Å0.350.96Glutamate racemase
2oho.1.A29.39homo-dimerHHblitsX-ray2.25Å0.350.96Glutamate Racemase
2oho.1.B29.39homo-dimerHHblitsX-ray2.25Å0.350.96Glutamate Racemase
5ijw.1.A28.16homo-dimerHHblitsX-ray1.76Å0.340.96Glutamate racemase
5ijw.1.B28.16homo-dimerHHblitsX-ray1.76Å0.340.96Glutamate racemase
3out.1.A31.67homo-hexamerHHblitsX-ray1.65Å0.360.94Glutamate racemase
5hj7.1.A28.28homo-dimerHHblitsX-ray2.30Å0.340.96Glutamate racemase
2jfp.1.A36.36homo-dimerBLASTX-ray1.98Å0.370.91GLUTAMATE RACEMASE
2jfo.1.B36.36homo-dimerBLASTX-ray2.50Å0.370.91GLUTAMATE RACEMASE
2vvt.1.A36.36homo-dimerBLASTX-ray1.65Å0.370.91GLUTAMATE RACEMASE
2vvt.1.B36.36homo-dimerBLASTX-ray1.65Å0.370.91GLUTAMATE RACEMASE
2jfw.1.A33.19homo-dimerBLASTX-ray2.00Å0.370.91GLUTAMATE RACEMASE
1zuw.1.A35.96homo-dimerBLASTX-ray1.75Å0.380.89glutamate racemase 1
1zuw.1.B35.96homo-dimerBLASTX-ray1.75Å0.380.89glutamate racemase 1
3hfr.1.A32.76homo-dimerBLASTX-ray2.30Å0.360.91Glutamate racemase
3hfr.1.B32.76homo-dimerBLASTX-ray2.30Å0.360.91Glutamate racemase
2jfn.1.A23.87monomerHHblitsX-ray1.90Å0.320.95GLUTAMATE RACEMASE
2jfq.1.A35.75homo-dimerBLASTX-ray2.15Å0.380.87GLUTAMATE RACEMASE
2jfq.1.B35.75homo-dimerBLASTX-ray2.15Å0.380.87GLUTAMATE RACEMASE
2dwu.1.A34.39homo-dimerBLASTX-ray1.60Å0.370.87Glutamate racemase
2dwu.2.A34.39homo-dimerBLASTX-ray1.60Å0.370.87Glutamate racemase
5hj7.1.A30.80homo-dimerBLASTX-ray2.30Å0.350.88Glutamate racemase
2gzm.1.A38.50homo-dimerBLASTX-ray1.99Å0.390.73Glutamate racemase
2gzm.1.B38.50homo-dimerBLASTX-ray1.99Å0.390.73Glutamate racemase
2gzm.2.B38.50homo-dimerBLASTX-ray1.99Å0.390.73Glutamate racemase
5b19.1.A17.79homo-dimerHHblitsX-ray1.85Å0.300.82Aspartate racemase
5b19.1.B17.79homo-dimerHHblitsX-ray1.85Å0.300.82Aspartate racemase
3s81.1.A19.70homo-dimerHHblitsX-ray1.80Å0.310.80Putative aspartate racemase
2zsk.1.A22.66homo-dimerHHblitsX-ray2.55Å0.300.80226aa long hypothetical aspartate racemase
1jfl.1.A21.89homo-dimerHHblitsX-ray1.90Å0.300.79ASPARTATE RACEMASE
2dx7.1.A21.39homo-dimerHHblitsX-ray2.00Å0.300.79aspartate racemase
2dx7.1.B21.39homo-dimerHHblitsX-ray2.00Å0.300.79aspartate racemase
5elm.1.A14.08homo-dimerHHblitsX-ray2.00Å0.270.81Asp/Glu_racemase family protein
5elm.1.B14.08homo-dimerHHblitsX-ray2.00Å0.270.81Asp/Glu_racemase family protein
5elm.2.A14.08homo-dimerHHblitsX-ray2.00Å0.270.81Asp/Glu_racemase family protein
5elm.2.B14.08homo-dimerHHblitsX-ray2.00Å0.270.81Asp/Glu_racemase family protein
2xed.1.A10.73monomerHHblitsX-ray1.95Å0.260.80PUTATIVE MALEATE ISOMERASE
5ell.1.A14.22homo-dimerHHblitsX-ray1.80Å0.270.80Asp/Glu_racemase family protein
5ell.1.B14.22homo-dimerHHblitsX-ray1.80Å0.270.80Asp/Glu_racemase family protein
2xec.1.A11.27homo-dimerHHblitsX-ray2.20Å0.270.80PUTATIVE MALEATE ISOMERASE
5hqt.1.A14.71homo-dimerHHblitsX-ray1.60Å0.270.80aspartate/glutamate racemase
4fq7.1.A8.82homo-tetramerHHblitsX-ray3.00Å0.260.80Maleate cis-trans isomerase
4fq5.1.A9.31homo-tetramerHHblitsX-ray2.10Å0.260.80Maleate cis-trans isomerase
4fq5.1.B9.31homo-tetramerHHblitsX-ray2.10Å0.260.80Maleate cis-trans isomerase
4ix1.1.A11.59homo-dimerHHblitsX-ray2.80Å0.250.81hypothetical protein
4ix1.1.B11.59homo-dimerHHblitsX-ray2.80Å0.250.81hypothetical protein
1b73.1.A41.92homo-dimerBLASTX-ray2.30Å0.410.65GLUTAMATE RACEMASE
2eq5.1.A16.83homo-dimerHHblitsX-ray2.20Å0.260.79228aa long hypothetical hydantoin racemase
2eq5.2.B16.83homo-dimerHHblitsX-ray2.20Å0.260.79228aa long hypothetical hydantoin racemase
3ojc.1.A19.69homo-tetramerHHblitsX-ray1.75Å0.300.76Putative aspartate/glutamate racemase
3ojc.1.B19.69homo-tetramerHHblitsX-ray1.75Å0.300.76Putative aspartate/glutamate racemase
3ojc.1.C19.69homo-tetramerHHblitsX-ray1.75Å0.300.76Putative aspartate/glutamate racemase
3ojc.1.D19.69homo-tetramerHHblitsX-ray1.75Å0.300.76Putative aspartate/glutamate racemase
3out.1.A36.26homo-hexamerBLASTX-ray1.65Å0.390.67Glutamate racemase
2dgd.1.A11.50homo-octamerHHblitsX-ray2.90Å0.250.78223aa long hypothetical arylmalonate decarboxylase
5ijw.1.A35.76homo-dimerBLASTX-ray1.76Å0.390.65Glutamate racemase
5ijw.1.B35.76homo-dimerBLASTX-ray1.76Å0.390.65Glutamate racemase
2oho.1.A33.73homo-dimerBLASTX-ray2.25Å0.380.65Glutamate Racemase
2oho.1.B33.73homo-dimerBLASTX-ray2.25Å0.380.65Glutamate Racemase
2ohv.1.A33.73homo-dimerBLASTX-ray2.50Å0.380.65Glutamate Racemase
2ohg.1.A33.73homo-dimerBLASTX-ray2.50Å0.380.65Glutamate racemase
3qvj.1.A14.36homo-hexamerHHblitsX-ray2.10Å0.270.74Putative hydantoin racemase
5lfd.1.A13.76homo-hexamerHHblitsX-ray2.15Å0.260.74Allantoin racemase
3qvl.1.A12.90homo-hexamerHHblitsX-ray1.82Å0.260.73Putative hydantoin racemase
3ixm.1.A7.45monomerHHblitsX-ray1.90Å0.240.74Arylmalonate decarboxylase
2vlb.1.A7.45monomerHHblitsX-ray1.92Å0.240.74ARYLMALONATE DECARBOXYLASE
2vlb.2.A7.45monomerHHblitsX-ray1.92Å0.240.74ARYLMALONATE DECARBOXYLASE
2vlb.3.A7.45monomerHHblitsX-ray1.92Å0.240.74ARYLMALONATE DECARBOXYLASE
2vlb.4.A7.45monomerHHblitsX-ray1.92Å0.240.74ARYLMALONATE DECARBOXYLASE
3dtv.3.A6.91monomerHHblitsX-ray2.10Å0.240.74Arylmalonate decarboxylase
3dtv.2.A6.91monomerHHblitsX-ray2.10Å0.240.74Arylmalonate decarboxylase
3dtv.1.A6.91monomerHHblitsX-ray2.10Å0.240.74Arylmalonate decarboxylase
3dtv.4.A6.91monomerHHblitsX-ray2.10Å0.240.74Arylmalonate decarboxylase
3eis.1.A6.91monomerHHblitsX-ray2.10Å0.240.74Arylmalonate decarboxylase
3eis.2.A6.91monomerHHblitsX-ray2.10Å0.240.74Arylmalonate decarboxylase
3dg9.1.A6.91monomerHHblitsX-ray1.50Å0.240.74Arylmalonate decarboxylase
3ixl.1.A6.38monomerHHblitsX-ray1.45Å0.230.74Arylmalonate decarboxylase
2jfn.1.A28.93monomerBLASTX-ray1.90Å0.360.62GLUTAMATE RACEMASE
4rwe.1.A11.17monomerHHblitsX-ray1.65Å0.260.70Sugar-binding transport protein
3l6u.1.A10.06homo-dimerHHblitsX-ray1.90Å0.260.70ABC-TYPE SUGAR TRANSPORT SYSTEM PERIPLASMIC COMPONENT
3l6u.1.B10.06homo-dimerHHblitsX-ray1.90Å0.260.70ABC-TYPE SUGAR TRANSPORT SYSTEM PERIPLASMIC COMPONENT
3zvm.1.A10.38monomerHHblitsX-ray2.00Å0.240.72BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
3zvm.2.A10.38monomerHHblitsX-ray2.00Å0.240.72BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
3zvl.1.A10.38monomerHHblitsX-ray1.65Å0.240.72BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
2q5c.1.A11.80monomerHHblitsX-ray1.49Å0.260.63NtrC family transcriptional regulator
4ccz.1.A11.85monomerHHblitsX-ray2.70Å0.250.53METHIONINE SYNTHASE
1uag.1.A13.93monomerHHblitsX-ray1.95Å0.270.48UDP-N-ACETYLMURAMOYL-L-ALANINE/:D-GLUTAMATE LIGASE
1eeh.1.A13.93monomerHHblitsX-ray1.90Å0.270.48UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
2uag.1.A13.93monomerHHblitsX-ray1.70Å0.270.48PROTEIN (UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE)
1e0d.1.A13.93monomerHHblitsX-ray2.40Å0.270.48UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5e.1.A13.93monomerHHblitsX-ray1.84Å0.270.48UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
5a5f.1.A13.93monomerHHblitsX-ray1.90Å0.270.48UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
1jhz.1.A12.40homo-dimerHHblitsX-ray2.40Å0.270.47PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
1jhz.1.B12.40homo-dimerHHblitsX-ray2.40Å0.270.47PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
2pud.1.B13.33homo-dimerHHblitsX-ray2.60Å0.280.47PROTEIN (PURINE REPRESSOR)
1bdi.1.B12.61homo-dimerHHblitsX-ray3.00Å0.270.47PROTEIN (PURINE REPRESSOR)
4rk1.1.A12.50homo-dimerHHblitsX-ray1.90Å0.260.47Ribose transcriptional regulator
3o3m.1.B10.66hetero-oligomerHHblitsX-ray1.82Å0.230.48beta subunit 2-hydroxyacyl-CoA dehydratase
3o75.1.A13.64homo-dimerHHblitsX-ray2.30Å0.290.43Fructose transport system repressor FruR
3o74.1.B13.64homo-dimerHHblitsX-ray2.00Å0.290.43Fructose transport system repressor FruR
1jh9.1.B11.82homo-dimerHHblitsX-ray2.55Å0.270.43PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
4o5a.1.A10.91homo-dimerHHblitsX-ray1.78Å0.260.43LacI family transcription regulator
3brq.1.A11.01homo-dimerHHblitsX-ray2.00Å0.260.43HTH-type transcriptional regulator ascG
3brq.1.B11.01homo-dimerHHblitsX-ray2.00Å0.260.43HTH-type transcriptional regulator ascG
2p9h.1.A9.01homo-dimerHHblitsX-ray2.00Å0.250.44Lactose operon repressor
3edc.1.A8.11homo-tetramerHHblitsX-ray2.10Å0.240.44Lactose operon repressor
3edc.1.B8.11homo-tetramerHHblitsX-ray2.10Å0.240.44Lactose operon repressor
3edc.1.C8.11homo-tetramerHHblitsX-ray2.10Å0.240.44Lactose operon repressor
3edc.1.D8.11homo-tetramerHHblitsX-ray2.10Å0.240.44Lactose operon repressor
1lbi.1.A8.11homo-tetramerHHblitsX-ray2.70Å0.240.44LAC REPRESSOR
1lbi.1.B8.11homo-tetramerHHblitsX-ray2.70Å0.240.44LAC REPRESSOR
1lbi.1.C8.11homo-tetramerHHblitsX-ray2.70Å0.240.44LAC REPRESSOR
1lbi.1.D8.11homo-tetramerHHblitsX-ray2.70Å0.240.44LAC REPRESSOR
1lbh.1.A8.11homo-tetramerHHblitsX-ray3.20Å0.240.44INTACT LACTOSE OPERON REPRESSOR WITH GRATUITOUS INDUCER IPTG
1lbh.1.B8.11homo-tetramerHHblitsX-ray3.20Å0.240.44INTACT LACTOSE OPERON REPRESSOR WITH GRATUITOUS INDUCER IPTG
1lbh.1.C8.11homo-tetramerHHblitsX-ray3.20Å0.240.44INTACT LACTOSE OPERON REPRESSOR WITH GRATUITOUS INDUCER IPTG
1lbh.1.D8.11homo-tetramerHHblitsX-ray3.20Å0.240.44INTACT LACTOSE OPERON REPRESSOR WITH GRATUITOUS INDUCER IPTG
1jyf.1.A8.11homo-dimerHHblitsX-ray3.00Å0.240.44Lactose Operon Repressor
4rk0.1.A14.29homo-dimerHHblitsX-ray1.80Å0.280.41LacI family sugar-binding transcriptional regulator
4rk0.1.B14.29homo-dimerHHblitsX-ray1.80Å0.280.41LacI family sugar-binding transcriptional regulator
3ojc.1.A15.69homo-tetramerHHblitsX-ray1.75Å0.280.40Putative aspartate/glutamate racemase
3ojc.1.B15.69homo-tetramerHHblitsX-ray1.75Å0.280.40Putative aspartate/glutamate racemase
3ojc.1.C15.69homo-tetramerHHblitsX-ray1.75Å0.280.40Putative aspartate/glutamate racemase
3ojc.1.D15.69homo-tetramerHHblitsX-ray1.75Å0.280.40Putative aspartate/glutamate racemase
5lfd.1.A13.00homo-hexamerHHblitsX-ray2.15Å0.290.39Allantoin racemase
5elm.1.A19.80homo-dimerHHblitsX-ray2.00Å0.280.40Asp/Glu_racemase family protein
5elm.1.B19.80homo-dimerHHblitsX-ray2.00Å0.280.40Asp/Glu_racemase family protein
5elm.2.A19.80homo-dimerHHblitsX-ray2.00Å0.280.40Asp/Glu_racemase family protein
5elm.2.B19.80homo-dimerHHblitsX-ray2.00Å0.280.40Asp/Glu_racemase family protein
5hqt.1.A16.83homo-dimerHHblitsX-ray1.60Å0.280.40aspartate/glutamate racemase
2zsk.1.A12.75homo-dimerHHblitsX-ray2.55Å0.270.40226aa long hypothetical aspartate racemase
1jfl.1.A12.75homo-dimerHHblitsX-ray1.90Å0.270.40ASPARTATE RACEMASE
1iu9.1.A21.43monomerHHblitsX-ray2.04Å0.290.38aspartate racemase
3s81.1.A11.65homo-dimerHHblitsX-ray1.80Å0.260.40Putative aspartate racemase
5b19.1.A8.82homo-dimerHHblitsX-ray1.85Å0.260.40Aspartate racemase
5b19.1.B8.82homo-dimerHHblitsX-ray1.85Å0.260.40Aspartate racemase
5ell.1.A16.00homo-dimerHHblitsX-ray1.80Å0.270.39Asp/Glu_racemase family protein
5ell.1.B16.00homo-dimerHHblitsX-ray1.80Å0.270.39Asp/Glu_racemase family protein
2dx7.1.A13.13homo-dimerHHblitsX-ray2.00Å0.270.39aspartate racemase
2dx7.1.B13.13homo-dimerHHblitsX-ray2.00Å0.270.39aspartate racemase
3dg9.1.A11.34monomerHHblitsX-ray1.50Å0.270.38Arylmalonate decarboxylase
3ixm.1.A11.34monomerHHblitsX-ray1.90Å0.260.38Arylmalonate decarboxylase
2vlb.1.A11.34monomerHHblitsX-ray1.92Å0.260.38ARYLMALONATE DECARBOXYLASE
2vlb.2.A11.34monomerHHblitsX-ray1.92Å0.260.38ARYLMALONATE DECARBOXYLASE
2vlb.3.A11.34monomerHHblitsX-ray1.92Å0.260.38ARYLMALONATE DECARBOXYLASE
2vlb.4.A11.34monomerHHblitsX-ray1.92Å0.260.38ARYLMALONATE DECARBOXYLASE
4zht.1.A16.13homo-tetramerHHblitsX-ray2.69Å0.280.36Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase
3oka.1.A11.83hetero-oligomerHHblitsX-ray2.20Å0.270.36GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
3h5t.1.A9.57monomerHHblitsX-ray2.53Å0.260.37Transcriptional regulator, LacI family
3dtv.3.A11.70monomerHHblitsX-ray2.10Å0.260.37Arylmalonate decarboxylase
3dtv.2.A11.70monomerHHblitsX-ray2.10Å0.260.37Arylmalonate decarboxylase
3dtv.1.A11.70monomerHHblitsX-ray2.10Å0.260.37Arylmalonate decarboxylase
3dtv.4.A11.70monomerHHblitsX-ray2.10Å0.260.37Arylmalonate decarboxylase
3eis.1.A11.70monomerHHblitsX-ray2.10Å0.260.37Arylmalonate decarboxylase
3eis.2.A11.70monomerHHblitsX-ray2.10Å0.260.37Arylmalonate decarboxylase
3okp.1.A11.96monomerHHblitsX-ray2.00Å0.270.36GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
1gso.1.A16.48monomerHHblitsX-ray1.60Å0.270.36PROTEIN (GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE)
1f6d.1.B14.13homo-dimerHHblitsX-ray2.50Å0.260.36UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE
1f6d.1.A14.13homo-dimerHHblitsX-ray2.50Å0.260.36UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE
3mjf.1.A15.38monomerHHblitsX-ray1.47Å0.270.36Phosphoribosylamine--glycine ligase
3lp8.1.A20.45monomerHHblitsX-ray2.15Å0.290.35Phosphoribosylamine-glycine ligase
1vgv.1.B13.19homo-dimerHHblitsX-ray2.31Å0.260.36UDP-N-acetylglucosamine 2-epimerase
1vgv.1.A13.19homo-dimerHHblitsX-ray2.31Å0.260.36UDP-N-acetylglucosamine 2-epimerase
1vgv.2.B13.19homo-dimerHHblitsX-ray2.31Å0.260.36UDP-N-acetylglucosamine 2-epimerase
2qk4.1.A12.22monomerHHblitsX-ray2.45Å0.270.35Trifunctional purine biosynthetic protein adenosine-3
2ys6.1.A14.61monomerHHblitsX-ray2.21Å0.260.35Phosphoribosylglycinamide synthetase
2ip4.1.A13.48monomerHHblitsX-ray2.80Å0.260.35Phosphoribosylamine--glycine ligase
2ip4.2.A13.48monomerHHblitsX-ray2.80Å0.260.35Phosphoribosylamine--glycine ligase
1zuw.1.A17.44homo-dimerHHblitsX-ray1.75Å0.280.34glutamate racemase 1
1zuw.1.B17.44homo-dimerHHblitsX-ray1.75Å0.280.34glutamate racemase 1
5hj7.1.A11.49homo-dimerHHblitsX-ray2.30Å0.270.34Glutamate racemase
2xcl.1.A11.49monomerHHblitsX-ray2.10Å0.270.34PHOSPHORIBOSYLAMINE--GLYCINE LIGASE
5ijw.1.A10.34homo-dimerHHblitsX-ray1.76Å0.270.34Glutamate racemase
5ijw.1.B10.34homo-dimerHHblitsX-ray1.76Å0.270.34Glutamate racemase
2yya.1.A12.64monomerHHblitsX-ray2.40Å0.260.34Phosphoribosylamine--glycine ligase
3out.1.A15.29homo-hexamerHHblitsX-ray1.65Å0.280.33Glutamate racemase
2jfp.1.A11.76homo-dimerHHblitsX-ray1.98Å0.270.33GLUTAMATE RACEMASE
2jfo.1.B11.76homo-dimerHHblitsX-ray2.50Å0.270.33GLUTAMATE RACEMASE
3hfr.1.A14.12homo-dimerHHblitsX-ray2.30Å0.270.33Glutamate racemase
3hfr.1.B14.12homo-dimerHHblitsX-ray2.30Å0.270.33Glutamate racemase
3hut.1.A11.90monomerHHblitsX-ray1.93Å0.270.33putative branched-chain amino acid ABC transporter
4x9s.1.A20.48monomerHHblitsX-ray1.60Å0.280.33Phosphoribosyl isomerase A
2ohv.1.A13.10homo-dimerHHblitsX-ray2.50Å0.270.33Glutamate Racemase
2ohg.1.A13.10homo-dimerHHblitsX-ray2.50Å0.270.33Glutamate racemase
2y88.1.A16.47monomerHHblitsX-ray1.33Å0.260.33PHOSPHORIBOSYL ISOMERASE A
2y89.1.A16.47monomerHHblitsX-ray2.50Å0.260.33PHOSPHORIBOSYL ISOMERASE A
1dbq.1.A13.41homo-dimerHHblitsX-ray2.20Å0.280.32PURINE REPRESSOR
1dbq.1.B13.41homo-dimerHHblitsX-ray2.20Å0.280.32PURINE REPRESSOR
4wd0.1.A16.87homo-hexamerHHblitsX-ray1.50Å0.270.331-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
2ehj.1.A17.50homo-tetramerHHblitsX-ray2.80Å0.300.31Uracil phosphoribosyltransferase
2ehj.1.C17.50homo-tetramerHHblitsX-ray2.80Å0.300.31Uracil phosphoribosyltransferase
2oho.1.A12.05homo-dimerHHblitsX-ray2.25Å0.260.33Glutamate Racemase
2oho.1.B12.05homo-dimerHHblitsX-ray2.25Å0.260.33Glutamate Racemase
4tx9.1.A16.87monomerHHblitsX-ray1.60Å0.260.33Phosphoribosyl isomerase A
2jfn.1.A9.30monomerHHblitsX-ray1.90Å0.230.34GLUTAMATE RACEMASE
5w1q.1.A12.20homo-dimerHHblitsX-ray1.95Å0.270.32Glutamate racemase
2pug.1.B13.75homo-dimerHHblitsX-ray2.70Å0.280.31PROTEIN (PURINE REPRESSOR)
1jfs.1.B13.75homo-dimerHHblitsX-ray2.90Å0.280.31PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
1vpw.1.B13.75homo-dimerHHblitsX-ray2.70Å0.280.31PURINE REPRESSOR
1bdh.1.B13.75homo-dimerHHblitsX-ray2.70Å0.280.31PROTEIN (PURINE REPRESSOR)
4u28.1.A15.85monomerHHblitsX-ray1.33Å0.260.32Phosphoribosyl isomerase A
5eqv.1.A13.41monomerHHblitsX-ray1.45Å0.260.32bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein
3uk0.1.A13.75monomerHHblitsX-ray1.49Å0.280.31Extracellular ligand-binding receptor
4r9x.1.A16.25homo-dimerHHblitsX-ray1.85Å0.280.31Copper homeostasis protein CutC
4r9x.1.B16.25homo-dimerHHblitsX-ray1.85Å0.280.31Copper homeostasis protein CutC
1vzw.1.A15.85monomerHHblitsX-ray1.80Å0.260.32PHOSPHORIBOSYL ISOMERASE A
2vep.1.A15.85monomerHHblitsX-ray1.80Å0.260.32PHOSPHORIBOSYL ISOMERASE A
1x7i.1.A13.75homo-dimerHHblitsX-ray1.70Å0.280.31Copper homeostasis protein cutC
1x7i.1.B13.75homo-dimerHHblitsX-ray1.70Å0.280.31Copper homeostasis protein cutC
1twd.1.A13.75homo-dimerHHblitsX-ray1.70Å0.280.31Copper homeostasis protein cutC
1twd.1.B13.75homo-dimerHHblitsX-ray1.70Å0.280.31Copper homeostasis protein cutC
2iks.1.A13.92homo-dimerHHblitsX-ray1.85Å0.290.31DNA-binding transcriptional dual regulator
2iks.1.B13.92homo-dimerHHblitsX-ray1.85Å0.290.31DNA-binding transcriptional dual regulator
3cea.1.A9.76homo-tetramerHHblitsX-ray2.40Å0.250.32Myo-inositol 2-dehydrogenase
3rc1.1.A9.88monomerHHblitsX-ray1.71Å0.260.32Sugar 3-ketoreductase
3tx6.1.A9.88monomerHHblitsX-ray1.50Å0.260.32Putative branched-chain amino acid transport system substrate-binding protein
5dn1.1.A16.05monomerHHblitsX-ray1.95Å0.260.32Phosphoribosyl isomerase A
3i45.1.A12.20monomerHHblitsX-ray1.36Å0.250.32Twin-arginine translocation pathway signal protein
4rzt.1.A11.11homo-tetramerHHblitsX-ray3.10Å0.260.32Lac repressor
4rzs.1.B11.11homo-tetramerHHblitsX-ray2.71Å0.260.32Lac repressor
4rzs.1.C11.11homo-tetramerHHblitsX-ray2.71Å0.260.32Lac repressor
4rzs.1.D11.11homo-tetramerHHblitsX-ray2.71Å0.260.32Lac repressor
4rzs.1.A11.11homo-tetramerHHblitsX-ray2.71Å0.260.32Lac repressor
4rzt.1.B11.11homo-tetramerHHblitsX-ray3.10Å0.260.32Lac repressor
1efa.1.C11.11homo-dimerHHblitsX-ray2.60Å0.250.32LAC REPRESSOR
1jwl.1.D11.11homo-dimerHHblitsX-ray4.00Å0.250.32Lactose Operon Repressor
1jye.1.A11.11homo-dimerHHblitsX-ray1.70Å0.250.32Lactose Operon Repressor
1xtu.1.A15.00homo-tetramerHHblitsX-ray2.80Å0.260.31Probable uracil phosphoribosyltransferase
3g6w.1.A15.00homo-tetramerHHblitsX-ray2.90Å0.260.31Uracil phosphoribosyltransferase
3g6w.1.B15.00homo-tetramerHHblitsX-ray2.90Å0.260.31Uracil phosphoribosyltransferase
1xtv.1.B15.00homo-tetramerHHblitsX-ray2.60Å0.260.31Probable uracil phosphoribosyltransferase
1xtv.1.C15.00homo-tetramerHHblitsX-ray2.60Å0.260.31Probable uracil phosphoribosyltransferase
1xtt.1.A15.00homo-tetramerHHblitsX-ray1.80Å0.260.31Probable uracil phosphoribosyltransferase
1xtt.1.B15.00homo-tetramerHHblitsX-ray1.80Å0.260.31Probable uracil phosphoribosyltransferase
1vst.1.A15.00homo-tetramerHHblitsX-ray2.80Å0.260.31Uracil phosphoribosyltransferase
4x2r.1.A18.99monomerHHblitsX-ray1.05Å0.270.311-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
1ez1.1.A14.10homo-dimerHHblitsX-ray1.75Å0.280.31PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2
1ez1.1.B14.10homo-dimerHHblitsX-ray1.75Å0.280.31PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2
2pe5.1.C11.25homo-dimerHHblitsX-ray3.50Å0.250.31Lactose operon repressor
3k9c.1.A12.66homo-dimerHHblitsX-ray2.14Å0.260.31Transcriptional regulator, LacI family protein
2x30.1.A16.88monomerHHblitsX-ray1.95Å0.270.30PHOSPHORIBOSYL ISOMERASE A
1tlf.1.A11.39homo-tetramerHHblitsX-ray2.60Å0.250.31LAC REPRESSOR
1tlf.1.B11.39homo-tetramerHHblitsX-ray2.60Å0.250.31LAC REPRESSOR
1tlf.1.C11.39homo-tetramerHHblitsX-ray2.60Å0.250.31LAC REPRESSOR
1tlf.1.D11.39homo-tetramerHHblitsX-ray2.60Å0.250.31LAC REPRESSOR
3e82.1.A8.97homo-dimerHHblitsX-ray2.04Å0.260.31Putative oxidoreductase
1rdu.1.A11.69monomerHHblitsNMRNA0.260.30conserved hypothetical protein
5vev.1.A10.39monomerHHblitsX-ray1.90Å0.260.30Phosphoribosylamine--glycine ligase
3bo9.1.A7.89homo-dimerHHblitsX-ray2.71Å0.270.30Putative nitroalkan dioxygenase
5gvj.1.A7.89homo-dimerHHblitsX-ray1.90Å0.270.30Enoyl-[acyl-carrier-protein] reductase [FMN]
5gvh.1.A7.89homo-dimerHHblitsX-ray2.29Å0.270.30Enoyl-[acyl-carrier-protein] reductase [FMN]
4axk.1.A13.16monomerHHblitsX-ray2.25Å0.260.301-(5-PHOSPHORIBOSYL)-5-((5'-PHOSPHORIBOSYLAMINO) METHYLIDENEAMINO)IMIDAZOLE-4-CARBOXAMIDE ISOMERASE
4axk.2.A13.16monomerHHblitsX-ray2.25Å0.260.301-(5-PHOSPHORIBOSYL)-5-((5'-PHOSPHORIBOSYLAMINO) METHYLIDENEAMINO)IMIDAZOLE-4-CARBOXAMIDE ISOMERASE
2y85.1.A10.39monomerHHblitsX-ray2.40Å0.250.30PHOSPHORIBOSYL ISOMERASE A
3zs4.1.A10.39monomerHHblitsX-ray1.90Å0.250.30PHOSPHORIBOSYL ISOMERASE A
2aba.1.A9.21monomerHHblitsX-ray1.05Å0.260.30pentaerythritol tetranitrate reductase
4fx7.1.A7.89monomerHHblitsX-ray2.08Å0.260.30Imidazole glycerol phosphate synthase subunit HisF
4gnr.1.A20.83monomerHHblitsX-ray1.00Å0.290.28ABC transporter substrate-binding protein-branched chain amino acid transport
3gka.1.A6.41monomerHHblitsX-ray2.30Å0.230.31N-ethylmaleimide reductase
3t7e.1.A5.13homo-dimerHHblitsX-ray2.25Å0.230.31Ubiquitin-like modifier-activating enzyme ATG7
4x9s.1.A12.99monomerHHblitsX-ray1.60Å0.240.30Phosphoribosyl isomerase A
4mg4.1.A12.00homo-dimerHHblitsX-ray1.70Å0.260.29Phosphonomutase
4mg4.2.B12.00homo-dimerHHblitsX-ray1.70Å0.260.29Phosphonomutase
3w6u.1.A15.07monomerHHblitsX-ray2.00Å0.280.296-phosphogluconate dehydrogenase, NAD-binding protein
2abb.1.A12.16monomerHHblitsX-ray1.00Å0.260.29pentaerythritol tetranitrate reductase
2qiw.1.A9.46homo-dimerHHblitsX-ray1.80Å0.260.29PEP phosphonomutase
2y88.1.A10.53monomerHHblitsX-ray1.33Å0.240.30PHOSPHORIBOSYL ISOMERASE A
2y89.1.A10.53monomerHHblitsX-ray2.50Å0.240.30PHOSPHORIBOSYL ISOMERASE A
3n0x.1.A14.86monomerHHblitsX-ray1.50Å0.260.29Possible substrate binding protein of ABC transporter system
1vys.1.A10.96monomerHHblitsX-ray1.80Å0.270.29PENTAERYTHRITOL TETRANITRATE REDUCTASE
3p84.1.A10.96monomerHHblitsX-ray1.10Å0.270.29Pentaerythritol tetranitrate reductase
3p74.1.A10.96monomerHHblitsX-ray1.20Å0.260.29Pentaerythritol tetranitrate reductase
1pxw.1.A10.81monomerHHblitsX-ray1.94Å0.250.29LSU ribosomal protein L7AE
1pxw.2.A10.81monomerHHblitsX-ray1.94Å0.250.29LSU ribosomal protein L7AE
3rui.1.A5.26hetero-oligomerHHblitsX-ray1.91Å0.230.30Ubiquitin-like modifier-activating enzyme ATG7
3cky.1.A8.22homo-tetramerHHblitsX-ray2.30Å0.260.292-hydroxymethyl glutarate dehydrogenase
3cky.1.C8.22homo-tetramerHHblitsX-ray2.30Å0.260.292-hydroxymethyl glutarate dehydrogenase
3p82.1.A10.96monomerHHblitsX-ray2.20Å0.260.29Pentaerythritol tetranitrate reductase
3p67.1.A10.96monomerHHblitsX-ray1.50Å0.260.29Pentaerythritol tetranitrate reductase
3khj.1.A18.31homo-tetramerHHblitsX-ray2.80Å0.280.28Inosine-5-monophosphate dehydrogenase
3khj.1.B18.31homo-tetramerHHblitsX-ray2.80Å0.280.28Inosine-5-monophosphate dehydrogenase
3khj.1.C18.31homo-tetramerHHblitsX-ray2.80Å0.280.28Inosine-5-monophosphate dehydrogenase
3qlv.1.C22.86hetero-oligomerHHblitsX-ray3.94Å0.290.27Glutamate receptor, ionotropic kainate 2
3h6g.1.A22.86homo-dimerHHblitsX-ray2.70Å0.290.27Glutamate receptor, ionotropic kainate 2
3h6h.1.A22.86homo-dimerHHblitsX-ray2.90Å0.290.27Glutamate receptor, ionotropic kainate 2
3i23.1.A13.89homo-dimerHHblitsX-ray2.30Å0.270.28Oxidoreductase, Gfo/Idh/MocA family
4jb0.1.A12.16monomerHHblitsX-ray1.91Å0.240.29branched-chain amino acid transport system substrate-binding protein
3nkl.1.A20.29homo-dimerHHblitsX-ray1.90Å0.300.27UDP-D-quinovosamine 4-dehydrogenase
3nkl.1.B20.29homo-dimerHHblitsX-ray1.90Å0.300.27UDP-D-quinovosamine 4-dehydrogenase
1vyp.1.A9.72monomerHHblitsX-ray1.27Å0.260.28PENTAERYTHRITOL TETRANITRATE REDUCTASE
3p8j.1.A9.72monomerHHblitsX-ray1.00Å0.260.28Pentaerythritol tetranitrate reductase
5lgx.1.A9.72monomerHHblitsX-ray1.50Å0.260.28Pentaerythritol tetranitrate reductase
3obb.1.A13.70homo-tetramerHHblitsX-ray2.20Å0.250.29Probable 3-hydroxyisobutyrate dehydrogenase
3wgi.1.B13.89homo-dimerHHblitsX-ray3.25Å0.260.28Redox-sensing transcriptional repressor rex
3wg9.2.A13.89homo-dimerHHblitsX-ray1.97Å0.260.28Redox-sensing transcriptional repressor rex
3wg9.2.B13.89homo-dimerHHblitsX-ray1.97Å0.260.28Redox-sensing transcriptional repressor rex
3wgh.1.B13.89homo-dimerHHblitsX-ray2.05Å0.260.28Redox-sensing transcriptional repressor rex
3wgg.1.A13.89homo-dimerHHblitsX-ray2.10Å0.260.28Redox-sensing transcriptional repressor rex
3wgg.1.B13.89homo-dimerHHblitsX-ray2.10Å0.260.28Redox-sensing transcriptional repressor rex
3p62.1.A9.72monomerHHblitsX-ray1.40Å0.260.28Pentaerythritol tetranitrate reductase
3p8i.1.A9.72monomerHHblitsX-ray1.19Å0.260.28Pentaerythritol tetranitrate reductase
4ab4.1.A6.67monomerHHblitsX-ray1.50Å0.220.29XENOBIOTIC REDUCTASE B
3p81.1.A9.72monomerHHblitsX-ray1.20Å0.260.28Pentaerythritol tetranitrate reductase
3t8q.1.A14.29homo-dimerHHblitsX-ray2.00Å0.280.27Mandelate racemase/muconate lactonizing enzyme family protein
3ec7.1.A14.49homo-tetramerHHblitsX-ray2.15Å0.280.27Putative Dehydrogenase
3pef.1.A8.11homo-tetramerHHblitsX-ray2.07Å0.220.296-phosphogluconate dehydrogenase, NAD-binding
3pef.2.C8.11homo-tetramerHHblitsX-ray2.07Å0.220.296-phosphogluconate dehydrogenase, NAD-binding
2gf2.1.A9.72homo-dimerHHblitsX-ray2.38Å0.250.283-hydroxyisobutyrate dehydrogenase
2pge.1.A8.45monomerHHblitsX-ray1.60Å0.250.28MenC
4iyj.1.A14.71homo-dimerHHblitsX-ray1.37Å0.290.27GDSL-like protein
2i9p.1.A8.33homo-tetramerHHblitsX-ray2.55Å0.240.283-hydroxyisobutyrate dehydrogenase
3rcb.1.A10.14monomerHHblitsX-ray2.49Å0.260.27Sugar 3-ketoreductase
3p94.1.A11.76monomerHHblitsX-ray1.93Å0.270.27GDSL-like Lipase
2ho5.1.A15.15homo-dimerHHblitsX-ray2.56Å0.290.26Oxidoreductase, Gfo/Idh/MocA family
4hf7.1.A13.43homo-dimerHHblitsX-ray1.77Å0.280.26Putative acylhydrolase
1v2g.1.A17.91monomerHHblitsX-ray2.00Å0.280.26Acyl-CoA thioesterase I
3nnd.1.A14.49homo-tetramerHHblitsX-ray2.80Å0.260.27Possible substrate binding protein of ABC transporter system
4n54.1.A11.76homo-tetramerHHblitsX-ray2.05Å0.270.27Inositol dehydrogenase
4n54.1.C11.76homo-tetramerHHblitsX-ray2.05Å0.270.27Inositol dehydrogenase
4n54.1.D11.76homo-tetramerHHblitsX-ray2.05Å0.270.27Inositol dehydrogenase
4mkx.1.A11.76homo-tetramerHHblitsX-ray1.60Å0.270.27Inositol dehydrogenase
3hnp.1.A10.14homo-hexamerHHblitsX-ray2.60Å0.250.27Oxidoreductase
3hnp.1.D10.14homo-hexamerHHblitsX-ray2.60Å0.250.27Oxidoreductase
4koa.1.A7.35homo-dimerHHblitsX-ray1.93Å0.260.271,5-anhydro-D-fructose reductase
4ppy.1.A12.12homo-dimerHHblitsX-ray2.00Å0.280.26Putative acylhydrolase
2o14.1.A15.15monomerHHblitsX-ray2.10Å0.280.26Hypothetical protein yxiM
1j00.1.A20.00monomerHHblitsX-ray2.00Å0.290.25Thioesterase I
1u8u.1.A20.00monomerHHblitsX-ray2.08Å0.290.25Acyl-CoA thioesterase I
3qlt.1.A25.00homo-dimerHHblitsX-ray2.99Å0.300.25Glutamate receptor, ionotropic kainate 2
3qlu.1.B25.00hetero-oligomerHHblitsX-ray2.91Å0.300.25Glutamate receptor, ionotropic kainate 2
1yzf.1.A10.61monomerHHblitsX-ray1.90Å0.270.26lipase/acylhydrolase
3f4l.1.A11.94homo-dimerHHblitsX-ray2.00Å0.250.26Putative oxidoreductase yhhX
3rc9.1.A10.61monomerHHblitsX-ray1.91Å0.260.26Sugar 3-ketoreductase
3iht.1.A15.38homo-dimerHHblitsX-ray1.80Å0.270.25S-adenosyl-L-methionine methyl transferase
3iht.1.B15.38homo-dimerHHblitsX-ray1.80Å0.270.25S-adenosyl-L-methionine methyl transferase
3q2i.1.A15.38homo-octamerHHblitsX-ray1.50Å0.270.25dehydrogenase
4c1b.2.A9.09homo-dimerHHblitsX-ray2.50Å0.260.26ORF1-ENCODED PROTEIN
4c1b.1.B9.09homo-dimerHHblitsX-ray2.50Å0.260.26ORF1-ENCODED PROTEIN
4c1b.1.A9.09homo-dimerHHblitsX-ray2.50Å0.260.26ORF1-ENCODED PROTEIN
3q2k.1.A10.77homo-octamerHHblitsX-ray2.13Å0.270.25oxidoreductase
3q2k.1.B10.77homo-octamerHHblitsX-ray2.13Å0.270.25oxidoreductase
5b5s.1.A8.96monomerHHblitsX-ray1.50Å0.240.26Acetic acid
2ze3.1.A6.06homo-dimerHHblitsX-ray1.65Å0.240.26DFA0005
2dwu.1.A16.13homo-dimerHHblitsX-ray1.60Å0.290.24Glutamate racemase
2dwu.2.A16.13homo-dimerHHblitsX-ray1.60Å0.290.24Glutamate racemase
3ixl.1.A12.90monomerHHblitsX-ray1.45Å0.290.24Arylmalonate decarboxylase
2gzm.1.A14.52homo-dimerHHblitsX-ray1.99Å0.280.24Glutamate racemase
2gzm.1.B14.52homo-dimerHHblitsX-ray1.99Å0.280.24Glutamate racemase
2gzm.2.B14.52homo-dimerHHblitsX-ray1.99Å0.280.24Glutamate racemase
4nas.1.A9.68homo-dimerHHblitsX-ray1.92Å0.270.24Ribulose-bisphosphate carboxylase
4u63.1.A9.52monomerHHblitsX-ray1.67Å0.250.25DNA photolyase
4r9x.1.A13.11homo-dimerHHblitsX-ray1.85Å0.270.24Copper homeostasis protein CutC
4r9x.1.B13.11homo-dimerHHblitsX-ray1.85Å0.270.24Copper homeostasis protein CutC
3qvj.1.A5.00homo-hexamerHHblitsX-ray2.10Å0.280.24Putative hydantoin racemase
3qvl.1.A3.33homo-hexamerHHblitsX-ray1.82Å0.270.24Putative hydantoin racemase
2vvt.1.A12.07homo-dimerHHblitsX-ray1.65Å0.280.23GLUTAMATE RACEMASE
2vvt.1.B12.07homo-dimerHHblitsX-ray1.65Å0.280.23GLUTAMATE RACEMASE
2p2f.1.A8.06monomerHHblitsX-ray2.58Å0.230.24Acetyl-coenzyme A synthetase
1pg3.1.A8.06monomerHHblitsX-ray2.30Å0.230.24acetyl-CoA synthetase
1b73.1.A19.30homo-dimerHHblitsX-ray2.30Å0.290.22GLUTAMATE RACEMASE
2jfw.1.A15.79homo-dimerHHblitsX-ray2.00Å0.290.22GLUTAMATE RACEMASE
2eq5.1.A14.04homo-dimerHHblitsX-ray2.20Å0.280.22228aa long hypothetical hydantoin racemase
2eq5.2.B14.04homo-dimerHHblitsX-ray2.20Å0.280.22228aa long hypothetical hydantoin racemase
2jfq.1.A8.62homo-dimerHHblitsX-ray2.15Å0.260.23GLUTAMATE RACEMASE
2jfq.1.B8.62homo-dimerHHblitsX-ray2.15Å0.260.23GLUTAMATE RACEMASE
3uho.1.A12.28monomerHHblitsX-ray2.20Å0.270.22Glutamate racemase
3uhf.2.A12.28monomerHHblitsX-ray1.83Å0.270.22Glutamate racemase
3uhp.1.A12.28monomerHHblitsX-ray2.79Å0.270.22Glutamate racemase
4rfv.1.A17.54homo-dimerHHblitsX-ray1.69Å0.260.22Bifunctional enzyme CysN/CysC
3noy.1.A14.55homo-dimerHHblitsX-ray2.70Å0.280.224-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
3noy.2.A14.55homo-dimerHHblitsX-ray2.70Å0.280.224-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1wau.1.A16.07homo-trimerHHblitsX-ray2.80Å0.260.22KHG/KDPG ALDOLASE
1wbh.1.A16.07homo-trimerHHblitsX-ray1.55Å0.260.22KHG/KDPG ALDOLASE
2xec.1.A15.09homo-dimerHHblitsX-ray2.20Å0.300.21PUTATIVE MALEATE ISOMERASE
2p2m.1.A6.90monomerHHblitsX-ray2.11Å0.230.23Acetyl-coenzyme A synthetase
4ix1.1.A5.36homo-dimerHHblitsX-ray2.80Å0.250.22hypothetical protein
4ix1.1.B5.36homo-dimerHHblitsX-ray2.80Å0.250.22hypothetical protein
1sev.1.A8.77homo-dimerHHblitsX-ray2.55Å0.230.22Malate dehydrogenase, glyoxysomal precursor
2dgd.1.A13.21homo-octamerHHblitsX-ray2.90Å0.290.21223aa long hypothetical arylmalonate decarboxylase
1fq0.1.A16.36homo-trimerHHblitsX-ray2.10Å0.260.22KDPG ALDOLASE
1eua.1.C16.36homo-trimerHHblitsX-ray1.95Å0.260.22KDPG ALDOLASE
2xed.1.A13.46monomerHHblitsX-ray1.95Å0.290.20PUTATIVE MALEATE ISOMERASE
4fq7.1.A9.62homo-tetramerHHblitsX-ray3.00Å0.290.20Maleate cis-trans isomerase
2yw4.1.A10.91homo-trimerHHblitsX-ray2.53Å0.240.224-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase
1smk.1.B8.93homo-dimerHHblitsX-ray2.50Å0.230.22Malate dehydrogenase, glyoxysomal
1smk.1.A8.93homo-dimerHHblitsX-ray2.50Å0.230.22Malate dehydrogenase, glyoxysomal
1smk.2.A8.93homo-dimerHHblitsX-ray2.50Å0.230.22Malate dehydrogenase, glyoxysomal
1smk.2.B8.93homo-dimerHHblitsX-ray2.50Å0.230.22Malate dehydrogenase, glyoxysomal
1smk.3.B8.93homo-dimerHHblitsX-ray2.50Å0.230.22Malate dehydrogenase, glyoxysomal
1smk.4.A8.93homo-dimerHHblitsX-ray2.50Å0.230.22Malate dehydrogenase, glyoxysomal
1smk.4.B8.93homo-dimerHHblitsX-ray2.50Å0.230.22Malate dehydrogenase, glyoxysomal
1yht.1.A7.55monomerHHblitsX-ray2.00Å0.260.21DspB
4a3u.1.A9.09monomerHHblitsX-ray1.70Å0.240.22NADH\:FLAVIN OXIDOREDUCTASE/NADH OXIDASE
2jfy.1.B7.55homo-dimerHHblitsX-ray1.90Å0.260.21GLUTAMATE RACEMASE
2jfz.1.A7.55homo-dimerHHblitsX-ray1.86Å0.260.21GLUTAMATE RACEMASE
2jfx.1.A7.55homo-dimerHHblitsX-ray2.30Å0.260.21GLUTAMATE RACEMASE
2jfx.1.B7.55homo-dimerHHblitsX-ray2.30Å0.260.21GLUTAMATE RACEMASE
2jfy.1.A7.55homo-dimerHHblitsX-ray1.90Å0.260.21GLUTAMATE RACEMASE
4b1f.1.B7.55homo-dimerHHblitsX-ray2.05Å0.260.21GLUTAMATE RACEMASE
2w4i.1.A7.55homo-tetramerHHblitsX-ray1.87Å0.260.21GLUTAMATE RACEMASE
2q3r.1.A15.09monomerHHblitsX-ray2.00Å0.260.2112-oxophytodienoate reductase 1
4mwa.1.A15.69homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.B15.69homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.C15.69homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.D15.69homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.B15.69homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.D15.69homo-tetramerHHblitsX-ray1.85Å0.290.204-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4bk9.1.A17.31homo-trimerHHblitsX-ray2.77Å0.270.202-DEHYDRO-3-DEOXYPHOSPHOGLUCONATE ALDOLASE/4-HYDROXY-2-OXO GLUTARATE ALDOLASE
3bol.1.A15.69homo-dimerHHblitsX-ray1.85Å0.280.205-methyltetrahydrofolate S-homocysteine methyltransferase
1q7m.2.A15.69monomerHHblitsX-ray2.10Å0.280.205-methyltetrahydrofolate S-homocysteine methyltransferase
1q7q.1.A15.69monomerHHblitsX-ray3.10Å0.280.205-methyltetrahydrofolate S-homocysteine methyltransferase
1q8a.2.A15.69monomerHHblitsX-ray1.70Å0.280.205-methyltetrahydrofolate S-homocysteine methyltransferase
1fwr.1.A17.31homo-trimerHHblitsX-ray2.70Å0.270.20KDPG ALDOLASE
4fq5.1.A8.00homo-tetramerHHblitsX-ray2.10Å0.290.20Maleate cis-trans isomerase
4fq5.1.B8.00homo-tetramerHHblitsX-ray2.10Å0.290.20Maleate cis-trans isomerase
4mg4.1.A14.29homo-dimerHHblitsX-ray1.70Å0.270.19Phosphonomutase
4mg4.2.B14.29homo-dimerHHblitsX-ray1.70Å0.270.19Phosphonomutase
1a96.1.A10.20homo-tetramerHHblitsX-ray2.00Å0.250.19XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
1a96.1.C10.20homo-tetramerHHblitsX-ray2.00Å0.250.19XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
1nul.1.B10.20homo-tetramerHHblitsX-ray1.80Å0.250.19XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
4jls.2.A10.20homo-tetramerHHblitsX-ray2.20Å0.250.19Xanthine phosphoribosyltransferase
1a98.1.A10.20homo-tetramerHHblitsX-ray2.25Å0.240.19XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
5aun.1.B15.22hetero-oligomerHHblitsX-ray1.63Å0.290.18ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.A15.22homo-dimerHHblitsX-ray2.10Å0.290.18ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
5auq.3.A15.22homo-dimerHHblitsX-ray2.53Å0.290.18ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
3vx3.1.B15.22homo-dimerHHblitsX-ray2.10Å0.290.18ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog
1a97.1.A10.42homo-tetramerHHblitsX-ray2.60Å0.250.19XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
2bq8.1.A10.64monomerHHblitsX-ray2.20Å0.250.18TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
1war.1.A10.64monomerHHblitsX-ray2.22Å0.250.18HUMAN PURPLE ACID PHOSPHATASE
3ef6.1.A27.50monomerHHblitsX-ray1.80Å0.350.16Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase
4emi.1.A27.50monomerHHblitsX-ray1.81Å0.350.16TodA
4emj.1.A27.50hetero-oligomerHHblitsX-ray2.40Å0.350.16TodA
1iu9.1.A19.51monomerHHblitsX-ray2.04Å0.330.16aspartate racemase
4v4b.1.Z18.60hetero-oligomerHHblitsEMNA0.280.1760S ribosomal protein L8-A
4v7h.1.418.60hetero-oligomerHHblitsEM8.90Å0.280.1760S ribosomal protein L8(A)
3beo.1.A16.28homo-dimerHHblitsX-ray1.70Å0.270.17UDP-N-acetylglucosamine 2-epimerase
4h4r.1.A27.50homo-dimerHHblitsX-ray1.40Å0.320.16Biphenyl dioxygenase ferredoxin reductase subunit
4h4v.1.A27.50homo-dimerHHblitsX-ray1.40Å0.320.16Biphenyl dioxygenase ferredoxin reductase subunit
2yvg.1.A27.50homo-dimerHHblitsX-ray1.60Å0.320.16Ferredoxin reductase
2yvj.1.A27.50hetero-oligomerHHblitsX-ray1.90Å0.320.16Ferredoxin reductase
2yvj.1.C27.50hetero-oligomerHHblitsX-ray1.90Å0.320.16Ferredoxin reductase
1d7y.1.A27.50homo-dimerHHblitsX-ray2.10Å0.320.16FERREDOXIN REDUCTASE
4h4x.1.A27.50homo-dimerHHblitsX-ray1.50Å0.320.16Biphenyl dioxygenase ferredoxin reductase subunit
2gr3.1.A27.50homo-dimerHHblitsX-ray1.50Å0.320.16ferredoxin reductase
4h4t.1.A27.50homo-dimerHHblitsX-ray1.50Å0.320.16Biphenyl dioxygenase ferredoxin reductase subunit
4h4z.1.A27.50homo-dimerHHblitsX-ray1.95Å0.320.16Biphenyl dioxygenase ferredoxin reductase subunit
4h4p.1.A27.50homo-dimerHHblitsX-ray1.50Å0.320.16Biphenyl dioxygenase ferredoxin reductase subunit
3ics.1.A30.00homo-dimerHHblitsX-ray1.94Å0.320.16Coenzyme A-Disulfide Reductase
3noy.1.A27.50homo-dimerHHblitsX-ray2.70Å0.320.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
3noy.2.A27.50homo-dimerHHblitsX-ray2.70Å0.320.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4ocg.1.A21.95homo-dimerHHblitsX-ray2.75Å0.300.16FAD-dependent pyridine nucleotide-disulphide oxidoreductase
1jft.1.B20.51homo-dimerHHblitsX-ray2.50Å0.340.15PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
1yqz.1.A17.07homo-dimerHHblitsX-ray1.54Å0.300.16coenzyme A disulfide reductase
1nhr.1.A28.21monomerHHblitsX-ray2.10Å0.330.15NADH PEROXIDASE
1f8w.1.A28.21homo-tetramerHHblitsX-ray2.45Å0.330.15NADH PEROXIDASE
1nhp.1.A28.21monomerHHblitsX-ray2.00Å0.330.15NADH PEROXIDASE
3hay.1.D19.51hetero-oligomerHHblitsX-ray4.99Å0.290.1650S ribosomal protein L7Ae
1m90.1.H20.00hetero-oligomerHHblitsX-ray2.80Å0.310.16RIBOSOMAL PROTEIN L7AE
4nv3.1.A17.50monomerHHblitsX-ray1.09Å0.310.16Amino acid/amide ABC transporter substrate-binding protein, HAAT family
4obb.1.A17.50monomerHHblitsX-ray1.53Å0.310.16Amino acid/amide ABC transporter substrate-binding protein, HAAT family
3td9.1.A22.50homo-dimerHHblitsX-ray1.90Å0.310.16Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein
4mwa.1.A20.00homo-tetramerHHblitsX-ray1.85Å0.310.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.B20.00homo-tetramerHHblitsX-ray1.85Å0.310.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.C20.00homo-tetramerHHblitsX-ray1.85Å0.310.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.1.D20.00homo-tetramerHHblitsX-ray1.85Å0.310.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.B20.00homo-tetramerHHblitsX-ray1.85Å0.310.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
4mwa.2.D20.00homo-tetramerHHblitsX-ray1.85Å0.310.164-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
3cpq.1.A25.64homo-dimerHHblitsX-ray1.90Å0.320.1550S ribosomal protein L30e
1w3e.1.A23.08monomerHHblitsX-ray1.77Å0.320.1550S RIBOSOMAL PROTEIN L30E
3nta.1.A22.50homo-dimerHHblitsX-ray2.01Å0.300.16FAD-dependent pyridine nucleotide-disulphide oxidoreductase
3ntd.1.A22.50homo-dimerHHblitsX-ray1.99Å0.300.16FAD-dependent pyridine nucleotide-disulphide oxidoreductase
3nt6.1.A22.50homo-dimerHHblitsX-ray2.00Å0.300.16FAD-dependent pyridine nucleotide-disulphide oxidoreductase
2fc3.1.A22.50monomerHHblitsX-ray1.56Å0.300.1650S ribosomal protein L7Ae
1xbi.1.A19.51monomerHHblitsX-ray1.45Å0.280.1650S ribosomal protein L7Ae
4jb0.1.A12.50monomerHHblitsX-ray1.91Å0.300.16branched-chain amino acid transport system substrate-binding protein
3hjw.1.C20.00hetero-oligomerHHblitsX-ray2.35Å0.300.1650S ribosomal protein L7Ae
3nvi.2.B20.00hetero-oligomerHHblitsX-ray2.71Å0.300.1650S ribosomal protein L7Ae
3nmu.1.D20.00hetero-oligomerHHblitsX-ray2.73Å0.300.1650S ribosomal protein L7Ae
3nvk.1.C20.00hetero-oligomerHHblitsX-ray3.21Å0.300.1650S ribosomal protein L7Ae
3nvk.1.D20.00hetero-oligomerHHblitsX-ray3.21Å0.300.1650S ribosomal protein L7Ae
3nmu.2.B20.00hetero-oligomerHHblitsX-ray2.73Å0.300.1650S ribosomal protein L7Ae
4u56.137.A23.08monomerHHblitsX-ray3.45Å0.320.1560S ribosomal protein L30
1nmu.2.B23.08hetero-oligomerHHblitsX-ray2.31Å0.320.1560S ribosomal protein L30
1cn7.1.A23.08monomerHHblitsNMRNA0.320.1560S RIBOSOMAL PROTEIN L30E
1ck2.1.A23.08monomerHHblitsNMRNA0.320.1560S RIBOSOMAL PROTEIN L30
1nmu.1.B23.08hetero-oligomerHHblitsX-ray2.31Å0.320.1560S ribosomal protein L30
4u4o.138.A23.08monomerHHblitsX-ray3.60Å0.320.1560S ribosomal protein L30
5dgf.62.A23.08monomerHHblitsX-ray3.30Å0.320.1560S ribosomal protein L30
5mei.70.A23.08monomerHHblitsX-ray3.50Å0.320.1560S ribosomal protein L30
5m1j.39.A23.08monomerHHblitsEM3.30Å0.320.1560S ribosomal protein L30
5fs9.1.A12.50monomerHHblitsX-ray1.75Å0.300.16APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
4fdc.1.A12.50monomerHHblitsX-ray2.40Å0.300.16Apoptosis-inducing factor 1, mitochondrial
5fs6.1.A12.50monomerHHblitsX-ray1.90Å0.300.16APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
4lii.1.A12.50monomerHHblitsX-ray1.88Å0.300.16Apoptosis-inducing factor 1, mitochondrial
5fs7.1.A12.50monomerHHblitsX-ray1.85Å0.300.16APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
5fs8.1.A12.50monomerHHblitsX-ray1.40Å0.300.16APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
5fmh.1.A12.50monomerHHblitsX-ray1.80Å0.300.16APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL
1m6i.1.A12.50monomerHHblitsX-ray1.80Å0.300.16Programmed cell death protein 8
5lyb.41.A17.50monomerHHblitsX-ray3.25Å0.300.1660S ribosomal protein L8-A
5tga.116.A17.50monomerHHblitsX-ray3.30Å0.300.1660S ribosomal protein L8-A
5m1j.47.A17.50monomerHHblitsEM3.30Å0.300.1660S ribosomal protein L8-A
3cge.1.A9.76homo-dimerHHblitsX-ray2.26Å0.270.16Pyridine nucleotide-disulfide oxidoreductase, class I
4x2r.1.A17.50monomerHHblitsX-ray1.05Å0.290.161-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
3lb8.1.A20.51hetero-oligomerHHblitsX-ray2.60Å0.310.15Putidaredoxin reductase
3lb8.2.A20.51hetero-oligomerHHblitsX-ray2.60Å0.310.15Putidaredoxin reductase
3i09.1.A17.95monomerHHblitsX-ray1.80Å0.310.15Periplasmic branched-chain amino acid-binding protein
4kv7.1.A15.38monomerHHblitsX-ray1.20Å0.310.15Probable leucine/isoleucine/valine-binding protein
3kd9.1.A12.50homo-dimerHHblitsX-ray2.75Å0.290.16Coenzyme A disulfide reductase
4fx9.1.A12.50homo-dimerHHblitsX-ray2.70Å0.290.16Coenzyme A disulfide reductase
3sg0.1.A17.95monomerHHblitsX-ray1.20Å0.300.15Extracellular ligand-binding receptor
3paf.1.A20.00monomerHHblitsX-ray1.70Å0.280.1650S ribosomal protein L7Ae
3paf.2.A20.00monomerHHblitsX-ray1.70Å0.280.1650S ribosomal protein L7Ae
4eqr.1.A17.95homo-dimerHHblitsX-ray1.80Å0.300.15Coenzyme A disulfide reductase
4bur.1.A12.82monomerHHblitsX-ray2.88Å0.300.15APOPTOSIS INDUCING FACTOR 1, MITOCHONDRIAL
4bur.3.A12.82monomerHHblitsX-ray2.88Å0.300.15APOPTOSIS INDUCING FACTOR 1, MITOCHONDRIAL
5kvi.1.A12.82monomerHHblitsX-ray2.00Å0.300.15Apoptosis-inducing factor 1, mitochondrial
1gv4.1.A12.82monomerHHblitsX-ray2.00Å0.300.15PROGRAMED CELL DEATH PROTEIN 8
3gd4.1.A12.82homo-dimerHHblitsX-ray2.24Å0.300.15Apoptosis-inducing factor 1, mitochondrial
3gd4.1.B12.82homo-dimerHHblitsX-ray2.24Å0.300.15Apoptosis-inducing factor 1, mitochondrial
3gd3.1.A12.82monomerHHblitsX-ray2.95Å0.300.15Apoptosis-inducing factor 1, mitochondrial
3gd3.2.A12.82monomerHHblitsX-ray2.95Å0.300.15Apoptosis-inducing factor 1, mitochondrial
3gd3.4.A12.82monomerHHblitsX-ray2.95Å0.300.15Apoptosis-inducing factor 1, mitochondrial
5kvh.1.A12.82homo-dimerHHblitsX-ray2.27Å0.300.15Apoptosis-inducing factor 1, mitochondrial
5miu.1.A12.82monomerHHblitsX-ray3.50Å0.300.15Apoptosis-inducing factor 1, mitochondrial
5miv.1.A12.82homo-dimerHHblitsX-ray3.10Å0.300.15Apoptosis-inducing factor 1, mitochondrial
5miv.1.B12.82homo-dimerHHblitsX-ray3.10Å0.300.15Apoptosis-inducing factor 1, mitochondrial
4evs.1.A15.38monomerHHblitsX-ray1.45Å0.300.15PUTATIVE ABC TRANSPORTER SUBUNIT, SUBSTRATE-BINDING COMPONENT
3pla.1.C23.08hetero-oligomerHHblitsX-ray3.15Å0.300.1550S ribosomal protein L7Ae
5jpq.1.U23.08hetero-oligomerHHblitsEMNA0.300.15Snu13
2v3a.1.A10.00monomerHHblitsX-ray2.40Å0.280.16RUBREDOXIN REDUCTASE
2v3b.1.A10.00hetero-oligomerHHblitsX-ray2.45Å0.280.16RUBREDOXIN REDUCTASE
1rlg.1.B15.00monomerHHblitsX-ray2.70Å0.280.1650S ribosomal protein L7Ae
1rlg.2.B15.00monomerHHblitsX-ray2.70Å0.280.1650S ribosomal protein L7Ae
3ukj.1.A12.82monomerHHblitsX-ray1.60Å0.300.15Extracellular ligand-binding receptor
3n0x.1.A20.00monomerHHblitsX-ray1.50Å0.280.16Possible substrate binding protein of ABC transporter system
2czw.1.A17.95monomerHHblitsX-ray1.90Å0.300.1550S ribosomal protein L7Ae
2cdu.1.A15.38homo-dimerHHblitsX-ray1.80Å0.290.15NADPH OXIDASE
3iwa.1.A12.50homo-dimerHHblitsX-ray2.30Å0.270.16FAD-dependent pyridine nucleotide-disulphide oxidoreductase
4by9.1.D17.95hetero-oligomerHHblitsNMRNA0.290.1550S RIBOSOMAL PROTEIN L7AE
4by9.1.G17.95hetero-oligomerHHblitsNMRNA0.290.1550S RIBOSOMAL PROTEIN L7AE
4by9.1.J17.95hetero-oligomerHHblitsNMRNA0.290.1550S RIBOSOMAL PROTEIN L7AE
4by9.1.M17.95hetero-oligomerHHblitsNMRNA0.290.1550S RIBOSOMAL PROTEIN L7AE
5dcv.1.A17.95monomerHHblitsX-ray3.40Å0.290.1550S ribosomal protein L7Ae
5dcv.2.A17.95monomerHHblitsX-ray3.40Å0.290.1550S ribosomal protein L7Ae
4lck.1.A15.38monomerHHblitsX-ray3.20Å0.290.15Ribosomal protein YbxF
4lck.2.A15.38monomerHHblitsX-ray3.20Å0.290.15Ribosomal protein YbxF
3v7e.1.A15.38monomerHHblitsX-ray2.80Å0.290.15Ribosome-associated protein L7Ae-like
4tzz.2.A15.38monomerHHblitsX-ray3.64Å0.290.15Ribosome-associated protein L7Ae-like
4tzp.2.A15.38monomerHHblitsX-ray8.50Å0.290.15Ribosome-associated protein L7Ae-like
4tzw.1.A15.38monomerHHblitsX-ray4.67Å0.290.15Ribosome-associated protein L7Ae-like
3cgb.1.A7.50homo-dimerHHblitsX-ray1.90Å0.270.16Pyridine nucleotide-disulfide oxidoreductase, class I
3tdn.1.A4.88homo-dimerHHblitsX-ray1.40Å0.250.16FLR SYMMETRIC ALPHA-BETA TIM BARREL
4mlc.1.A15.00monomerHHblitsX-ray2.71Å0.260.16Extracellular ligand-binding receptor
4q6b.1.A15.00monomerHHblitsX-ray1.67Å0.260.16Extracellular ligand-binding receptor
1vzw.1.A17.95monomerHHblitsX-ray1.80Å0.280.15PHOSPHORIBOSYL ISOMERASE A
2vep.1.A17.95monomerHHblitsX-ray1.80Å0.280.15PHOSPHORIBOSYL ISOMERASE A
3n0w.1.A15.38monomerHHblitsX-ray1.88Å0.280.15ABC branched chain amino acid family transporter, periplasmic ligand binding protein
3h5l.1.A12.82monomerHHblitsX-ray1.70Å0.280.15putative Branched-chain amino acid ABC transporter
3hyv.1.A21.05homo-trimerHHblitsX-ray2.30Å0.300.15Sulfide-quinone reductase
5er0.1.A18.42homo-dimerHHblitsX-ray2.41Å0.290.15NADH oxidase
5voh.1.A18.42homo-tetramerHHblitsX-ray2.30Å0.290.15NADH oxidase
5l1n.1.A13.16homo-dimerHHblitsX-ray3.60Å0.290.15Coenzyme A disulfide reductase
1qnl.1.A7.50homo-tetramerHHblitsX-ray2.70Å0.240.16ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN
4ys6.1.A16.22monomerHHblitsX-ray1.70Å0.300.15Putative solute-binding component of ABC transporter
2x30.1.A18.42monomerHHblitsX-ray1.95Å0.280.15PHOSPHORIBOSYL ISOMERASE A
3ipc.1.A10.53monomerHHblitsX-ray1.30Å0.280.15ABC transporter, substrate binding protein (Amino acid)
4qwv.1.A10.26monomerHHblitsX-ray2.45Å0.260.15High-affinity leucine-specific transport system periplasmic binding protein, Chemotaxis protein CheY
4eyk.1.A13.16monomerHHblitsX-ray1.90Å0.280.15Twin-arginine translocation pathway signal
3ipa.1.A10.53monomerHHblitsX-ray1.55Å0.280.15ABC transporter, substrate binding protein (Amino acid)
3qlt.1.A10.26homo-dimerHHblitsX-ray2.99Å0.260.15Glutamate receptor, ionotropic kainate 2
3qlu.1.B10.26hetero-oligomerHHblitsX-ray2.91Å0.260.15Glutamate receptor, ionotropic kainate 2
4q6w.1.A7.89monomerHHblitsX-ray1.84Å0.270.15Putative leu/ile/val-binding protein
4f06.1.A16.22monomerHHblitsX-ray1.30Å0.290.15Extracellular ligand-binding receptor
4f06.1.A5.26monomerHHblitsX-ray1.30Å0.260.15Extracellular ligand-binding receptor
4evq.1.A16.22monomerHHblitsX-ray1.40Å0.280.15Putative ABC transporter subunit, substrate-binding component
1usi.1.A10.53monomerHHblitsX-ray1.80Å0.260.15LEUCINE-SPECIFIC BINDING PROTEIN
1usg.1.A10.53homo-dimerHHblitsX-ray1.53Å0.260.15LEUCINE-SPECIFIC BINDING PROTEIN
2lbp.1.A10.53monomerHHblitsX-ray2.40Å0.260.15LEUCINE-BINDING PROTEIN
3olz.1.A5.13homo-tetramerHHblitsX-ray2.75Å0.240.15Glutamate receptor, ionotropic kainate 3
3olz.1.B5.13homo-tetramerHHblitsX-ray2.75Å0.240.15Glutamate receptor, ionotropic kainate 3
3i45.1.A10.53monomerHHblitsX-ray1.36Å0.260.15Twin-arginine translocation pathway signal protein
4nv3.1.A16.22monomerHHblitsX-ray1.09Å0.280.15Amino acid/amide ABC transporter substrate-binding protein, HAAT family
1z16.1.A10.53monomerHHblitsX-ray1.72Å0.260.15Leu/Ile/Val-binding protein
1z15.1.A10.53monomerHHblitsX-ray1.70Å0.260.15Leu/Ile/Val-binding protein
2liv.1.A10.53monomerHHblitsX-ray2.40Å0.260.15LEUCINE
3ukj.1.A10.53monomerHHblitsX-ray1.60Å0.250.15Extracellular ligand-binding receptor
4n0q.1.A13.51monomerHHblitsX-ray2.30Å0.270.15Leu/Ile/Val-binding protein homolog 3
3uk0.1.A10.53monomerHHblitsX-ray1.49Å0.250.15Extracellular ligand-binding receptor
3saj.1.A2.50homo-dimerHHblitsX-ray2.50Å0.210.16Glutamate receptor 1
3saj.1.B2.50homo-dimerHHblitsX-ray2.50Å0.210.16Glutamate receptor 1
3saj.2.A2.50homo-dimerHHblitsX-ray2.50Å0.210.16Glutamate receptor 1
3saj.2.B2.50homo-dimerHHblitsX-ray2.50Å0.210.16Glutamate receptor 1
3tx6.1.A13.51monomerHHblitsX-ray1.50Å0.260.15Putative branched-chain amino acid transport system substrate-binding protein
4maa.1.A10.81monomerHHblitsX-ray2.00Å0.260.15Putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
4dqd.1.A16.67monomerHHblitsX-ray1.60Å0.270.14Extracellular ligand-binding receptor
4maa.1.A10.53monomerHHblitsX-ray2.00Å0.230.15Putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
4evq.1.A13.89monomerHHblitsX-ray1.40Å0.270.14Putative ABC transporter subunit, substrate-binding component
4mlc.1.A8.57monomerHHblitsX-ray2.71Å0.290.14Extracellular ligand-binding receptor
4q6b.1.A8.57monomerHHblitsX-ray1.67Å0.290.14Extracellular ligand-binding receptor
3td9.1.A8.11homo-dimerHHblitsX-ray1.90Å0.240.15Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein
3sg0.1.A13.89monomerHHblitsX-ray1.20Å0.260.14Extracellular ligand-binding receptor
2lbp.1.A14.29monomerHHblitsX-ray2.40Å0.280.14LEUCINE-BINDING PROTEIN
3h5l.1.A8.33monomerHHblitsX-ray1.70Å0.250.14putative Branched-chain amino acid ABC transporter
3ipa.1.A14.29monomerHHblitsX-ray1.55Å0.270.14ABC transporter, substrate binding protein (Amino acid)
4kv7.1.A8.33monomerHHblitsX-ray1.20Å0.250.14Probable leucine/isoleucine/valine-binding protein
1nvm.1.B17.65hetero-oligomerHHblitsX-ray1.70Å0.290.13acetaldehyde dehydrogenase (acylating)
1nvm.2.B17.65hetero-oligomerHHblitsX-ray1.70Å0.290.13acetaldehyde dehydrogenase (acylating)
3ijd.1.A14.71homo-dimerHHblitsX-ray2.00Å0.280.13uncharacterized protein
3hut.1.A18.18monomerHHblitsX-ray1.93Å0.310.13putative branched-chain amino acid ABC transporter
1qo0.1.A5.71hetero-oligomerHHblitsX-ray2.25Å0.260.14AMIC
1pea.1.A5.71homo-dimerHHblitsX-ray2.10Å0.260.14AMIDASE OPERON
1qnl.1.A8.82homo-tetramerHHblitsX-ray2.70Å0.270.13ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN
5fwy.1.B8.33hetero-oligomerHHblitsX-ray2.12Å0.210.14GLUTAMATE RECEPTOR 3
2q5c.1.A12.12monomerHHblitsX-ray1.49Å0.260.13NtrC family transcriptional regulator
3ipc.1.A12.50monomerHHblitsX-ray1.30Å0.280.13ABC transporter, substrate binding protein (Amino acid)
1usi.1.A18.75monomerHHblitsX-ray1.80Å0.270.13LEUCINE-SPECIFIC BINDING PROTEIN
1usg.1.A18.75homo-dimerHHblitsX-ray1.53Å0.270.13LEUCINE-SPECIFIC BINDING PROTEIN
3o2j.1.A2.94homo-dimerHHblitsX-ray1.95Å0.230.13Glutamate receptor 2
3o2j.1.B2.94homo-dimerHHblitsX-ray1.95Å0.230.13Glutamate receptor 2
2vdc.1.G23.33hetero-oligomerHHblitsEM9.50Å0.320.12GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN
5jca.1.A25.00hetero-oligomerHHblitsX-ray1.50Å0.340.11NADH-dependent Ferredoxin:NADP Oxidoreductase (NfnI) subunit alpha
3nzg.1.A3.33homo-octamerHHblitsX-ray2.00Å0.240.12Putative racemase
2liv.1.A23.08monomerHHblitsX-ray2.40Å0.290.10LEUCINE
2uyy.1.A36.36homo-tetramerHHblitsX-ray2.50Å0.370.09N-PAC PROTEIN
4zpj.1.A8.00monomerHHblitsX-ray2.24Å0.250.10Extracellular ligand-binding receptor
4n0q.1.A13.04monomerHHblitsX-ray2.30Å0.260.09Leu/Ile/Val-binding protein homolog 3
3vcr.1.A22.73homo-trimerHHblitsX-ray1.84Å0.290.09putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase
3tq0.1.A8.70homo-dimerHHblitsX-ray1.90Å0.240.09Dihydroorotate dehydrogenase
1z16.1.A19.05monomerHHblitsX-ray1.72Å0.280.08Leu/Ile/Val-binding protein
1z15.1.A19.05monomerHHblitsX-ray1.70Å0.280.08Leu/Ile/Val-binding protein
4obb.1.A20.00monomerHHblitsX-ray1.53Å0.250.06Amino acid/amide ABC transporter substrate-binding protein, HAAT family
4rv8.1.A6.25homo-tetramerHHblitsX-ray2.05Å0.200.06Inosine-5'-monophosphate dehydrogenase